BLASTX nr result
ID: Salvia21_contig00021374
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Salvia21_contig00021374
(516 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi... 184 6e-45
ref|XP_002521663.1| pentatricopeptide repeat-containing protein,... 177 6e-43
ref|XP_003593286.1| Pentatricopeptide repeat-containing protein ... 169 3e-40
gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula] 169 3e-40
ref|XP_002867315.1| pentatricopeptide repeat-containing protein ... 164 9e-39
>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 184 bits (467), Expect = 6e-45
Identities = 93/171 (54%), Positives = 121/171 (70%)
Frame = -3
Query: 514 TALVDFYWRFGDPEMAFRVFDGIVEKNEVSWTAMICGCIEFQDHVRAFACLRAMQFGDVK 335
TALVDFY+R GD MA RVFDG+ KN VSWT MI GCI QD+ AFAC RAMQ V
Sbjct: 192 TALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVC 251
Query: 334 PNRVTLVSVLPACAALHSLPHGKEIHGYAVRHGYDSDAQLSAALLHVYCECRGAVRIARL 155
PNRVT +++L ACA + HGKEIHGYA RHG++S S+AL+++YC+C + +A L
Sbjct: 252 PNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAEL 311
Query: 154 IFERSVSKEVVMWSSMIAGYSRSKATAREGIKLFNRMQVEGIVPNSATILA 2
IFE S ++VV+WSS+I +SR + + + +KLFN+M+ E I PN T+LA
Sbjct: 312 IFEGSSFRDVVLWSSIIGSFSR-RGDSFKALKLFNKMRTEEIEPNYVTLLA 361
Score = 93.2 bits (230), Expect = 2e-17
Identities = 52/172 (30%), Positives = 95/172 (55%), Gaps = 1/172 (0%)
Frame = -3
Query: 514 TALVDFYWRFGDP-EMAFRVFDGIVEKNEVSWTAMICGCIEFQDHVRAFACLRAMQFGDV 338
+ALV+ Y + G+P +A +F+G ++ V W+++I D +A M+ ++
Sbjct: 293 SALVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEI 352
Query: 337 KPNRVTLVSVLPACAALHSLPHGKEIHGYAVRHGYDSDAQLSAALLHVYCECRGAVRIAR 158
+PN VTL++V+ AC L SL HG +HGY + G+ + AL+++Y +C G + +R
Sbjct: 353 EPNYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKC-GCLNGSR 411
Query: 157 LIFERSVSKEVVMWSSMIAGYSRSKATAREGIKLFNRMQVEGIVPNSATILA 2
+F +++ V WSS+I+ Y + +++F M G+ P++ T LA
Sbjct: 412 KMFLEMPNRDNVTWSSLISAYG-LHGCGEQALQIFYEMNERGVKPDAITFLA 462
Score = 65.9 bits (159), Expect = 3e-09
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Frame = -3
Query: 511 ALVDFYWRFGDPEMAFRVFDGIVEKNEVSWTAMICGCIEFQDHVRAFACLRAMQFGDVKP 332
+++ Y++F D A +VFD + ++ ++W ++I G + A L + + P
Sbjct: 91 SIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALEALNDVYLLGLVP 150
Query: 331 NRVTLVSVLPACAALHSLPHGKEIHG-YAVRHGYDSDAQLSAALLHVYCECRGAVRIARL 155
L SV+ C G++IH V LS AL+ Y C G +A
Sbjct: 151 KPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYFRC-GDSLMALR 209
Query: 154 IFERSVSKEVVMWSSMIAGYSRSKATAREGIKLFNRMQVEGIVPNSATILA 2
+F+ K VV W++MI+G + E F MQ EG+ PN T +A
Sbjct: 210 VFDGMEVKNVVSWTTMISG-CIAHQDYDEAFACFRAMQAEGVCPNRVTSIA 259
>ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539054|gb|EEF40650.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 578
Score = 177 bits (450), Expect = 6e-43
Identities = 90/171 (52%), Positives = 117/171 (68%)
Frame = -3
Query: 514 TALVDFYWRFGDPEMAFRVFDGIVEKNEVSWTAMICGCIEFQDHVRAFACLRAMQFGDVK 335
T+LVD+Y++ GD MA RVFD I KN VSWTA++ GC D+ A C RAMQ V+
Sbjct: 167 TSLVDWYFKSGDSLMALRVFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVR 226
Query: 334 PNRVTLVSVLPACAALHSLPHGKEIHGYAVRHGYDSDAQLSAALLHVYCECRGAVRIARL 155
PNRVTL+++LPA A L GKEIHGYA RHG+D D ++L+H+YC R +++A+L
Sbjct: 227 PNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKL 286
Query: 154 IFERSVSKEVVMWSSMIAGYSRSKATAREGIKLFNRMQVEGIVPNSATILA 2
FERS K+VVMWSS+I Y RS A + E +KLF M+ +G PNS T+LA
Sbjct: 287 TFERSNVKDVVMWSSIIGSYCRS-ADSIEALKLFRWMRADGTEPNSVTLLA 336
Score = 92.0 bits (227), Expect = 4e-17
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Frame = -3
Query: 514 TALVDFYWRFGDP-EMAFRVFDGIVEKNEVSWTAMICGCIEFQDHVRAFACLRAMQFGDV 338
++L+ Y R + ++A F+ K+ V W+++I D + A R M+
Sbjct: 268 SSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSIIGSYCRSADSIEALKLFRWMRADGT 327
Query: 337 KPNRVTLVSVLPACAALHSLPHGKEIHGYAVRHGYDSDAQLSAALLHVYCECRGAVRIAR 158
+PN VTL++V+ AC L SL +G HGY V+ G + D + AL+++Y +C G V +
Sbjct: 328 EPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKC-GCVVASH 386
Query: 157 LIFERSVSKEVVMWSSMIAGYSRSKATAREGIKLFNRMQVEGIVPNSATILA 2
IF+ K+ V WS++I Y +E + LF+ MQ++G+ P++ T LA
Sbjct: 387 QIFKEMHIKDSVSWSTLITAYG-LHGHGKEALCLFHEMQLQGVEPDAMTFLA 437
Score = 62.8 bits (151), Expect = 3e-08
Identities = 41/170 (24%), Positives = 75/170 (44%)
Frame = -3
Query: 511 ALVDFYWRFGDPEMAFRVFDGIVEKNEVSWTAMICGCIEFQDHVRAFACLRAMQFGDVKP 332
+ + FY + E A +VFD + K+ +SW +I G + + F + M + P
Sbjct: 66 SFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVP 125
Query: 331 NRVTLVSVLPACAALHSLPHGKEIHGYAVRHGYDSDAQLSAALLHVYCECRGAVRIARLI 152
+ SV+ C L + G+ IH + G + L + G +A +
Sbjct: 126 KPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRV 185
Query: 151 FERSVSKEVVMWSSMIAGYSRSKATAREGIKLFNRMQVEGIVPNSATILA 2
F++ K VV W+++++G S + + F MQ+ G+ PN T++A
Sbjct: 186 FDQIEVKNVVSWTALVSGCS-ANLDYNMALDCFRAMQINGVRPNRVTLIA 234
>ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 622
Score = 169 bits (427), Expect = 3e-40
Identities = 87/171 (50%), Positives = 115/171 (67%)
Frame = -3
Query: 514 TALVDFYWRFGDPEMAFRVFDGIVEKNEVSWTAMICGCIEFQDHVRAFACLRAMQFGDVK 335
TA VDFY+R GD MA VFD + KNEVSWTA+I GC QD+ A AC R MQ V
Sbjct: 211 TAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVS 270
Query: 334 PNRVTLVSVLPACAALHSLPHGKEIHGYAVRHGYDSDAQLSAALLHVYCECRGAVRIARL 155
