BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00021644
         (1968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003571680.1| PREDICTED: protein CLP1 homolog [Brachypodiu...   376   e-162
gb|AFW66051.1| pre-mRNA cleavage complex II protein Clp1 [Zea mays]   375   e-162
gb|ACG32121.1| pre-mRNA cleavage complex II protein Clp1 [Zea mays]   375   e-162
ref|XP_002451771.1| hypothetical protein SORBIDRAFT_04g007560 [S...   375   e-162
ref|NP_001151165.1| pre-mRNA cleavage complex II protein Clp1 [Z...   373   e-161

>ref|XP_003571680.1| PREDICTED: protein CLP1 homolog [Brachypodium distachyon]
          Length = 440

 Score =  376 bits (965), Expect(2) = e-162
 Identities = 181/262 (69%), Positives = 220/262 (83%), Gaps = 3/262 (1%)
 Frame = +1

Query: 220 RQVKLDKECELRVEVGPNFPLRLRLLSGTAEIFGTEIPPEIRLTFPPGHKFAVFTWYGAM 399
           R  KLD + ELRVEV P+ PLR+RL++GTAEIFGTE+PPE  +  PP  K A+FTW+GA 
Sbjct: 18  RMFKLDPQSELRVEVPPDAPLRVRLVAGTAEIFGTELPPEGWVPVPPRSKIAIFTWHGAT 77

Query: 400 IEIDGTTETDYTADETPMISYINVHAVLDARRNRAKASP---GDSDDSQGPRVIVVGPTD 570
           +E+DG +E++YT+DETPM+ Y+N HA+LDARR RA+A+    GD + SQGPRVIVVGPTD
Sbjct: 78  VELDGVSESEYTSDETPMVIYVNTHAILDARRARARAAAAQGGDLEASQGPRVIVVGPTD 137

Query: 571 SGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVEGIPLDMPL 750
           SGKSTL +MLLSWAAKQGWKPT+VDLDIGQGSITIPGCI+ATPIE PID V+GIPL+MP+
Sbjct: 138 SGKSTLCKMLLSWAAKQGWKPTYVDLDIGQGSITIPGCISATPIEKPIDIVDGIPLEMPI 197

Query: 751 VYFHGHVTPSANVELYKVLVKELAQVLDRQFAGNVESRAAGMVINTMGWIEGVGYELLLH 930
            YF+GH  PS N ++YK L+KELAQ L+ QF+GN ESRAAGMVINTMGW+EG+GYELLL+
Sbjct: 198 AYFYGHPNPSINPDVYKALMKELAQTLETQFSGNAESRAAGMVINTMGWVEGLGYELLLN 257

Query: 931 AIDTFNATVVLVLGQVSVYSGL 996
           AI+TF A VVLVLGQ  ++  L
Sbjct: 258 AIETFKANVVLVLGQEKLWKML 279



 Score =  224 bits (571), Expect(2) = e-162
 Identities = 107/167 (64%), Positives = 132/167 (79%)
 Frame = +3

Query: 1119 QEKLWSMLRDVLKSKANVDVVKLQKSGGVVSRNAKVRQKARGSRIREYFYGPANDLSPHS 1298
            QEKLW ML+D ++SK N+DVVKL KS GVV RN+K RQK R  RI+EYFYG ANDL+PHS
Sbjct: 272  QEKLWKMLKDAVQSKPNIDVVKLHKSEGVVLRNSKYRQKTRSFRIKEYFYGIANDLAPHS 331

Query: 1299 NTANFSDLLIYRIGGGPQAPRSALPVGAEPVSDRLRVAPVSVNQDLHHLVLAVSFAKEPD 1478
            N  NFSD+ +Y+IG G QAPRSALP+GAEPV+D  R+  V+++ D+ H VLAVS+AKEPD
Sbjct: 332  NVVNFSDVSVYKIGSGHQAPRSALPIGAEPVADPTRLVAVNISTDMVHTVLAVSYAKEPD 391

