BLASTX nr result

ID: Salvia21_contig00023272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00023272
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36896.3| unnamed protein product [Vitis vinifera]              125   3e-27
ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...   125   3e-27
ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helica...   121   7e-26
ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helica...   120   2e-25
ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h...   118   6e-25

>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/108 (53%), Positives = 78/108 (72%)
 Frame = +1

Query: 4    PTFXXXXXXXXXXXXXIKDDSTRVAVFSYSFLDGQILPCLKAVRKFMAASPATMLKPEAW 183
            PTF             I D++ RV+VF+Y+ L+GQ+LPCL +VRK+MAA PA++L+PEA 
Sbjct: 958  PTFGPHLWRLPLHGVPISDNAQRVSVFAYALLEGQVLPCLGSVRKYMAAPPASILRPEAL 1017

Query: 184  GLKRVGNLLSKLNTKGRVVDTCAKLRKVWKENPRELFPEIQDWFQEGF 327
            G +RVGNLLSKL ++ + +D+C  LR+ W+ENPREL  EI DWFQE F
Sbjct: 1018 GQRRVGNLLSKLKSRPKTIDSCLMLREAWRENPRELHSEILDWFQETF 1065


>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/108 (53%), Positives = 78/108 (72%)
 Frame = +1

Query: 4    PTFXXXXXXXXXXXXXIKDDSTRVAVFSYSFLDGQILPCLKAVRKFMAASPATMLKPEAW 183
            PTF             I D++ RV+VF+Y+ L+GQ+LPCL +VRK+MAA PA++L+PEA 
Sbjct: 1274 PTFGPHLWRLPLHGVPISDNAQRVSVFAYALLEGQVLPCLGSVRKYMAAPPASILRPEAL 1333

Query: 184  GLKRVGNLLSKLNTKGRVVDTCAKLRKVWKENPRELFPEIQDWFQEGF 327
            G +RVGNLLSKL ++ + +D+C  LR+ W+ENPREL  EI DWFQE F
Sbjct: 1334 GQRRVGNLLSKLKSRPKTIDSCLMLREAWRENPRELHSEILDWFQETF 1381


>ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helicase DHR1-like [Glycine
            max]
          Length = 1380

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/108 (55%), Positives = 76/108 (70%)
 Frame = +1

Query: 4    PTFXXXXXXXXXXXXXIKDDSTRVAVFSYSFLDGQILPCLKAVRKFMAASPATMLKPEAW 183
            PTF             I +D  RV VF+Y+ L+GQ+ PCLK+VRK+M+A+P +++K EA 
Sbjct: 1236 PTFGRFCWELPKHSLSISNDEHRVQVFAYALLEGQVCPCLKSVRKYMSAAPESIMKREAL 1295

Query: 184  GLKRVGNLLSKLNTKGRVVDTCAKLRKVWKENPRELFPEIQDWFQEGF 327
            G KRVGNLLSKL  K R++D+ A LR VWKENPRELF EI DWFQ+ F
Sbjct: 1296 GQKRVGNLLSKL--KSRLIDSSAMLRMVWKENPRELFSEILDWFQQSF 1341


>ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Glycine
            max]
          Length = 1403

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/108 (54%), Positives = 76/108 (70%)
 Frame = +1

Query: 4    PTFXXXXXXXXXXXXXIKDDSTRVAVFSYSFLDGQILPCLKAVRKFMAASPATMLKPEAW 183
            PTF             I +D  +V VF+Y+ L+GQ+ PCLK+VRK+M+A P +++K EA+
Sbjct: 1260 PTFGRFCWELPKHSLPISNDEHQVQVFAYALLEGQVCPCLKSVRKYMSAPPESIMKREAF 1319

Query: 184  GLKRVGNLLSKLNTKGRVVDTCAKLRKVWKENPRELFPEIQDWFQEGF 327
            G KRVGNLLSKL  K R++D+ A LR VWKENPRELF EI DWFQ+ F
Sbjct: 1320 GQKRVGNLLSKL--KSRLIDSSAMLRMVWKENPRELFSEILDWFQQSF 1365


>ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
            truncatula] gi|355506130|gb|AES87272.1| Pre-mRNA-splicing
            factor ATP-dependent RNA helicase PRP16 [Medicago
            truncatula]
          Length = 1331

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/108 (53%), Positives = 76/108 (70%)
 Frame = +1

Query: 4    PTFXXXXXXXXXXXXXIKDDSTRVAVFSYSFLDGQILPCLKAVRKFMAASPATMLKPEAW 183
            PTF             I +   RV VF+Y+ L+GQ+ PCLK VRK+M+A P T+L+ E++
Sbjct: 1186 PTFGRFCWELPKHSIPISNVEHRVQVFAYALLEGQVCPCLKTVRKYMSAPPETILRRESF 1245

Query: 184  GLKRVGNLLSKLNTKGRVVDTCAKLRKVWKENPRELFPEIQDWFQEGF 327
            G KRVGNL+SKLN+  R++D+ A LR VWK+NPRELF EI DWFQ+GF
Sbjct: 1246 GQKRVGNLISKLNS--RLIDSSATLRIVWKQNPRELFSEILDWFQQGF 1291


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