BLASTX nr result

ID: Salvia21_contig00021684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00021684
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ...   111   7e-23
ref|XP_002524030.1| pentatricopeptide repeat-containing protein,...   110   9e-23
ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containi...   108   5e-22
ref|XP_003637626.1| Pentatricopeptide repeat-containing protein ...   107   8e-22
ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15

>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503316|gb|AES84519.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/101 (55%), Positives = 72/101 (71%)
 Frame = -1

Query: 305 DGVTYNTLIWGFCKCGYVEMALGLVSEMVKRGVNCDSFTCNILVKGFCDKGLLENAKLVM 126
           D VTYNT+IWGFC+ G V+   GL+SEMVKRG+  DS TCNILVKG+C  GL++ A+ VM
Sbjct: 161 DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVM 220

Query: 125 DTMSSGLVTDGTVVPRDVVGFNTLINGYCKAGEVSVGLQLI 3
             +  G VT      +DV+G NTLI+GYC+AG +S   +LI
Sbjct: 221 YNLVDGGVT------KDVIGLNTLIDGYCEAGLMSQATELI 255



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/88 (37%), Positives = 49/88 (55%)
 Frame = -1

Query: 293  YNTLIWGFCKCGYVEMALGLVSEMVKRGVNCDSFTCNILVKGFCDKGLLENAKLVMDTMS 114
            YNTLI  FC+ G    A  ++ EMVKRG++ D  T N L++G+C    +E A   + T S
Sbjct: 778  YNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKA---LKTYS 834

Query: 113  SGLVTDGTVVPRDVVGFNTLINGYCKAG 30
              +  DG  +  ++  +NTL+ G   AG
Sbjct: 835  Q-MFVDG--IAPNITTYNTLLGGLSNAG 859


>ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536757|gb|EEF38398.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1016

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/101 (55%), Positives = 71/101 (70%)
 Frame = -1

Query: 305 DGVTYNTLIWGFCKCGYVEMALGLVSEMVKRGVNCDSFTCNILVKGFCDKGLLENAKLVM 126
           D VTYNT+IWGFC+ G V  A G +S MVK+    D+ TCNILVKGFC  GL +  + +M
Sbjct: 76  DTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIM 135

Query: 125 DTMSSGLVTDGTVVPRDVVGFNTLINGYCKAGEVSVGLQLI 3
           D + SG    GT   +DV+GFNTLI+GYCKAGE+S+ L L+
Sbjct: 136 DNLVSG----GTC--KDVIGFNTLIDGYCKAGEMSLALDLV 170



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/103 (33%), Positives = 57/103 (55%)
 Frame = -1

Query: 314 VMSDGVTYNTLIWGFCKCGYVEMALGLVSEMVKRGVNCDSFTCNILVKGFCDKGLLENAK 135
           ++ + +TY  LI G+CK G +E    L+ EM ++ +N +  T + ++ G+  KG+L+ A 
Sbjct: 374 LIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAI 433

Query: 134 LVMDTMSSGLVTDGTVVPRDVVGFNTLINGYCKAGEVSVGLQL 6
            VM  M      D  ++P   V +  LI+GYCKAG+  +   L
Sbjct: 434 NVMKKM-----LDQNIIPNAYV-YAILIDGYCKAGKQEIATDL 470



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 15/105 (14%)
 Frame = -1

Query: 305 DGVTYNTLIWGFCKCGYVEMALGLVSEMVKRGVNCDSFTCNILVKGFCDKGLLENAKLVM 126
           D + +NTLI G+CK G + +AL LV  M K G+  D  + N L+ GFC +G  + AK ++
Sbjct: 146 DVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLL 205

Query: 125 DTMSSGLVTDGTV---------------VPRDVVGFNTLINGYCK 36
             +S       +V               +  D++ + T+I+ YCK
Sbjct: 206 HEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCK 250



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
 Frame = -1

Query: 305 DGVTYNTLIWGFCKCGYVEMALGLVSEMVKRGVNCDSFTCNILVKGFCDKGLLENAKLVM 126
           D +T N L+ GFC+ G  +    ++  +V  G   D    N L+ G+C  G +  A  ++
Sbjct: 111 DTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLV 170

Query: 125 DTM-SSGLVTDGTVVPRDVVGFNTLINGYCKAGEVSVGLQLI 3
           + M   GL++       D+V +NTLING+CK GE      L+
Sbjct: 171 ERMRKEGLLS-------DIVSYNTLINGFCKRGEYDKAKSLL 205



