BLASTX nr result

ID: Salvia21_contig00021360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00021360
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi...   209   5e-52
ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi...   197   2e-48
gb|AFK33630.1| unknown [Lotus japonicus]                              196   3e-48
ref|XP_003612457.1| Pentatricopeptide repeat-containing protein ...   187   2e-45
ref|XP_002519945.1| pentatricopeptide repeat-containing protein,...   167   2e-39

>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Glycine max]
          Length = 423

 Score =  209 bits (531), Expect = 5e-52
 Identities = 111/221 (50%), Positives = 142/221 (64%), Gaps = 2/221 (0%)
 Frame = -1

Query: 663 KPNRKPGATTSDILRLMDGLKLPIPIDIYTSLIKECTESGDPFKAIELHEHIRRSGIRPS 484
           K  ++ GATTSDIL LM+ L  P+PIDIYTSLIKECT SGDP  AIEL  HI +SGI+P 
Sbjct: 72  KKKKRKGATTSDILHLMEALPFPVPIDIYTSLIKECTVSGDPETAIELATHISKSGIKPP 131

Query: 483 LSVANRILLMYVSSGCFEHARHLFDEMSVRDFNSWAILIAGCVENGEHGEATKLFVKMLR 304
           L   NRIL+M+VS G  E+ARH+FD+M VRDFN+WA L     +N ++ EAT +FV ML 
Sbjct: 132 LPFLNRILVMFVSCGLLENARHMFDKMRVRDFNTWATLFVAYYDNTDYEEATNVFVNMLT 191

Query: 303 DKELDTAGAHQLGFS--VPGILVCVLRACVFTMDFELGRQVHGWLWKVGFSRNAALSSFL 130
                     QLG     P I  C+LRAC  T++  LG QVHGWL K+G   +  LSS L
Sbjct: 192 ----------QLGMMEFPPWIWACLLRACACTVNVPLGMQVHGWLLKLGTCDHVLLSSSL 241

Query: 129 ISFYGKLRHHEGGERVFEQVDCRDTAVWTSRMVNCCNDDNF 7
           I+FYG+    E    VF+ V   +T  WT+++V+ C + +F
Sbjct: 242 INFYGRFTCLEDASVVFDGVSRHNTLTWTAKIVSGCRERHF 282


>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Vitis vinifera]
          Length = 414

 Score =  197 bits (501), Expect = 2e-48
 Identities = 108/213 (50%), Positives = 146/213 (68%), Gaps = 3/213 (1%)
 Frame = -1

Query: 642 ATTSDILRLMDGLKLPIPIDIYTSLIKECTESGDPFKAIELHEHIRRSGIRPSLSVANRI 463
           +T +DILRLMDGL LPIP DIY SLIKE + +GD  +A +L  HI RSG+  S ++ NRI
Sbjct: 59  STPTDILRLMDGLGLPIPPDIYASLIKESSTTGDATQATQLLAHINRSGLPLSSALLNRI 118

Query: 462 LLMYVSSGCFEHARHLFDEMSVRDFN--SWAILIAGCVENGEHGEATKLFVKMLRDKELD 289
           LLMYVS G    ARH+FD+M+V + N  SWAI++A  ++NG + EA  LFV+M+   EL 
Sbjct: 119 LLMYVSCGLIHTARHMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAIFLFVQMM---ELH 175

Query: 288 TAGAHQLGFSVPG-ILVCVLRACVFTMDFELGRQVHGWLWKVGFSRNAALSSFLISFYGK 112
           +     +   +P  I +CVL+ACV TM+  LG+QVHGWL KVG++ N  LS +LISFYGK
Sbjct: 176 ST----IMLELPAWIFICVLKACVHTMNLTLGKQVHGWLLKVGYATNLFLSCYLISFYGK 231

Query: 111 LRHHEGGERVFEQVDCRDTAVWTSRMVNCCNDD 13
            R  +  + VF+Q   R+T +WT++MVN C  +
Sbjct: 232 FRCLDDADFVFDQTSERNTVIWTAKMVNKCQGE 264


>gb|AFK33630.1| unknown [Lotus japonicus]
          Length = 356

 Score =  196 bits (499), Expect = 3e-48
 Identities = 107/221 (48%), Positives = 136/221 (61%), Gaps = 2/221 (0%)
 Frame = -1

Query: 663 KPNRKPGATTSDILRLMDGLKLPIPIDIYTSLIKECTESGDPFKAIELHEHIRRSGIRPS 484
           K  ++ GATTS IL LMD L  PIPIDIYTSLIKECT S DP  AIELH HI  SGI+P 
Sbjct: 5   KKRKRKGATTSHILHLMDVLPFPIPIDIYTSLIKECTLSPDPQTAIELHTHIAHSGIKPP 64

Query: 483 LSVANRILLMYVSSGCFEHARHLFDEMSVRDFNSWAILIAGCVENGEHGEATKLFVKMLR 304
           LS  NRIL+M+VS G  ++A  LFD M V+DFNSWA L     +N ++ EA  +F+ ML 
Sbjct: 65  LSFINRILVMFVSCGLLDYACQLFDAMPVKDFNSWATLFIAYYDNADYEEAIDVFLAML- 123

Query: 303 DKELDTAGAHQLGFS--VPGILVCVLRACVFTMDFELGRQVHGWLWKVGFSRNAALSSFL 130
                    HQLG S   P I  C L+AC    +  LG QVHGWL K+G   +  LSS L
Sbjct: 124 ---------HQLGMSEFPPWICACFLKACACIENIPLGMQVHGWLLKLGTCDHVLLSSSL 174