PNRVTL+++L ACA + +GKEIHGYA R G+DS S AL+++YCEC ++ +A
Sbjct: 271 PNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAER 330
Query: 154 IFERSVSKEVVMWSSMIAGYSRSKATAREGIKLFNRMQVEGIVPNSATILA 2
IFE S ++VV+WSS+I Y+R + + + +KLFN+M+ E PN T+LA
Sbjct: 331 IFEGSSLRDVVLWSSIIGSYAR-RGESDKALKLFNKMRTEETEPNYVTLLA 380
Score = 81.6 bits (200), Expect = 6e-14
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
Frame = -3
Query: 511 ALVDFYWRFGDP-EMAFRVFDGIVEKNEVSWTAMICGCIEFQDHVRAFACLRAMQFGDVK 335
AL+ Y G +A R+F+G ++ V W+++I + +A M+ + +
Sbjct: 313 ALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETE 372
Query: 334 PNRVTLVSVLPACAALHSLPHGKEIHGYAVRHGYDSDAQLSAALLHVYCECRGAVRIARL 155
PN VTL++V+ AC L S HG IHGY ++ G + AL+++Y +C G++ +R
Sbjct: 373 PNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKC-GSLDDSRK 431
Query: 154 IFERSVSKEVVMWSSMIAGYSRSKATAREGIKLFNRMQVEGIVPNSATILA 2
IF S++ V W+SMI+ Y + ++ F M+ G+ ++ T LA
Sbjct: 432 IFLEMPSRDSVTWNSMISAYG-LHGYGEQALQHFYEMKERGVKLDAVTFLA 481
Score = 68.6 bits (166), Expect = 5e-10
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 5/175 (2%)
Frame = -3
Query: 511 ALVDFYWRFGDPEMAFRVFDGIVEKNEVSWTAMICGCIEFQDHVRAFACLRAMQFGDVKP 332
+++ Y +F D E A +VFD + ++ ++W +MI ++ V A L+ F P
Sbjct: 106 SIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLP 165
Query: 331 NRVTLVSVLPACAALHSLPH--GKEIHGYAVRHG---YDSDAQLSAALLHVYCECRGAVR 167
L S++ C L G++IHG V G LS A + Y C G
Sbjct: 166 KPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRC-GDSL 224
Query: 166 IARLIFERSVSKEVVMWSSMIAGYSRSKATAREGIKLFNRMQVEGIVPNSATILA 2
+AR +F+ K V W+++I+G + ++ + + MQVEG+ PN T++A
Sbjct: 225 MARSVFDEMEVKNEVSWTAVISGCANNQ-DYDVALACYREMQVEGVSPNRVTLIA 278
>gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 460
Score = 169 bits (427), Expect = 3e-40
Identities = 87/171 (50%), Positives = 115/171 (67%)
Frame = -3
Query: 514 TALVDFYWRFGDPEMAFRVFDGIVEKNEVSWTAMICGCIEFQDHVRAFACLRAMQFGDVK 335
TA VDFY+R GD MA VFD + KNEVSWTA+I GC QD+ A AC R MQ V
Sbjct: 211 TAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVS 270
Query: 334 PNRVTLVSVLPACAALHSLPHGKEIHGYAVRHGYDSDAQLSAALLHVYCECRGAVRIARL 155
PNRVTL+++L ACA + +GKEIHGYA R G+DS S AL+++YCEC ++ +A
Sbjct: 271 PNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAER 330
Query: 154 IFERSVSKEVVMWSSMIAGYSRSKATAREGIKLFNRMQVEGIVPNSATILA 2
IFE S ++VV+WSS+I Y+R + + + +KLFN+M+ E PN T+LA
Sbjct: 331 IFEGSSLRDVVLWSSIIGSYAR-RGESDKALKLFNKMRTEETEPNYVTLLA 380
Score = 77.0 bits (188), Expect = 1e-12
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 1/140 (0%)
Frame = -3
Query: 511 ALVDFYWRFGDP-EMAFRVFDGIVEKNEVSWTAMICGCIEFQDHVRAFACLRAMQFGDVK 335