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
 Frame = -1

Query: 311  MSDGVTYNTLIWGFCKCGYVEMALGLVSEMVKRGVNCDSFTCNILVKGFCDKGLLENAKL 132
            ++D VTYN LI G+C+  +V+ AL   ++M+  GV+ +  T N+L+ G    GL+     
Sbjct: 724  VADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDE 783

Query: 131  VMDTM-SSGLVTDGTVVPRDVVGFNTLINGYCKAGEVSVGLQL 6
            + D M  +GL  D +        ++TLI+GY K G     ++L
Sbjct: 784  LFDKMKENGLNPDAST-------YDTLISGYGKIGNKKESIRL 819


>ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  108 bits (270), Expect = 5e-22
 Identities = 52/101 (51%), Positives = 68/101 (67%)
 Frame = -1

Query: 305 DGVTYNTLIWGFCKCGYVEMALGLVSEMVKRGVNCDSFTCNILVKGFCDKGLLENAKLVM 126
           D VTYNT++WGFCK G  +   GL+SEMVK+GV  DS TCNILVKG+C  GL++ A+ +M
Sbjct: 74  DHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIM 133

Query: 125 DTMSSGLVTDGTVVPRDVVGFNTLINGYCKAGEVSVGLQLI 3
             +  G       VP D +G NTL++GYC+ G VS  L L+
Sbjct: 134 GNLVGG------GVPLDAIGLNTLVDGYCEVGLVSRALDLV 168



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
 Frame = -1

Query: 305 DGVTYNTLIWGFCKCGYVEMALGLVSEMVKRGVNCDSFTCNILVKGFCDKGLLENAKLVM 126
           D +  NTL+ G+C+ G V  AL LV +  K GV  D  T N LV  FC +G L  A+ V+
Sbjct: 144 DAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVV 203

Query: 125 DTM-------SSGLVTDGTVVPRD--------VVGFNTLINGYCK 36
           + +        SG++ D  V   D        VV + TLI  YCK
Sbjct: 204 NEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCK 248



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = -1

Query: 314  VMSDGVTYNTLIWGFCKCGYVEMALGLVSEMVKRGVNCDSFTCNILVKGFCDKGLLENA- 138
            + +D VTYN LI G+C   +VE A    S+M+  G++ +  T N L++G    GL+ +A 
Sbjct: 721  ISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDAD 780

Query: 137  KLVMDTMSSGLVTDGTVVPRDVVGFNTLINGYCKAGEVSVGLQL 6
            KLV +    GLV + T        +N L++G+ + G     ++L
Sbjct: 781  KLVSEMRERGLVPNATT-------YNILVSGHGRVGNKRDSIKL 817


>ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503561|gb|AES84764.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  107 bits (268), Expect = 8e-22
 Identities = 55/101 (54%), Positives = 71/101 (70%)
 Frame = -1

Query: 305 DGVTYNTLIWGFCKCGYVEMALGLVSEMVKRGVNCDSFTCNILVKGFCDKGLLENAKLVM 126
           D VTYNT+IWGFC+ G V+   GL+SEMVKRG+  DS TCNILVKG+C  GL++ A+ VM
Sbjct: 161 DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVM 220

Query: 125 DTMSSGLVTDGTVVPRDVVGFNTLINGYCKAGEVSVGLQLI 3
             +  G VT      +DV+G NTLI+GYC+A  +S   +LI
Sbjct: 221 YNLVDGGVT------KDVIGLNTLIDGYCEAVLMSQATELI 255


>ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|222862327|gb|EEE99833.1|
           predicted protein [Populus trichocarpa]
          Length = 864

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
 Frame = -1

Query: 305 DGVTYNTLIWGFCKCGYVEMALGLVSEMVKRGVNCDSFTCNILVKGFCDKGLLENAKLVM 126
           D VTYNT IWGFC+ G      G +S MVK+    DSFTCNILVKGFC  G ++  + VM
Sbjct: 77  DTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVM 136

Query: 125 DTMSSGLVTDG--TVVPRDVVGFNTLINGYCKAGEVSVGLQL 6
           D +   +  D   T +  ++V + TLI+ YCK   +S  L L
Sbjct: 137 DNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSL 178



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
 Frame = -1

Query: 314 VMSDGVTYNTLIWGFCKCGYVEMALGLVSEMVKRGVNCDSFTCNILVKGFCDKGLLENAK 135
           + +D VTYN LI G  K  ++E AL   ++M+  GV+    T N+L+ G    GL+  A 
Sbjct: 641 ISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAY 700

Query: 134 LVMDTM-SSGLVTDGTVVPRDVVGFNTLINGYCKAG 30
            ++  M  SGL  D ++       +NTLI+G+ K G
Sbjct: 701 EILSKMKDSGLDPDASL-------YNTLISGHGKIG 729


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