Query: 129 ISFYGKLRHHEGGERVFEQVDCRDTAVWTSRMVNCCNDDNF 7
           I FYG+    +    VF ++   +T+ WT+++V+ C + +F
Sbjct: 175 IRFYGRFTCVKDANAVFNKLSRHNTSTWTAKIVSGCREMDF 215


>ref|XP_003612457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513792|gb|AES95415.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 418

 Score =  187 bits (474), Expect = 2e-45
 Identities = 105/223 (47%), Positives = 135/223 (60%), Gaps = 1/223 (0%)
 Frame = -1

Query: 672 PANKPNRKPGATTSDILRLMDGLKLPIPIDIYTSLIKECTESGDPFKAIELHEHIRRSGI 493
           P     R+   TTS IL LMD L  PI IDIYTSL+KECT S DP  AIELH  I   GI
Sbjct: 62  PKKSKRRRKCDTTSHILPLMDALHFPITIDIYTSLVKECTLSTDPETAIELHTQIITRGI 121

Query: 492 RPSLSVANRILLMYVSSGCFEHARHLFDEMSVRDFNSWAILIAGCVENGEHGEATKLFVK 313
              L++ NRIL+M+VS G  E+AR +FD MSVRDF+SWA L     ENGE+  A  +FV 
Sbjct: 122 ELPLTLLNRILIMFVSCGLLENARRVFDVMSVRDFHSWATLFVSYYENGEYENAIDVFVS 181

Query: 312 MLRDKELDTAGAHQLGFSV-PGILVCVLRACVFTMDFELGRQVHGWLWKVGFSRNAALSS 136
           ML   ++       +GFS  P I  C+L+AC  TM+  LG QVHG L K+G   +  +SS
Sbjct: 182 MLCQLDV-------MGFSFPPWIWSCLLKACACTMNVPLGMQVHGCLLKLGACDHVLISS 234

Query: 135 FLISFYGKLRHHEGGERVFEQVDCRDTAVWTSRMVNCCNDDNF 7
            LI FYG+ +  E    VF +V   +T  WT+++V+ C + +F
Sbjct: 235 SLIRFYGRFKCLEDANMVFNRVSRHNTLTWTAKIVSSCRERHF 277


>ref|XP_002519945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540991|gb|EEF42549.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 403

 Score =  167 bits (422), Expect = 2e-39
 Identities = 90/224 (40%), Positives = 138/224 (61%), Gaps = 2/224 (0%)
 Frame = -1

Query: 672 PANKPNRKPGATTSDILRLMDGLKLPIPIDIYTSLIKECTESGDPFKAIELHEH-IRRSG 496
           P N    K   ++SDI+RLMD L  PIP DIYTSLIKECT + D  +A+ LH H I ++ 
Sbjct: 45  PINHLPAKKSCSSSDIMRLMDSLCHPIPPDIYTSLIKECTLTSDSTEALCLHSHLISQTN 104

Query: 495 IRPSLSVANRILLMYVSSGCFEHARHLFDEMSVR-DFNSWAILIAGCVENGEHGEATKLF 319
           ++ +  + +R+LLM+VS G  + AR+LFD+M ++ DF SW I+I GC  N ++     LF
Sbjct: 105 LKLTPPLVHRLLLMHVSCGQLDIARNLFDKMPLKKDFISWVIVIVGCFSNSKYEAGINLF 164

Query: 318 VKMLRDKELDTAGAHQLGFSVPGILVCVLRACVFTMDFELGRQVHGWLWKVGFSRNAALS 139
           + ML    +       L  +   I++C+++ C+++M+  LG+QVHG L+KVG +   + +
Sbjct: 165 IDMLLQHSVYDGLMFDLN-TWNIIILCIIKCCIYSMNISLGKQVHGILFKVGLTSEISFN 223

Query: 138 SFLISFYGKLRHHEGGERVFEQVDCRDTAVWTSRMVNCCNDDNF 7
             L+ FYGKL   E    VF ++D  +TA WT+++VN C +  F
Sbjct: 224 VSLMDFYGKLGCLEDVNSVFNKLDNHNTATWTAKIVNSCRNQRF 267



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 2/194 (1%)
 Frame = -1

Query: 582 IYTSLIKECTESGDPFKAIELHEHIRRSGIRPSLSVANRILLMYVSSGCFEHARHLFDEM 403
           I   +IK C  S +     ++H  + + G+   +S    ++  Y   GC E    +F+++
Sbjct: 187 IILCIIKCCIYSMNISLGKQVHGILFKVGLTSEISFNVSLMDFYGKLGCLEDVNSVFNKL 246

Query: 402 SVRDFNSWAILIAGCVENGEHGEATKLFVKMLRDKELDTAGAHQLGFSVPGILVCVLRAC 223
              +  +W   I     N    E  + F      KE+  AG  +  F+V      VLRAC
Sbjct: 247 DNHNTATWTAKIVNSCRNQRFYEVIEDF------KEMGEAGIKRNSFTVSS----VLRAC 296

Query: 222 VFTMDF-ELGRQVHGWLWKVGFSRNAALSSFLISFYGKLRHHEGGERVFEQV-DCRDTAV 49
               D    G+QVH  + K+G   +A +   LI+ YGK       ++VFE V D  +TA 
Sbjct: 297 ARMGDGGNCGKQVHVIVIKLGLESDAFVQCGLIAMYGKCGMIRKAKKVFELVIDKTNTAC 356

Query: 48  WTSRMVNCCNDDNF 7
           W + ++    ++ F
Sbjct: 357 WNALLMAYVRNELF 370


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