BLASTX nr result

ID: Salvia21_contig00021369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00021369
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ13715.1| putative replication factor A [Capsicum chinense]     105   4e-21
ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subu...    93   2e-17
emb|CBI17841.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [V...    88   9e-16
ref|XP_004146319.1| PREDICTED: replication protein A 32 kDa subu...    86   3e-15

>emb|CAJ13715.1| putative replication factor A [Capsicum chinense]
          Length = 299

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/98 (55%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
 Frame = +3

Query: 6   QMPKPAANTTPSKGYQPTSSNHFSVQYNMDGIKGIDELVLNFMQQPSCLG-EKGVHLADI 182
           Q+P  + NT P KGYQ ++SN F   +NMDGI G+ ++VL+++QQPSCL  EKGVH  ++
Sbjct: 203 QVPSSSFNT-PLKGYQASASNQFP-GFNMDGIGGVHKMVLDYLQQPSCLALEKGVHRNEL 260

Query: 183 AKHLTVPEHKISEAIASLESNGLIYHTIDDFHYKSAAN 296
           A+ L VP  KI  A+ +LES GL+Y TIDDFHYKS  N
Sbjct: 261 AQQLRVPSEKIMGAMEALESEGLVYSTIDDFHYKSTGN 298


>ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
          Length = 275

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = +3

Query: 33  TPSKGYQPTSSNHFSVQYNMDGIKGIDELVLNFMQQPSCLG-EKGVHLADIAKHLTVPEH 209
           TP KGYQ +  N FS QY   G+KG+D+LV++++QQP  L  ++GV   ++A+ L VP  
Sbjct: 187 TPLKGYQASQPNQFSGQYGA-GLKGVDQLVIDYLQQPQSLARDQGVGRDELAQQLNVPVD 245

Query: 210 KISEAIASLESNGLIYHTIDDFHYKSAANG 299
           KI E+I SLE  GLIY TID++HYKS  NG
Sbjct: 246 KIMESIRSLEEEGLIYSTIDEWHYKSTGNG 275


>emb|CBI17841.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = +3

Query: 33  TPSKGYQPTSSNHFSVQYNMDGIKGIDELVLNFMQQPSCLG-EKGVHLADIAKHLTVPEH 209
           TP KGYQ +  N FS QY   G+KG+D+LV++++QQP  L  ++GV   ++A+ L VP  
Sbjct: 189 TPLKGYQASQPNQFSGQYGA-GLKGVDQLVIDYLQQPQSLARDQGVGRDELAQQLNVPVD 247

Query: 210 KISEAIASLESNGLIYHTIDDFHYKSAANG 299
           KI E+I SLE  GLIY TID++HYKS  NG
Sbjct: 248 KIMESIRSLEEEGLIYSTIDEWHYKSTGNG 277


>ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [Vitis vinifera]
           gi|296081770|emb|CBI20775.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score = 87.8 bits (216), Expect = 9e-16
 Identities = 46/97 (47%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
 Frame = +3

Query: 12  PKPAANTTPSKGYQPTSSNHFSVQYNMDGIKGIDELVLNFMQQPSCLG-EKGVHLADIAK 188
           P  A+  T S GYQ T S+  S Q ++DG+KG+D++VL+++QQPS    EKG+H  ++++
Sbjct: 174 PLSASVKTESTGYQ-TPSSQLSAQ-SVDGVKGLDQMVLDYLQQPSNYDREKGIHRDELSQ 231

Query: 189 HLTVPEHKISEAIASLESNGLIYHTIDDFHYKSAANG 299
            L +   KI E+I +LE  GLIY TID+FHYKS  +G
Sbjct: 232 QLKISTEKIMESIRTLEEEGLIYSTIDEFHYKSTTSG 268


>ref|XP_004146319.1| PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis
           sativus] gi|449500253|ref|XP_004161048.1| PREDICTED:
           replication protein A 32 kDa subunit B-like [Cucumis
           sativus]
          Length = 277

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 42/91 (46%), Positives = 58/91 (63%)
 Frame = +3

Query: 27  NTTPSKGYQPTSSNHFSVQYNMDGIKGIDELVLNFMQQPSCLGEKGVHLADIAKHLTVPE 206
           + TP K YQ   +N ++ Q   D  K ++++VL+F+Q PSC  E+G H   IA+ L VP 
Sbjct: 187 SNTPMKVYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPL 246

Query: 207 HKISEAIASLESNGLIYHTIDDFHYKSAANG 299
            K+  A+ +LE  GLIY T DDFH+KS ANG
Sbjct: 247 EKLIPAMKNLEEEGLIYSTTDDFHFKSTANG 277


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