BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00021655
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284465.1| PREDICTED: general transcription factor IIH ...   167   1e-39
ref|XP_002532948.1| RNA polymerase II transcription factor B sub...   151   1e-34
ref|XP_002307429.1| predicted protein [Populus trichocarpa] gi|2...   144   2e-32
ref|XP_004170865.1| PREDICTED: general transcription factor IIH ...   142   7e-32
ref|XP_004152842.1| PREDICTED: general transcription factor IIH ...   142   7e-32

>ref|XP_002284465.1| PREDICTED: general transcription factor IIH subunit 3 [Vitis
           vinifera] gi|302141830|emb|CBI19033.3| unnamed protein
           product [Vitis vinifera]
          Length = 297

 Score =  167 bits (424), Expect = 1e-39
 Identities = 92/151 (60%), Positives = 108/151 (71%), Gaps = 8/151 (5%)
 Frame = -1

Query: 472 MTPVSSKLYADDVSLLMVLIDTNPFFWNSAQSMLPFSKFLTHVLAFLNSILLLNQMNQVV 293
           M PV SKLY+DDVSLL+VL+DTNPFFW++A   LPFSKFL+HVLAFLNSILL+NQ+NQVV
Sbjct: 1   MAPVPSKLYSDDVSLLVVLLDTNPFFWSTAS--LPFSKFLSHVLAFLNSILLINQLNQVV 58

Query: 292 VIAAGYNSCGYIFDSS----DPQSQNQR----AEDLLDKLEEFVDNDQELCREQSVDGPG 137
           VIA G NSC +IFDSS    +P  +N R      +LL KLEEFV  D++L +E    G G
Sbjct: 59  VIATGCNSCNFIFDSSSVPANPNLENGRMPALCSNLLQKLEEFVTGDEKLSKEVLAAGIG 118

Query: 136 FXXXXXXXXXXLCYIQRVFRTVPLHPQPRFV 44
                      LCYIQRVFRT PLHPQPR +
Sbjct: 119 SSLLSGSLSMALCYIQRVFRTGPLHPQPRIL 149


>ref|XP_002532948.1| RNA polymerase II transcription factor B subunit, putative [Ricinus
           communis] gi|223527277|gb|EEF29432.1| RNA polymerase II
           transcription factor B subunit, putative [Ricinus
           communis]
          Length = 266

 Score =  151 bits (381), Expect = 1e-34
 Identities = 87/151 (57%), Positives = 105/151 (69%), Gaps = 8/151 (5%)
 Frame = -1

Query: 472 MTPVSSKLYADDVSLLMVLIDTNPFFWNSAQSMLPFSKFLTHVLAFLNSILLLNQMNQVV 293
           M  V SKLY+DDVSL+MVL+DTNPFFW +  S LPFS+FL+HVLAFLNSILLLNQ+NQVV
Sbjct: 1   MASVPSKLYSDDVSLVMVLLDTNPFFWTT--SSLPFSQFLSHVLAFLNSILLLNQLNQVV 58

Query: 292 VIAAGYNSCGYIFDSS---DPQSQNQRA----EDLLDKLEEFVDNDQELCR-EQSVDGPG 137
           VIA GYNSC YI+DSS   +  S   R      DLL KLE+F+  D++L + E+S     
Sbjct: 59  VIANGYNSCDYIYDSSLVMNHSSDEGRIPALYSDLLQKLEDFMIRDEKLGKGEESKRKIA 118

Query: 136 FXXXXXXXXXXLCYIQRVFRTVPLHPQPRFV 44
                      LCYIQR+FR+ PLHPQPR +
Sbjct: 119 SSLLSGSLSMALCYIQRIFRSGPLHPQPRIL 149


>ref|XP_002307429.1| predicted protein [Populus trichocarpa] gi|222856878|gb|EEE94425.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  144 bits (362), Expect = 2e-32
 Identities = 80/142 (56%), Positives = 98/142 (69%), Gaps = 8/142 (5%)
 Frame = -1

