BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00022329
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ08511.1| RNA polymerase II largest subunit [Zamia muricata]     277   7e-73
gb|AAR05863.1| RNA polymerase II largest subunit [Cycas revoluta]     276   1e-72
gb|AAS79687.1| RNA polymerase II large subunit [Ginkgo biloba]        276   1e-72
gb|AAY89349.1| RNA polymerase II largest subunit [Antirrhinum ma...   276   1e-72
gb|AAR05865.1| RNA polymerase II largest subunit [Ginkgo biloba]      276   1e-72

>gb|AAQ08511.1| RNA polymerase II largest subunit [Zamia muricata]
          Length = 1013

 Score =  277 bits (708), Expect = 7e-73
 Identities = 127/141 (90%), Positives = 136/141 (96%)
 Frame = +2

Query: 2   SNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGK 181
           SNRPVMGIVQDTLLGCRKITKRDTFI+KDVFMNILMWWEDFDGK+P+PTILKP+PLWTGK
Sbjct: 451 SNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPSPTILKPRPLWTGK 510

Query: 182 QVFNLIIPRQINLLRYSSWHQETENGFITPGDTQVRIEKGELLSGNLCKKTLGSSSGSLI 361
           QVFNLIIPRQINL+RYS+WH E+E GFITPGDT VRIEKGE+LSG LCKKTLG+SSGSLI
Sbjct: 511 QVFNLIIPRQINLIRYSAWHSESETGFITPGDTVVRIEKGEVLSGTLCKKTLGTSSGSLI 570

Query: 362 HVIWEEVGPDAARNFLGHTQW 424
           HVIWEEVGPDAAR FLGHTQW
Sbjct: 571 HVIWEEVGPDAARKFLGHTQW 591


>gb|AAR05863.1| RNA polymerase II largest subunit [Cycas revoluta]
          Length = 280

 Score =  276 bits (707), Expect = 1e-72
 Identities = 127/141 (90%), Positives = 136/141 (96%)
 Frame = +2

Query: 2   SNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGK 181
           SNRPVMGIVQDTLLGCRKITKRDTFI+KDVFMNILMWWEDFDGK+P+PTILKP+PLWTGK
Sbjct: 29  SNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPSPTILKPRPLWTGK 88

Query: 182 QVFNLIIPRQINLLRYSSWHQETENGFITPGDTQVRIEKGELLSGNLCKKTLGSSSGSLI 361
           QVFNLIIPRQINL+RYS+WH E+E GFITPGDT VRIEKGE+LSG LCKKTLG+SSGSLI
Sbjct: 89  QVFNLIIPRQINLIRYSAWHSESETGFITPGDTCVRIEKGEVLSGTLCKKTLGTSSGSLI 148

Query: 362 HVIWEEVGPDAARNFLGHTQW 424
           HVIWEEVGPDAAR FLGHTQW
Sbjct: 149 HVIWEEVGPDAARKFLGHTQW 169


>gb|AAS79687.1| RNA polymerase II large subunit [Ginkgo biloba]
          Length = 1013

 Score =  276 bits (706), Expect = 1e-72
 Identities = 126/141 (89%), Positives = 136/141 (96%)
 Frame = +2

Query: 2   SNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGK 181
           SNRPVMGIVQDTLLGCRK+TKRDTFI+KDVFMNILMWWEDFDGK+P+PTILKP+PLWTGK
Sbjct: 451 SNRPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPSPTILKPRPLWTGK 510

Query: 182 QVFNLIIPRQINLLRYSSWHQETENGFITPGDTQVRIEKGELLSGNLCKKTLGSSSGSLI 361
           QVFNLIIPRQINL+RYS+WH E+E GFITPGDT VRIEKGE+LSG LCKKTLG+SSGSLI
Sbjct: 511 QVFNLIIPRQINLIRYSAWHSESETGFITPGDTCVRIEKGEVLSGTLCKKTLGTSSGSLI 570

Query: 362 HVIWEEVGPDAARNFLGHTQW 424
           HVIWEEVGPDAAR FLGHTQW
Sbjct: 571 HVIWEEVGPDAARKFLGHTQW 591


>gb|AAY89349.1| RNA polymerase II largest subunit [Antirrhinum majus]
          Length = 780

 Score =  276 bits (706), Expect = 1e-72
 Identities = 127/141 (90%), Positives = 135/141 (95%)
 Frame = +2

Query: 2   SNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGK 181
           +NRPVMGIVQDTLLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVPAP ILKP+PLWTGK
Sbjct: 206 ANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGK 265

Query: 182 QVFNLIIPRQINLLRYSSWHQETENGFITPGDTQVRIEKGELLSGNLCKKTLGSSSGSLI 361
           QVFNLIIP+QINLLRYS+WHQE E GFITPGDTQVRIEKGELL+G LCKKTLG+ +GSLI
Sbjct: 266 QVFNLIIPKQINLLRYSAWHQEKEKGFITPGDTQVRIEKGELLTGTLCKKTLGTGTGSLI 325

Query: 362 HVIWEEVGPDAARNFLGHTQW 424
           HVIWEEVGPDAAR FLGHTQW
Sbjct: 326 HVIWEEVGPDAARKFLGHTQW 346


>gb|AAR05865.1| RNA polymerase II largest subunit [Ginkgo biloba]
          Length = 280

 Score =  276 bits (706), Expect = 1e-72
 Identities = 126/141 (89%), Positives = 136/141 (96%)
 Frame = +2

Query: 2   SNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGK 181
           SNRPVMGIVQDTLLGCRK+TKRDTFI+KDVFMNILMWWEDFDGK+P+PTILKP+PLWTGK
Sbjct: 29  SNRPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPSPTILKPRPLWTGK 88

Query: 182 QVFNLIIPRQINLLRYSSWHQETENGFITPGDTQVRIEKGELLSGNLCKKTLGSSSGSLI 361
           QVFNLIIPRQINL+RYS+WH E+E GFITPGDT VRIEKGE+LSG LCKKTLG+SSGSLI
Sbjct: 89  QVFNLIIPRQINLIRYSAWHSESETGFITPGDTCVRIEKGEVLSGTLCKKTLGTSSGSLI 148

Query: 362 HVIWEEVGPDAARNFLGHTQW 424
           HVIWEEVGPDAAR FLGHTQW
Sbjct: 149 HVIWEEVGPDAARKFLGHTQW 169