BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00021146
         (2547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope...   962   0.0  
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              934   0.0  
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   934   0.0  
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac...   919   0.0  
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   865   0.0  

>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1127

 Score =  962 bits (2488), Expect = 0.0
 Identities = 505/864 (58%), Positives = 615/864 (71%), Gaps = 15/864 (1%)
 Frame = +1

Query: 1    AQQLAMFVPEALSAPAVMKSR-NGPLWTASQILQTTFPPSFDCSGERHRICKSEVLYLDY 177
            AQQLAMF+P AL   AV+  R +G +WT  QIL    P  FD  GE H I KS+ L +DY
Sbjct: 65   AQQLAMFLPMALPDSAVVDVRKSGAMWTTLQILGAALPDGFDSCGETHTIGKSQFLGIDY 124

Query: 178  NRDVMASIINDIVTSLFFLKGPKEVLRFFNSIQPLSMESLHTEGFSVSLKDFFLTRDVLE 357
            +RD+++SI+ND++TS++F+KGP +VL+FFNS+QPL ME+L TEGFS+SL+DF++T+ V +
Sbjct: 125  HRDLISSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSISLRDFYMTKAVRD 184

Query: 358  DIQKEIQKIFPLLCDLRASYSESVALQVDSYLRSVKIPVTNFIRESSAIGNLIDSKSESA 537
             IQ+ IQ +  LL  LR+SY+ESV +Q++ +LR+ K+PV +F+ +SS +G LIDSKSESA
Sbjct: 185  GIQERIQCMSKLLHHLRSSYNESVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKSESA 244

Query: 538  LSKVVQQIGFLGIQISSKGKFYSETLVKDMSSLFQKKYPSYDDSPYEEFGLVGRPLFRGL 717
             +KVVQQIGFLG+QIS +GKFY  TLV DM+ LFQKKYPS   +P EEFGLV   LF GL
Sbjct: 245  FNKVVQQIGFLGLQISDRGKFYXXTLVHDMAQLFQKKYPSVGTNPSEEFGLVRSCLFYGL 304

Query: 718  DPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKNLMAILRDVVICYDGSVRNTCSNSIVQFE 897
            DPYQ M+H             GLTEPGTLF NLMAILRDVVICYDG+VRN  SNSI+QFE
Sbjct: 305  DPYQGMIHSISSREVIVRSTRGLTEPGTLFXNLMAILRDVVICYDGTVRNVSSNSIIQFE 364

Query: 898  YGVNS-ANVASEFCAGDPVGVLAATAMSNPAYKAVLDXXXXXXXXWDMMKEILLCGVGFK 1074
            YG +  +N+ SEFCAGDPVGVLAATAMSNPAYKA LD        W+MMKEILLCGV FK
Sbjct: 365  YGSSGGSNLPSEFCAGDPVGVLAATAMSNPAYKAXLDSSPSSNSSWEMMKEILLCGVSFK 424

Query: 1075 NDIADRRVILYLNNCDCGRKHCQESAALIVKNHLKKVSLKDTAMEFLMEYRSQLVPESDD 1254
            ND++DRRVILYLN+C C R +C+E AA +VKNHL KV LKD A EFL+EY  +     + 
Sbjct: 425  NDVSDRRVILYLNDCGCRRGYCREKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENS 484

Query: 1255 VTSGLLVGHIHLNKTQLIQSNISINDILEKCLDTISLNQKKKKVGTLFKRIELXXXXXXX 1434
             T   L+GHI LN+ QL    IS+ ++ E+C + IS  + KKK+G LFKRI L       
Sbjct: 485  ETGTGLIGHIRLNQGQLENLGISVLEVHERCQENISSFRXKKKIGNLFKRIVLSVSEFCS 544

Query: 1435 XXXXXXXKWTDVPCVQFLWQGASDDLLERASDFLADTVCPVLLQTVIKGDPRVSAANVIW 1614
                   K  + PC++F W  ASDD LER S  LAD + P+LL TVIKGDPRVS+AN+ W
Sbjct: 545  FCHNSGSKCLNAPCLRFSWPDASDDHLERVSHILADMIXPILLDTVIKGDPRVSSANIAW 604

