BLASTX nr result

ID: Salvia21_contig00021214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00021214
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002452333.1| hypothetical protein SORBIDRAFT_04g023880 [S...    58   4e-13
ref|XP_002457671.1| hypothetical protein SORBIDRAFT_03g011415 [S...    79   9e-13
ref|XP_002453763.1| hypothetical protein SORBIDRAFT_04g014351 [S...    56   3e-12
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...    75   2e-11
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    73   6e-11

>ref|XP_002452333.1| hypothetical protein SORBIDRAFT_04g023880 [Sorghum bicolor]
           gi|241932164|gb|EES05309.1| hypothetical protein
           SORBIDRAFT_04g023880 [Sorghum bicolor]
          Length = 925

 Score = 57.8 bits (138), Expect(2) = 4e-13
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
 Frame = +2

Query: 425 QSKNFHVELKNITSKI-----EKLTEVEEIHWKQRSRANWLGLGDRNTKYFHAFASNRKK 589
           QSK  H++  ++ + +     + L + EE H +QR++ NW  LGDRNT YFH   + R +
Sbjct: 165 QSKPPHLQDFDVQNHLAMQHEQLLIKNEEFH-RQRAKKNWANLGDRNTAYFHQSITKRTR 223

Query: 590 KNRISMLIRDDGXXXXXXXXXXXXXXGYFAELFQSSE 700
           KN+IS L   DG               YF  LF +++
Sbjct: 224 KNKISSLQNPDGTFSITHQQIANTLNSYFTNLFNTTD 260



 Score = 42.7 bits (99), Expect(2) = 4e-13
 Identities = 31/94 (32%), Positives = 40/94 (42%)
 Frame = +1

Query: 100 TWSNQRKGNEARFLVLDRFLCNRMVDDVFELSTVKALDPHGSDHTPLLLSLNTRDDRLVP 279
           TW+N+R      F  LDR L N      F  STV  L    SDH P+L  L +   +   
Sbjct: 40  TWTNKRFNTIPTFQRLDRSLGNANWCSAFPSSTVFHLPMLKSDHAPILTMLKSSISKT-- 97

Query: 280 GNGSKRFYFEQKWLLDKMFAADFLVKWTNQGHQS 381
              +K F FE  WLL++ F       W     +S
Sbjct: 98  ---AKPFRFENYWLLEQDFNEVARSSWDRSASRS 128


>ref|XP_002457671.1| hypothetical protein SORBIDRAFT_03g011415 [Sorghum bicolor]
           gi|241929646|gb|EES02791.1| hypothetical protein
           SORBIDRAFT_03g011415 [Sorghum bicolor]
          Length = 335

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
 Frame = +2

Query: 452 KNITSKIEKLTEVEEIHWKQRSRANWLGLGDRNTKYFHAFASNRKKKNRISMLIRDDGXX 631
           K I  ++E + E EEIHW QRSRANWL  GDRNT +FH FA+ R+KKN I  L+ ++G  
Sbjct: 47  KEIMVRLELMLEQEEIHWFQRSRANWLRQGDRNTSFFHNFATKRRKKNTIKGLMDENGQR 106

Query: 632 XXXXXXXXXXXXGYFAELFQS--SEPSPTQIDEVT 730
                        YF  +F S   +P P+ + +V+
Sbjct: 107 QENEIAMRNIIQNYFENIFTSEVGDPDPSVLADVS 141


>ref|XP_002453763.1| hypothetical protein SORBIDRAFT_04g014351 [Sorghum bicolor]
           gi|241933594|gb|EES06739.1| hypothetical protein
           SORBIDRAFT_04g014351 [Sorghum bicolor]
          Length = 1054

 Score = 56.2 bits (134), Expect(2) = 3e-12
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
 Frame = +2

Query: 422 VQSKNFHVELKN------ITSKIEKLTEVEEIHWKQRSRANWLGLGDRNTKYFHAFASNR 583
           +Q+++ H  L++      +T + ++L E +E    QR++ NW  LGDRNT YFH     R
Sbjct: 127 LQAQSLHPSLQDYTLQERLTRQHQQLIEKDEHFHLQRAKKNWAQLGDRNTSYFHQAIIKR 186

Query: 584 KKKNRISMLIRDDGXXXXXXXXXXXXXXGYFAELF 688
            +KNRI+ L   DG               YF ++F
Sbjct: 187 TRKNRITYLQNPDGTESVTHDQLAQTLSNYFYDIF 221



 Score = 41.6 bits (96), Expect(2) = 3e-12
 Identities = 27/95 (28%), Positives = 45/95 (47%)
 Frame = +1

Query: 94  AVTWSNQRKGNEARFLVLDRFLCNRMVDDVFELSTVKALDPHGSDHTPLLLSLNTRDDRL 273
           A TW+N+R  +   F  LDR   N     ++  ++V  L    SDHTP+L  L++     
Sbjct: 3   AYTWTNKRFTSAPTFQRLDRCFANAEWCMIYPRTSVFHLPMLNSDHTPILTLLDSHH--- 59

Query: 274 VPGNGSKRFYFEQKWLLDKMFAADFLVKWTNQGHQ 378
              + +K F FE  WLL++ + +     W    ++
Sbjct: 60  --RSTTKPFRFENWWLLEEDYTSVAKNSWAKSANK 92


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 40/108 (37%), Positives = 57/108 (52%)
 Frame = +2

Query: 464 SKIEKLTEVEEIHWKQRSRANWLGLGDRNTKYFHAFASNRKKKNRISMLIRDDGXXXXXX 643
           S +EK + +EE  W Q+SRANW+ LGD NTK+FHA+A  R+ +N I  LI +DG      
Sbjct: 14  SSLEKWSTIEEKIWMQKSRANWIQLGDSNTKFFHAYAKERRCQNNIKFLITEDGTRIDKH 73

Query: 644 XXXXXXXXGYFAELFQSSEPSPTQIDEVTDTCGSFLGEGAKVELSSPF 787
                   G++ +L  SS  S   +D+     G  L +  +  L S F
Sbjct: 74  NLIKEEIRGFYLKLMGSSVDSLPMVDKNVVKRGPMLSQHQQDLLCSKF 121


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = +2

Query: 467 KIEKLTEVEEIHWKQRSRANWLGLGDRNTKYFHAFASNRKKKNRISMLIRDDGXXXXXXX 646
           ++EKL +  +I+WKQR+  NWL  GDRNT +FHA  S R+++NRI+ L R+DG       
Sbjct: 580 RLEKLEQQVDIYWKQRAHTNWLNKGDRNTSFFHASCSERRRRNRINKLRREDGSWVEREE 639

Query: 647 XXXXXXXGYFAELFQSS--EPSPTQIDEVTDTCGSFLGEGAKVELS 778
                   +F +LF S+  + S   +D V       + E  + E +
Sbjct: 640 DKRAMIIEFFKQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFT 685


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