Query: 1479 EIMSSNVAGFIWVTDINFESKKITYLAPSAGSLPGKYLIVGNLTWCE 1619
            EI SSNVAGFI VTD++ + KK+TY+AP  G LP + LI  +LTW E
Sbjct: 392  EISSSNVAGFIHVTDVDIQRKKLTYIAPCPGDLPSRLLIASSLTWYE 438


>gb|AFW66051.1| pre-mRNA cleavage complex II protein Clp1 [Zea mays]
          Length = 439

 Score =  375 bits (963), Expect(2) = e-162
 Identities = 181/262 (69%), Positives = 221/262 (84%), Gaps = 3/262 (1%)
 Frame = +1

Query: 220 RQVKLDKECELRVEVGPNFPLRLRLLSGTAEIFGTEIPPEIRLTFPPGHKFAVFTWYGAM 399
           RQ KL  + ELRVEV P+ PLR+RL++GTAEIFGTE+PPE  +  PP  K A+FTW+GA 
Sbjct: 18  RQYKLAPQSELRVEVLPDAPLRVRLVTGTAEIFGTELPPEGWVPVPPRSKIAIFTWHGAT 77

Query: 400 IEIDGTTETDYTADETPMISYINVHAVLDARRNRAK---ASPGDSDDSQGPRVIVVGPTD 570
           +E+DG +E++YT+DETPM+ Y+N HA+LDARR RA+   A  GD + SQGPRVIVVGPTD
Sbjct: 78  VELDGVSESEYTSDETPMVIYVNTHAILDARRARARTAAAQGGDKEASQGPRVIVVGPTD 137

Query: 571 SGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVEGIPLDMPL 750
           SGKSTL +MLLSWAAK GWKPT+VDLDIGQGSITIPGCI+ATPIE PID ++GIPL+MPL
Sbjct: 138 SGKSTLCKMLLSWAAKLGWKPTYVDLDIGQGSITIPGCISATPIEKPIDIIDGIPLEMPL 197

Query: 751 VYFHGHVTPSANVELYKVLVKELAQVLDRQFAGNVESRAAGMVINTMGWIEGVGYELLLH 930
           VYF+GH  PS N ++YKVL+KELA+ L++QF+GN ESRAAGMVINTMGW+EG+GYELLL+
Sbjct: 198 VYFYGHPNPSINADVYKVLMKELAKTLEKQFSGNAESRAAGMVINTMGWVEGLGYELLLN 257

Query: 931 AIDTFNATVVLVLGQVSVYSGL 996
           AI+TF A VVLVLGQ  ++  L
Sbjct: 258 AIETFKANVVLVLGQEKLWKML 279



 Score =  224 bits (572), Expect(2) = e-162
 Identities = 105/167 (62%), Positives = 135/167 (80%)
 Frame = +3

Query: 1119 QEKLWSMLRDVLKSKANVDVVKLQKSGGVVSRNAKVRQKARGSRIREYFYGPANDLSPHS 1298
            QEKLW ML+D ++SK+N+DVVKL KS GVV RN+K RQ+ R  RI+EYFYG ANDL+PHS
Sbjct: 272  QEKLWKMLKDAVQSKSNIDVVKLHKSEGVVLRNSKYRQRTRSFRIKEYFYGIANDLAPHS 331

Query: 1299 NTANFSDLLIYRIGGGPQAPRSALPVGAEPVSDRLRVAPVSVNQDLHHLVLAVSFAKEPD 1478
            N  NFSD+ +Y+IGGG QAPRSALP+GAEPV+D  R+  V+++ D+ H VLA+S+AKEP+
Sbjct: 332  NIVNFSDVSVYKIGGGHQAPRSALPIGAEPVADPTRLVAVNISTDMIHTVLAISYAKEPE 391