Query: 1615 ISPDTATWIRSPCKSPKGELAVDITLEKDAVKRSGDAWRVVMDSCLPVFHLIDAQRSIPY 1794
            ISPDT +WIRSP KS +GELA+DI LEK+AVK  GDAWR +MDSCLPV HLID  RSIPY
Sbjct: 605  ISPDTMSWIRSPSKSQRGELALDIVLEKEAVKXRGDAWRXLMDSCLPVIHLIDTTRSIPY 664

Query: 1795 AIKQVENLLGISCAFEQAVQRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNAGGIK 1974
            AIKQV+ L+GISCAFEQAV RLSTSVTMVTKGVLKDHL+LL NSMTCAG L+GFNAGGIK
Sbjct: 665  AIKQVQELIGISCAFEQAVXRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIK 724

Query: 1975 SLSKSLGVQVPFMNATLFTPRKCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEIV 2154
            +LS+SL VQ+PF  ATLFTPRKCFERAAEKC+VD+LSSIV SC+WGKHV+VGTGS FE++
Sbjct: 725  ALSRSLNVQIPFTEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVL 784

Query: 2155 WGTKNSELMVDEEIDVYNFLRMV-NSSKLEDTGTSCLGAEIXXXXXXXXXXXXLSPVRES 2331
              T+N E  + +  DVY+FL +V N+S  E  GTSCLGAEI            LSP R+S
Sbjct: 785  LNTRNVEWNIPDTRDVYSFLHLVRNTSAQEVEGTSCLGAEIDELEEDEDMGLYLSPNRDS 844

Query: 2332 GADKPTFEDGIDF----RLDGDNNDGLSKEDDXXXXXXXXXXXXXXXDWATTAED----- 2484
            G++ PTFED  +F     LD     G + E+                     AE+     
Sbjct: 845  GSEMPTFEDRAEFDYNENLDEGKPSGSAWEEASSGSVKSGGSWDMAGKTQNGAEEGVNQS 904

Query: 2485 ---SAWGKKVDSEENGWAKSNKAE 2547
               S+WGKKVD  EN   +S   E
Sbjct: 905  DSWSSWGKKVDEPENNRQQSGSGE 928


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  934 bits (2415), Expect = 0.0
 Identities = 476/802 (59%), Positives = 588/802 (73%), Gaps = 5/802 (0%)
 Frame = +1

Query: 1    AQQLAMFVPEALSAPAVMKSR-NGPLWTASQILQTTFPPSFDCSGERHRICKSEVLYLDY 177
            AQQL MFV  +L  PA++KS  +GP WTA QILQT  P  FDC GERH I KS +L +DY
Sbjct: 573  AQQLVMFVSMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIGERHWISKSAILKVDY 632

Query: 178  NRDVMASIINDIVTSLFFLKGPKEVLRFFNSIQPLSMESLHTEGFSVSLKDFFLTRDVLE 357
            NRDV+ S++N+IVTS+F  KGP EVL+FF+S+QPL ME+L +EGFSVSL+DF +  +V +
Sbjct: 633  NRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQ 692

Query: 358  DIQKEIQKIFPLLCDLRASYSESVALQVDSYLRSVKIPVTNFIRESSAIGNLIDSKSESA 537
            +IQK ++ I  LL +LR+ Y+E + LQ +++LR  K+PV NFI  SSA+GNLIDSKS+SA
Sbjct: 693  NIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSA 752

Query: 538  LSKVVQQIGFLGIQISSKGKFYSETLVKDMSSLFQKKYPSYD-DSPYEEFGLVGRPLFRG 714
            ++KVVQQIGFLG Q+S KGKFYS TLV+ M+ LF+ KYP +  D P  EFGL+    F G
Sbjct: 753  INKVVQQIGFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHG 812

