BLASTX nr result

ID: Salvia21_contig00021552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00021552
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_002512958.1| RNA-binding protein, putative [Ricinus commu...    80   2e-13
ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glyc...    76   3e-12
ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glyc...    74   2e-11
emb|CBI38027.3| unnamed protein product [Vitis vinifera]               74   2e-11

>ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|222850181|gb|EEE87728.1|
            predicted protein [Populus trichocarpa]
          Length = 974

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
 Frame = +1

Query: 1    AKSRVSPVVMKKPNLQVSDQRKGRGAGGQNLIPSNTVSK--KEGRDAGMPRKMIDQSERS 174
            AK +      K    Q   + +GR + G N + S  + K  KE       RK  +Q+E +
Sbjct: 853  AKDKRESREQKAKGSQHKQKDEGRKSDGGNSVNSEKIVKPFKEADLWLTKRKRPNQTEEN 912

Query: 175  TEGDGGECNRKRRRRSDPVGRDVMDKLDMLIEQYRSKFTGSSATQSDGKKQGSKSLKRWF 354
              G   E  ++ ++  DPVG+DV DKLDMLIEQY+SKF+  +A + +G+KQ +K LKRWF
Sbjct: 913  KGGKSSEKRKRPKKNKDPVGQDVADKLDMLIEQYKSKFSKQTADKPEGEKQANKQLKRWF 972

Query: 355  QS 360
            QS
Sbjct: 973  QS 974


>ref|XP_002512958.1| RNA-binding protein, putative [Ricinus communis]
            gi|223547969|gb|EEF49461.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 916

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 54/127 (42%), Positives = 73/127 (57%), Gaps = 7/127 (5%)
 Frame = +1

Query: 1    AKSRVSPVVMKKPNLQVSDQRKGRGAGGQNLIPSNTVSKKEGRDAGM---PRKMIDQSER 171
            AK +V   V K+ + QV     G    G+ L+   T   +   +AG+    RK + Q ++
Sbjct: 795  AKQKVKDSVDKQNHHQVRKPDVGDSVKGE-LMGKITRKSQPLEEAGLRLQKRKPLSQGKQ 853

Query: 172  STEGDGGECNRKRRRR----SDPVGRDVMDKLDMLIEQYRSKFTGSSATQSDGKKQGSKS 339
                  GE N KRR+R     DPVGRDV+DKLDMLIEQYRSKF+  ++ + D +KQ +K 
Sbjct: 854  QE----GEENSKRRKRLKKNKDPVGRDVVDKLDMLIEQYRSKFSKRTSEKPDDEKQANKP 909

Query: 340  LKRWFQS 360
             KRWFQS
Sbjct: 910  RKRWFQS 916


>ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 956

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 43/114 (37%), Positives = 69/114 (60%), Gaps = 7/114 (6%)
 Frame = +1

Query: 40   NLQVSDQRKGRGAGGQNLIPSNTVS----KKEGR--DAGMPRKMIDQSERSTEGDGGECN 201
            +++  +   G+  GG +L   NT +    +K G   D G  ++ I   E+     G + +
Sbjct: 846  SMKPKNNENGQSNGGASLEGQNTATYSNRRKSGNREDWGFRKRKIQNQEQEA---GQKVS 902

Query: 202  RKR-RRRSDPVGRDVMDKLDMLIEQYRSKFTGSSATQSDGKKQGSKSLKRWFQS 360
            +KR ++  D VG+DV DKLDMLIEQYRSKF+   + ++DG+++ SK L++WFQS
Sbjct: 903  KKRPKKNKDSVGKDVGDKLDMLIEQYRSKFSHKGSQENDGERKPSKQLRKWFQS 956


>ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 958

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
 Frame = +1

Query: 40   NLQVSDQRKGRGAGGQNLIPSNTVSKKEGRDAG-------MPRKMIDQSERSTEGDGGEC 198
            +++  +   G   GG +L   NT +    R +G         RKM +Q + +    G + 
Sbjct: 848  SMKPKNNENGHNNGGASLEGQNTATDSNRRKSGNKDDVGFRKRKMQNQEQEA----GQKV 903

Query: 199  NRKR-RRRSDPVGRDVMDKLDMLIEQYRSKFTGSSATQSDGKKQGSKSLKRWFQS 360
             +KR ++    VG+DV+DKLDML+EQY+SKF+   + ++DG+K+ SK L++WFQS
Sbjct: 904  LKKRLKKNKGSVGKDVVDKLDMLVEQYKSKFSHKGSLENDGEKRHSKQLRKWFQS 958


>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
 Frame = +1

Query: 64   KGRGAGGQNLIPSNTVSKKEGRDAGMPRKMIDQSERSTE------GDGGECNRKRRRRSD 225
            KG     + L   +T+SK     +     M+ +  +  E      G   +   + RR  D
Sbjct: 814  KGAPDDEKPLKAESTISKARNSKSSEESNMLPKKRKLQEHIAVQEGKSPKQKTRTRRSKD 873

Query: 226  PVGRDVMDKLDMLIEQYRSKFTGSSATQSDGKKQGSKSLKRWFQS 360
            P G+ ++DKLDML+EQYR+KF+  +  ++DG+KQGS+ LKRWFQS
Sbjct: 874  PSGQVILDKLDMLVEQYRAKFSQQTDDKTDGQKQGSRQLKRWFQS 918


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