AL+ Y G +A R+F+G ++ V W+++I + +A M+ + +
Sbjct: 313 ALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETE 372
Query: 334 PNRVTLVSVLPACAALHSLPHGKEIHGYAVRHGYDSDAQLSAALLHVYCECRGAVRIARL 155
PN VTL++V+ AC L S HG IHGY ++ G + AL+++Y +C G++ +R
Sbjct: 373 PNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKC-GSLDDSRK 431
Query: 154 IFERSVSKEVVMWSSMIAGY 95
IF S++ V W+SMI+ Y
Sbjct: 432 IFLEMPSRDSVTWNSMISAY 451
Score = 68.6 bits (166), Expect = 5e-10
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 5/175 (2%)
Frame = -3
Query: 511 ALVDFYWRFGDPEMAFRVFDGIVEKNEVSWTAMICGCIEFQDHVRAFACLRAMQFGDVKP 332
+++ Y +F D E A +VFD + ++ ++W +MI ++ V A L+ F P
Sbjct: 106 SIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLP 165
Query: 331 NRVTLVSVLPACAALHSLPH--GKEIHGYAVRHG---YDSDAQLSAALLHVYCECRGAVR 167
L S++ C L G++IHG V G LS A + Y C G
Sbjct: 166 KPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRC-GDSL 224
Query: 166 IARLIFERSVSKEVVMWSSMIAGYSRSKATAREGIKLFNRMQVEGIVPNSATILA 2
+AR +F+ K V W+++I+G + ++ + + MQVEG+ PN T++A
Sbjct: 225 MARSVFDEMEVKNEVSWTAVISGCANNQ-DYDVALACYREMQVEGVSPNRVTLIA 278
>ref|XP_002867315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297313151|gb|EFH43574.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 598
Score = 164 bits (414), Expect = 9e-39
Identities = 87/172 (50%), Positives = 118/172 (68%), Gaps = 1/172 (0%)
Frame = -3
Query: 514 TALVDFYWRFGDPEMAFRVFDGIVEKNEVSWTAMICGCIEFQDHVRAFACLRAMQFGDVK 335
TAL+D Y +F DP AF VFD + KNEVSWTAMI GC+ ++ RAMQ +++
Sbjct: 189 TALLDMYLKFDDPAAAFHVFDQMELKNEVSWTAMISGCVANYNYEVGIDFFRAMQRENLR 248
Query: 334 PNRVTLVSVLPACAAL-HSLPHGKEIHGYAVRHGYDSDAQLSAALLHVYCECRGAVRIAR 158
PNRVTL+SVLPAC L + L KEIHG++ RHG+ SD +L AA + +YC C G+V ++R
Sbjct: 249 PNRVTLLSVLPACVELGYGLRLVKEIHGFSFRHGFHSDDRLIAAFMTMYCRC-GSVSLSR 307
Query: 157 LIFERSVSKEVVMWSSMIAGYSRSKATAREGIKLFNRMQVEGIVPNSATILA 2
L+FE S ++VVMWSSMI+GY+ + E + L ++M+ EG PNS T+LA
Sbjct: 308 LLFETSKVRDVVMWSSMISGYAEN-GDCSEAMNLLSQMRKEGSEPNSVTLLA 358
Score = 74.7 bits (182), Expect = 7e-12
Identities = 52/170 (30%), Positives = 82/170 (48%)
Frame = -3
Query: 511 ALVDFYWRFGDPEMAFRVFDGIVEKNEVSWTAMICGCIEFQDHVRAFACLRAMQFGDVKP 332
A + Y R G ++ +F+ ++ V W++MI G E D A L M+ +P
Sbjct: 292 AFMTMYCRCGSVSLSRLLFETSKVRDVVMWSSMISGYAENGDCSEAMNLLSQMRKEGSEP 351
Query: 331 NRVTLVSVLPACAALHSLPHGKEIHGYAVRHGYDSDAQLSAALLHVYCECRGAVRIARLI 152
N VTL++V+ AC SL +H ++ G+ S LS AL+ +Y +C G++ AR +
Sbjct: 352 NSVTLLAVVSACTHSASLKIASTVHSQILKCGFMSHILLSNALIDMYAKC-GSLPAAREV 410
Query: 151 FERSVSKEVVMWSSMIAGYSRSKATAREGIKLFNRMQVEGIVPNSATILA 2
F K++V WSSMI Y E +++F M G + LA
Sbjct: 411 FYELNEKDLVSWSSMINAYG-LHGHGSEALEIFKGMIKAGHEVDGMAFLA 459