Query: 1479 EIMSSNVAGFIWVTDINFESKKITYLAPSAGSLPGKYLIVGNLTWCE 1619
            EI+SSNVAGFI VTD++ + KK+TY+AP  G LP + LI  +LTW E
Sbjct: 392  EIISSNVAGFIHVTDVDIQRKKLTYIAPCPGDLPSRLLIASSLTWYE 438


>gb|ACG32121.1| pre-mRNA cleavage complex II protein Clp1 [Zea mays]
          Length = 439

 Score =  375 bits (963), Expect(2) = e-162
 Identities = 181/262 (69%), Positives = 221/262 (84%), Gaps = 3/262 (1%)
 Frame = +1

Query: 220 RQVKLDKECELRVEVGPNFPLRLRLLSGTAEIFGTEIPPEIRLTFPPGHKFAVFTWYGAM 399
           RQ KL  + ELRVEV P+ PLR+RL++GTAEIFGTE+PPE  +  PP  K A+FTW+GA 
Sbjct: 18  RQYKLAPQSELRVEVLPDAPLRVRLVTGTAEIFGTELPPEGWVPVPPRSKIAIFTWHGAT 77

Query: 400 IEIDGTTETDYTADETPMISYINVHAVLDARRNRAK---ASPGDSDDSQGPRVIVVGPTD 570
           +E+DG +E++YT+DETPM+ Y+N HA+LDARR RA+   A  GD + SQGPRVIVVGPTD
Sbjct: 78  VELDGVSESEYTSDETPMVIYVNTHAILDARRARARIAAAQGGDKEASQGPRVIVVGPTD 137

Query: 571 SGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVEGIPLDMPL 750
           SGKSTL +MLLSWAAK GWKPT+VDLDIGQGSITIPGCI+ATPIE PID ++GIPL+MPL
Sbjct: 138 SGKSTLCKMLLSWAAKLGWKPTYVDLDIGQGSITIPGCISATPIEKPIDLIDGIPLEMPL 197

Query: 751 VYFHGHVTPSANVELYKVLVKELAQVLDRQFAGNVESRAAGMVINTMGWIEGVGYELLLH 930
           VYF+GH  PS N ++YKVL+KELA+ L++QF+GN ESRAAGMVINTMGW+EG+GYELLL+
Sbjct: 198 VYFYGHPNPSINADVYKVLMKELAKTLEKQFSGNAESRAAGMVINTMGWVEGLGYELLLN 257

Query: 931 AIDTFNATVVLVLGQVSVYSGL 996
           AI+TF A VVLVLGQ  ++  L
Sbjct: 258 AIETFKANVVLVLGQEKLWKML 279



 Score =  224 bits (572), Expect(2) = e-162
 Identities = 105/167 (62%), Positives = 135/167 (80%)
 Frame = +3

Query: 1119 QEKLWSMLRDVLKSKANVDVVKLQKSGGVVSRNAKVRQKARGSRIREYFYGPANDLSPHS 1298
            QEKLW ML+D ++SK+N+DVVKL KS GVV RN+K RQ+ R  RI+EYFYG ANDL+PHS
Sbjct: 272  QEKLWKMLKDAVQSKSNIDVVKLHKSEGVVLRNSKYRQRTRSFRIKEYFYGIANDLAPHS 331

Query: 1299 NTANFSDLLIYRIGGGPQAPRSALPVGAEPVSDRLRVAPVSVNQDLHHLVLAVSFAKEPD 1478
            N  NFSD+ +Y+IGGG QAPRSALP+GAEPV+D  R+  V+++ D+ H VLA+S+AKEP+
Sbjct: 332  NIVNFSDVSVYKIGGGHQAPRSALPIGAEPVADPTRLVAVNISTDMIHTVLAISYAKEPE 391

Query: 1479 EIMSSNVAGFIWVTDINFESKKITYLAPSAGSLPGKYLIVGNLTWCE 1619
            EI+SSNVAGFI VTD++ + KK+TY+AP  G LP + LI  +LTW E
Sbjct: 392  EIISSNVAGFIHVTDVDIQRKKLTYIAPCPGDLPSRLLIASSLTWYE 438