Query: 445 ADDVSLLMVLIDTNPFFWNSAQSMLPFSKFLTHVLAFLNSILLLNQMNQVVVIAAGYNSC 266
           ADDVSL++VL+DTNPFFW    S L FS+FL+HVLAF+NSILLLNQ+NQVVVIA+GYN+C
Sbjct: 1   ADDVSLVVVLLDTNPFFWTPPSS-LSFSQFLSHVLAFVNSILLLNQLNQVVVIASGYNTC 59

Query: 265 GYIFDSSDPQSQNQRAE--------DLLDKLEEFVDNDQELCREQSVDGPGFXXXXXXXX 110
            YI+DSS   SQ    +        +LL KLEEF+  D++L +EQS              
Sbjct: 60  DYIYDSSSDASQLGSEDGRMPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIKSSLLSGSLS 119

Query: 109 XXLCYIQRVFRTVPLHPQPRFV 44
             LCYIQRVFR+ PLHPQPR +
Sbjct: 120 MALCYIQRVFRSGPLHPQPRIL 141


>ref|XP_004170865.1| PREDICTED: general transcription factor IIH subunit 3-like [Cucumis
           sativus]
          Length = 187

 Score =  142 bits (357), Expect = 7e-32
 Identities = 81/152 (53%), Positives = 98/152 (64%), Gaps = 9/152 (5%)
 Frame = -1

Query: 472 MTPVSSKLYADDVSLLMVLIDTNPFFWNSAQSMLPFSKFLTHVLAFLNSILLLNQMNQVV 293
           M    SKLYADDVSLL+VL+DTNPFFW++  S LPFSKFL+HVLAFLNSIL+LNQ+N+VV
Sbjct: 1   MASAPSKLYADDVSLLVVLLDTNPFFWST--SALPFSKFLSHVLAFLNSILVLNQLNEVV 58

Query: 292 VIAAGYNSCGYIFDSSDPQSQNQRAED---------LLDKLEEFVDNDQELCREQSVDGP 140
           VI  GY SC Y+++SS     N   ED         LL  LEEFV  D++  +E    G 
Sbjct: 59  VIGTGYASCKYLYNSS--SYSNHGLEDGRMPALCTRLLKNLEEFVIGDEQSIKEDPKGGT 116

Query: 139 GFXXXXXXXXXXLCYIQRVFRTVPLHPQPRFV 44
                       LCYIQ+VFR+  LHPQPR +
Sbjct: 117 MSSLLSGSLSMALCYIQKVFRSGSLHPQPRIL 148


>ref|XP_004152842.1| PREDICTED: general transcription factor IIH subunit 3-like [Cucumis
           sativus]
          Length = 295

 Score =  142 bits (357), Expect = 7e-32
 Identities = 81/152 (53%), Positives = 98/152 (64%), Gaps = 9/152 (5%)
 Frame = -1

Query: 472 MTPVSSKLYADDVSLLMVLIDTNPFFWNSAQSMLPFSKFLTHVLAFLNSILLLNQMNQVV 293
           M    SKLYADDVSLL+VL+DTNPFFW++  S LPFSKFL+HVLAFLNSIL+LNQ+N+VV
Sbjct: 1   MASAPSKLYADDVSLLVVLLDTNPFFWST--SALPFSKFLSHVLAFLNSILVLNQLNEVV 58

Query: 292 VIAAGYNSCGYIFDSSDPQSQNQRAED---------LLDKLEEFVDNDQELCREQSVDGP 140
           VI  GY SC Y+++SS     N   ED         LL  LEEFV  D++  +E    G 
Sbjct: 59  VIGTGYASCKYLYNSS--SYSNHGLEDGRMPALCTRLLKNLEEFVIGDEQSIKEDPKGGT 116

Query: 139 GFXXXXXXXXXXLCYIQRVFRTVPLHPQPRFV 44
                       LCYIQ+VFR+  LHPQPR +
Sbjct: 117 MSSLLSGSLSMALCYIQKVFRSGSLHPQPRIL 148