BLASTX nr result

ID: Salvia21_contig00024118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00024118
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    97   3e-31
ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula] ...    97   3e-23
emb|CBI31112.3| unnamed protein product [Vitis vinifera]               71   5e-19
ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago ...    87   1e-15
emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]    84   9e-15

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
            gi|355477385|gb|AES58588.1| Ribosomal protein S10
            [Medicago truncatula]
          Length = 1152

 Score = 97.4 bits (241), Expect(2) = 3e-31
 Identities = 63/105 (60%), Positives = 64/105 (60%), Gaps = 12/105 (11%)
 Frame = +3

Query: 117  KNGGTAL--GRRRSKKRRLPQLKEGALEAYLXXXXXXXXXXXXXXLASKPARPRGIKRSL 290
            K  GT L  GRRRSKKRRL  LK                      LASKPARPRGIKRSL
Sbjct: 1008 KREGTTLTLGRRRSKKRRLTLLK----------------------LASKPARPRGIKRSL 1045

Query: 291  PVLTWISGDGIRRPEATSSRGR----------SLATAKRLPSAKE 395
            PVLTWISGDG RRPE TSSRGR          SLATAKRLPSAK+
Sbjct: 1046 PVLTWISGDGKRRPEVTSSRGRSLALGDRLAVSLATAKRLPSAKD 1090



 Score = 62.8 bits (151), Expect(2) = 3e-31
 Identities = 30/32 (93%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
 Frame = +1

Query: 28   GKRSPEYSTRSPF-LAAMGSTCEQGKPNGNQK 120
            GKRSPEYSTRSPF LAAMGSTC+QGKPNGNQK
Sbjct: 977  GKRSPEYSTRSPFFLAAMGSTCKQGKPNGNQK 1008


>ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477460|gb|AES58663.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 159

 Score = 97.4 bits (241), Expect(2) = 3e-23
 Identities = 63/105 (60%), Positives = 64/105 (60%), Gaps = 12/105 (11%)
 Frame = +3

Query: 117 KNGGTAL--GRRRSKKRRLPQLKEGALEAYLXXXXXXXXXXXXXXLASKPARPRGIKRSL 290
           K  GT L  GRRRSKKRRL  LK                      LASKPARPRGIKRSL
Sbjct: 15  KREGTTLTLGRRRSKKRRLTLLK----------------------LASKPARPRGIKRSL 52

Query: 291 PVLTWISGDGIRRPEATSSRGR----------SLATAKRLPSAKE 395
           PVLTWISGDG RRPE TSSRGR          SLATAKRLPSAK+
Sbjct: 53  PVLTWISGDGKRRPEVTSSRGRSLALGDRLAVSLATAKRLPSAKD 97



 Score = 35.8 bits (81), Expect(2) = 3e-23
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +1

Query: 76  MGSTCEQGKPNGNQK 120
           MGSTC+QGKPNGNQK
Sbjct: 1   MGSTCKQGKPNGNQK 15


>emb|CBI31112.3| unnamed protein product [Vitis vinifera]
          Length = 2099

 Score = 71.2 bits (173), Expect(2) = 5e-19
 Identities = 40/67 (59%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
 Frame = +1

Query: 28   GKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGVPHWAEDDPKSEGSPS*RKELWKLT-- 201
            GKRSPEYSTRSPFLAAMGSTCEQGKPNGNQK G     +   +   +       + LT  
Sbjct: 1780 GKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKMGGYRIGQKTIQKAKAHPAEGRSFDLTPL 1839

Query: 202  LLLKGER 222
            LL KGER
Sbjct: 1840 LLFKGER 1846



 Score = 47.8 bits (112), Expect(2) = 5e-19
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +3

Query: 246  LASKPARPRGIKRSLPVLTWIS 311
            LASKPARPRGIKRSLPVLTWIS
Sbjct: 1858 LASKPARPRGIKRSLPVLTWIS 1879


>ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago truncatula]
           gi|355477358|gb|AES58561.1| hypothetical protein
           MTR_1g005810 [Medicago truncatula]
          Length = 146

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/60 (80%), Positives = 48/60 (80%), Gaps = 10/60 (16%)
 Frame = -3

Query: 391 FALGKRFAVAKL----------RPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASY 242
           FALGKRFAVAKL          RPRLLV SGRL PSPEIQVSTGKDLLIPRGRAGLEASY
Sbjct: 20  FALGKRFAVAKLTASLSPRAKLRPRLLVTSGRLFPSPEIQVSTGKDLLIPRGRAGLEASY 79


>emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]
          Length = 267

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/45 (95%), Positives = 43/45 (95%)
 Frame = -3

Query: 376 RFAVAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASY 242
           RF  AKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASY
Sbjct: 35  RFRRAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASY 79


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