>ref|XP_002451771.1| hypothetical protein SORBIDRAFT_04g007560 [Sorghum bicolor]
           gi|241931602|gb|EES04747.1| hypothetical protein
           SORBIDRAFT_04g007560 [Sorghum bicolor]
          Length = 439

 Score =  375 bits (962), Expect(2) = e-162
 Identities = 181/262 (69%), Positives = 223/262 (85%), Gaps = 3/262 (1%)
 Frame = +1

Query: 220 RQVKLDKECELRVEVGPNFPLRLRLLSGTAEIFGTEIPPEIRLTFPPGHKFAVFTWYGAM 399
           RQ KL  + ELRVEV P+ PLR+RL++GTAEIFGTE+PPE  +  PP  K A+FTW+GA 
Sbjct: 18  RQYKLAPQSELRVEVLPDAPLRVRLVTGTAEIFGTELPPEGWVPVPPRSKIAIFTWHGAT 77

Query: 400 IEIDGTTETDYTADETPMISYINVHAVLDARRNRAKASP---GDSDDSQGPRVIVVGPTD 570
           +E+DG +E++Y++DETPM+ Y+N HA+LDARR RA+A+    GD + SQGPRVIVVGPTD
Sbjct: 78  VELDGVSESEYSSDETPMVIYVNTHAILDARRARARAAAAQGGDMEASQGPRVIVVGPTD 137

Query: 571 SGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVEGIPLDMPL 750
           SGKSTL +MLLSWAAK GWKPT+VDLDIGQGSITIPGCI+ATPIE PID V+GIPL+MPL
Sbjct: 138 SGKSTLCKMLLSWAAKLGWKPTYVDLDIGQGSITIPGCISATPIEKPIDIVDGIPLEMPL 197

Query: 751 VYFHGHVTPSANVELYKVLVKELAQVLDRQFAGNVESRAAGMVINTMGWIEGVGYELLLH 930
           VYF+GH +PS N ++YKVL+KELA+ L++QF+GN ESRAAGMVINTMGW+EG+GYELLL+
Sbjct: 198 VYFYGHSSPSINADVYKVLMKELAKTLEKQFSGNAESRAAGMVINTMGWVEGLGYELLLN 257

Query: 931 AIDTFNATVVLVLGQVSVYSGL 996
           AI+TF A VVLVLGQ  ++  L
Sbjct: 258 AIETFKANVVLVLGQEKLWKML 279



 Score =  225 bits (573), Expect(2) = e-162
 Identities = 106/167 (63%), Positives = 133/167 (79%)
 Frame = +3

Query: 1119 QEKLWSMLRDVLKSKANVDVVKLQKSGGVVSRNAKVRQKARGSRIREYFYGPANDLSPHS 1298
            QEKLW ML+D ++SK+N+DVVKL KS GVV RN K RQK R  RIREYFYG ANDL+PHS
Sbjct: 272  QEKLWKMLKDAVQSKSNIDVVKLHKSEGVVLRNTKYRQKTRSFRIREYFYGIANDLAPHS 331

Query: 1299 NTANFSDLLIYRIGGGPQAPRSALPVGAEPVSDRLRVAPVSVNQDLHHLVLAVSFAKEPD 1478
            N  NFS + +Y+IGGG QAPRSALP+GAEPV+D  R+  V+++ D+ H VLA+S+AKEPD
Sbjct: 332  NIVNFSHVSVYKIGGGHQAPRSALPIGAEPVADPTRLVAVNISTDMIHTVLAISYAKEPD 391

Query: 1479 EIMSSNVAGFIWVTDINFESKKITYLAPSAGSLPGKYLIVGNLTWCE 1619
            EI+SSN+AGFI VTD++ + KK+TY+AP  G LP + LI  +LTW E
Sbjct: 392  EIISSNIAGFIHVTDVDIQRKKLTYIAPCPGDLPSRLLIASSLTWYE 438


