BLASTX nr result

ID: Salvia21_contig00023491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00023491
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...    58   7e-07

>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Vitis vinifera]
          Length = 569

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
 Frame = -2

Query: 310 WARENLDFKPDIAARCELTRILFGSELSKLGKPILNSIVLDYPPAKIV-SLFQPRRNADF 134
           W R NL F+PD+AA  ++ RI   S L +  K IL+S++     + +V S+ Q  R  D 
Sbjct: 83  WVRTNLGFQPDLAAHSQIIRISIQSGLFQPAKGILDSLIETQKVSVLVDSVIQACRGKDS 142

Query: 133 QNISPVLNHVIECYYSEQMYFQSLEFYLMVRKNGVRLSVDASN 5
           +  SPVL  V+ECY S+ ++ ++LE +  +  +G   SV + N
Sbjct: 143 E--SPVLGFVLECYSSKGLFIEALEVFRRITIHGYVPSVRSCN 183


>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
 Frame = -2

Query: 310 WARENLDFKPDIAARCELTRILFGSELSKLGKPILNSIVLDYPPAKIV-SLFQPRRNADF 134
           WA+ NL+F PD+ ++C + ++  GS+L +  K IL+S++  YP    + ++ Q  R    
Sbjct: 104 WAKTNLNFNPDLKSQCHVIQLSLGSDLPRAAKKILDSLIKTYPSNLFLETMVQACRGK-- 161

Query: 133 QNISPVLNHVIECYYSEQMYFQSLEFYLMVRKNGVRLSVDASN 5
            ++   LN V+E Y  +  + + LE Y  +R  G   SV A N
Sbjct: 162 SSLLCTLNFVLEFYSHKGSFLEGLEVYKKMRVIGCTPSVHACN 204


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