BLASTX nr result

ID: Salvia21_contig00021715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00021715
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containi...    79   4e-13
ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocar...    75   4e-12
ref|XP_002305565.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002531339.1| pentatricopeptide repeat-containing protein,...    68   9e-10

>ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
           gi|449525343|ref|XP_004169677.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/107 (41%), Positives = 62/107 (57%)
 Frame = +2

Query: 152 MAFSSCLKCHPWTXXXXXXXXXXXXPTNLITLQFSRNSAKRRSPKLSFAVSSAISNVLLS 331
           MAF+ C+KC+PW+             +N      +  S +  S   S + SS+     L 
Sbjct: 1   MAFT-CVKCYPWSLPHAPLSFSSKPISNSSIFFSASLSDQLASSSSSNSTSSSHIVHHLP 59

Query: 332 PDFTPKQLLDCLRGEEDEKSVLRLFQWASEQPNFVPALPIYEEIIGK 472
           PDFTPKQL++ LR + DE + LR+F WAS+QPNFVP+  +YEEI+ K
Sbjct: 60  PDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRK 106


>ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
 Frame = +2

Query: 152 MAFSSCLKCHPWTXXXXXXXXXXXX-------PTNLITLQFSRNSAKRRSPKLSFAVSSA 310
           MAFSSCLK +PWT                   P + +    S +   +++   SF+  S 
Sbjct: 1   MAFSSCLKWYPWTPPHTLTQPPPTLSSAHNCKPFSKLISFTSTHHHDQQAVSPSFSTLSP 60

Query: 311 ISNVLLSPDFTPKQLLDCLRGEEDEKSVLRLFQWASEQPNFVPALPIYEEIIGK 472
                L  +FTPKQL D LR + DE S+L L  WAS+QPNFVP+  IYEE++ K
Sbjct: 61  SPTTQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRK 114


>gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocarpus longan]
          Length = 763

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/107 (39%), Positives = 57/107 (53%)
 Frame = +2

Query: 152 MAFSSCLKCHPWTXXXXXXXXXXXXPTNLITLQFSRNSAKRRSPKLSFAVSSAISNVLLS 331
           M+ SSCLK +PW             PT   T   S  S +    +    +S + S+  L 
Sbjct: 1   MSLSSCLKLYPWPPPQPFLSLPRK-PTTTTTTTISFASTQHHDLQ---QLSVSASSYQLP 56

Query: 332 PDFTPKQLLDCLRGEEDEKSVLRLFQWASEQPNFVPALPIYEEIIGK 472
           P+FT  Q LD +R + DE S LRLF WAS+QPN+ P L +YEE++ K
Sbjct: 57  PNFTSSQHLDTIRRQHDETSALRLFSWASKQPNYTPTLSVYEELLAK 103


>ref|XP_002305565.1| predicted protein [Populus trichocarpa] gi|222848529|gb|EEE86076.1|
           predicted protein [Populus trichocarpa]
          Length = 757

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 44/107 (41%), Positives = 60/107 (56%)
 Frame = +2

Query: 152 MAFSSCLKCHPWTXXXXXXXXXXXXPTNLITLQFSRNSAKRRSPKLSFAVSSAISNVLLS 331
           MAF+S LK H W             PT+  TL F+  + +     L+   +SA     LS
Sbjct: 1   MAFTSTLKYHTW--FPFHHHLASHKPTSNSTLSFATTNHE----PLTTTTNSATR---LS 51

Query: 332 PDFTPKQLLDCLRGEEDEKSVLRLFQWASEQPNFVPALPIYEEIIGK 472
           P+FTP QLL  LR EED  +V+ LF WAS+QPNF P+  I++E++ K
Sbjct: 52  PNFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHK 98


>ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529061|gb|EEF31046.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 630

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 44/108 (40%), Positives = 56/108 (51%)
 Frame = +2

Query: 149 AMAFSSCLKCHPWTXXXXXXXXXXXXPTNLITLQFSRNSAKRRSPKLSFAVSSAISNVLL 328
           A +F +CLKC+P              P +      S ++       LSFA S+      L
Sbjct: 2   AFSFFTCLKCYP-----LFFPSHQHPPFSFFHKPISNST-------LSFA-STQQHTATL 48

Query: 329 SPDFTPKQLLDCLRGEEDEKSVLRLFQWASEQPNFVPALPIYEEIIGK 472
           S +FTP QLLD LR + DE + LRL  WAS+QPNF P   IYEEI+ K
Sbjct: 49  SSNFTPAQLLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRK 96


Top