>ref|NP_001151165.1| pre-mRNA cleavage complex II protein Clp1 [Zea mays]
           gi|195644730|gb|ACG41833.1| pre-mRNA cleavage complex II
           protein Clp1 [Zea mays]
          Length = 439

 Score =  373 bits (957), Expect(2) = e-161
 Identities = 180/262 (68%), Positives = 220/262 (83%), Gaps = 3/262 (1%)
 Frame = +1

Query: 220 RQVKLDKECELRVEVGPNFPLRLRLLSGTAEIFGTEIPPEIRLTFPPGHKFAVFTWYGAM 399
           RQ KL  + ELRVEV P+ PLR+RL++GTAEIFGTE+PPE  +  PP  K A+FTW+GA 
Sbjct: 18  RQYKLAPQSELRVEVLPDAPLRVRLVTGTAEIFGTELPPEGWVPVPPRSKIAIFTWHGAT 77

Query: 400 IEIDGTTETDYTADETPMISYINVHAVLDARRNRAK---ASPGDSDDSQGPRVIVVGPTD 570
           +E+DG +E++YT+DETPM+ Y+N HA+LDARR RA+   A  GD + SQGPRVIVVGPTD
Sbjct: 78  VELDGVSESEYTSDETPMVIYVNTHAILDARRARARTAAAQGGDKEASQGPRVIVVGPTD 137

Query: 571 SGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVEGIPLDMPL 750
           SGKSTL +MLL WAAK GWKPT+VDLDIGQGSITIPGCI+ATPIE PID ++GIPL+MPL
Sbjct: 138 SGKSTLCKMLLIWAAKLGWKPTYVDLDIGQGSITIPGCISATPIEKPIDIIDGIPLEMPL 197

Query: 751 VYFHGHVTPSANVELYKVLVKELAQVLDRQFAGNVESRAAGMVINTMGWIEGVGYELLLH 930
           VYF+GH  PS N ++YKVL+KELA+ L++QF+GN ESRAAGMVINTMGW+EG+GYELLL+
Sbjct: 198 VYFYGHPNPSINADVYKVLMKELAKTLEKQFSGNAESRAAGMVINTMGWVEGLGYELLLN 257

Query: 931 AIDTFNATVVLVLGQVSVYSGL 996
           AI+TF A VVLVLGQ  ++  L
Sbjct: 258 AIETFKANVVLVLGQEKLWKML 279



 Score =  224 bits (572), Expect(2) = e-161
 Identities = 105/167 (62%), Positives = 135/167 (80%)
 Frame = +3

Query: 1119 QEKLWSMLRDVLKSKANVDVVKLQKSGGVVSRNAKVRQKARGSRIREYFYGPANDLSPHS 1298
            QEKLW ML+D ++SK+N+DVVKL KS GVV RN+K RQ+ R  RI+EYFYG ANDL+PHS
Sbjct: 272  QEKLWKMLKDAVQSKSNIDVVKLHKSEGVVLRNSKYRQRTRSFRIKEYFYGIANDLAPHS 331

Query: 1299 NTANFSDLLIYRIGGGPQAPRSALPVGAEPVSDRLRVAPVSVNQDLHHLVLAVSFAKEPD 1478
            N  NFSD+ +Y+IGGG QAPRSALP+GAEPV+D  R+  V+++ D+ H VLA+S+AKEP+
Sbjct: 332  NIVNFSDVSVYKIGGGHQAPRSALPIGAEPVADPTRLVAVNISTDMIHTVLAISYAKEPE 391

Query: 1479 EIMSSNVAGFIWVTDINFESKKITYLAPSAGSLPGKYLIVGNLTWCE 1619
            EI+SSNVAGFI VTD++ + KK+TY+AP  G LP + LI  +LTW E
Sbjct: 392  EIISSNVAGFIHVTDVDIQXKKLTYIAPCPGDLPSRLLIASSLTWYE 438