Query: 715  LDPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKNLMAILRDVVICYDGSVRNTCSNSIVQF 894
            LDPY+EMVH             GL+EPGTLFKNLMAILRDVVICYDG+VRN CSNSI+QF
Sbjct: 813  LDPYEEMVHSISTREIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQF 872

Query: 895  EYGVNSANVASEFC-AGDPVGVLAATAMSNPAYKAVLDXXXXXXXXWDMMKEILLCGVGF 1071
            EYGV +      F  AG+PVGVLAATAMSNPAYKAVLD        W++MKEILLC V F
Sbjct: 873  EYGVKARTKPQHFFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNF 932

Query: 1072 KNDIADRRVILYLNNCDCGRKHCQESAALIVKNHLKKVSLKDTAMEFLMEYRSQLVPESD 1251
            KND+ DRRVILYLN+CDCGRK+C+E+AA +VKN LKK SLKDTA+EF++EY  Q      
Sbjct: 933  KNDLIDRRVILYLNDCDCGRKYCRENAAYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGS 992

Query: 1252 DVTSGLLVGHIHLNKTQLIQSNISINDILEKCLDTISLNQKKKKVGTLFKRIELXXXXXX 1431
                  LVGHIHLNK  L   N+S+ ++ +KC +TI+  +KKK VG  FK+I L      
Sbjct: 993  SEPGTGLVGHIHLNKLLLQDLNVSMQEVCQKCEETINSFRKKKNVGPFFKKIILSFRECC 1052

Query: 1432 XXXXXXXXKWTDVPCVQFLWQGASDDLLERASDFLADTVCPVLLQTVIKGDPRVSAANVI 1611
                    K +D+PC+ F WQG  DD LE+    LA  +CPVLLQT+IKGD RV   N+I
Sbjct: 1053 TFQHSCQSKGSDMPCLLFFWQGNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNII 1112

Query: 1612 WISPDTATWIRSPCKSPKGELAVDITLEKDAVKRSGDAWRVVMDSCLPVFHLIDAQRSIP 1791
            WISPDT TWIR+PCKS KGELA+DI LEK AVK+ GDAWR+V+D+CLPV HLID +RSIP
Sbjct: 1113 WISPDTTTWIRNPCKSRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIP 1172

Query: 1792 YAIKQVENLLGISCAFEQAVQRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNAGGI 1971
            YAIKQV+ LLGISCAF+QAVQRLS SVTMV KGVLK+HL+LL NSMTCAG LIGFN+GG 
Sbjct: 1173 YAIKQVQELLGISCAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGY 1232

Query: 1972 KSLSKSLGVQVPFMNATLFTPRKCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEI 2151
            K+LS++L +QVPF  ATLFTPRKCFE+A+EKC+ D+LSSIV SC+WGKHV+VGTGS F++
Sbjct: 1233 KALSRALNLQVPFTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDV 1292

Query: 2152 VWGTKNSELMVDEEIDVYNFLRMVNSSKL-EDTGTSCLGAEI-XXXXXXXXXXXXLSPVR 2325
            +W TK      D  ID+Y+FL +V S    ++  T+CLGAE+             +SP  
Sbjct: 1293 LWDTKEIGPAQDGGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEH 1352

Query: 2326 ESGADKPTFEDGIDFRLDGDNN 2391
             S  +KP FED  +F+   +N+
Sbjct: 1353 SSNFEKPVFEDSAEFQNTWENH 1374


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  934 bits (2415), Expect = 0.0
 Identities = 476/802 (59%), Positives = 588/802 (73%), Gaps = 5/802 (0%)
 Frame = +1

Query: 1    AQQLAMFVPEALSAPAVMKSR-NGPLWTASQILQTTFPPSFDCSGERHRICKSEVLYLDY 177
            AQQL MFV  +L  PA++KS  +GP WTA QILQT  P  FDC GERH I KS +L +DY
Sbjct: 513  AQQLVMFVSMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIGERHWISKSAILKVDY 572

Query: 178  NRDVMASIINDIVTSLFFLKGPKEVLRFFNSIQPLSMESLHTEGFSVSLKDFFLTRDVLE 357
            NRDV+ S++N+IVTS+F  KGP EVL+FF+S+QPL ME+L +EGFSVSL+DF +  +V +
Sbjct: 573  NRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQ 632

Query: 358  DIQKEIQKIFPLLCDLRASYSESVALQVDSYLRSVKIPVTNFIRESSAIGNLIDSKSESA 537
            +IQK ++ I  LL +LR+ Y+E + LQ +++LR  K+PV NFI  SSA+GNLIDSKS+SA
Sbjct: 633  NIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSA 692

Query: 538  LSKVVQQIGFLGIQISSKGKFYSETLVKDMSSLFQKKYPSYD-DSPYEEFGLVGRPLFRG 714
            ++KVVQQIGFLG Q+S KGKFYS TLV+ M+ LF+ KYP +  D P  EFGL+    F G
Sbjct: 693  INKVVQQIGFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHG 752

Query: 715  LDPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKNLMAILRDVVICYDGSVRNTCSNSIVQF 894
            LDPY+EMVH             GL+EPGTLFKNLMAILRDVVICYDG+VRN CSNSI+QF
Sbjct: 753  LDPYEEMVHSISTREIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQF 812

Query: 895  EYGVNSANVASEFC-AGDPVGVLAATAMSNPAYKAVLDXXXXXXXXWDMMKEILLCGVGF 1071
            EYGV +      F  AG+PVGVLAATAMSNPAYKAVLD        W++MKEILLC V F
Sbjct: 813  EYGVKARTKPQHFFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNF 872

Query: 1072 KNDIADRRVILYLNNCDCGRKHCQESAALIVKNHLKKVSLKDTAMEFLMEYRSQLVPESD 1251
            KND+ DRRVILYLN+CDCGRK+C+E+AA +VKN LKK SLKDTA+EF++EY  Q      
Sbjct: 873  KNDLIDRRVILYLNDCDCGRKYCRENAAYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGS 932

Query: 1252 DVTSGLLVGHIHLNKTQLIQSNISINDILEKCLDTISLNQKKKKVGTLFKRIELXXXXXX 1431
                  LVGHIHLNK  L   N+S+ ++ +KC +TI+  +KKK VG  FK+I L      
Sbjct: 933  SEPGTGLVGHIHLNKLLLQDLNVSMQEVCQKCEETINSFRKKKNVGPFFKKIILSFRECC 992

Query: 1432 XXXXXXXXKWTDVPCVQFLWQGASDDLLERASDFLADTVCPVLLQTVIKGDPRVSAANVI 1611
                    K +D+PC+ F WQG  DD LE+    LA  +CPVLLQT+IKGD RV   N+I
Sbjct: 993  TFQHSCQSKGSDMPCLLFFWQGNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNII 1052

Query: 1612 WISPDTATWIRSPCKSPKGELAVDITLEKDAVKRSGDAWRVVMDSCLPVFHLIDAQRSIP 1791
            WISPDT TWIR+PCKS KGELA+DI LEK AVK+ GDAWR+V+D+CLPV HLID +RSIP
Sbjct: 1053 WISPDTTTWIRNPCKSRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIP 1112

Query: 1792 YAIKQVENLLGISCAFEQAVQRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNAGGI 1971
            YAIKQV+ LLGISCAF+QAVQRLS SVTMV KGVLK+HL+LL NSMTCAG LIGFN+GG 
Sbjct: 1113 YAIKQVQELLGISCAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGY 1172

Query: 1972 KSLSKSLGVQVPFMNATLFTPRKCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGSPFEI 2151
            K+LS++L +QVPF  ATLFTPRKCFE+A+EKC+ D+LSSIV SC+WGKHV+VGTGS F++
Sbjct: 1173 KALSRALNLQVPFTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDV 1232

Query: 2152 VWGTKNSELMVDEEIDVYNFLRMVNSSKL-EDTGTSCLGAEI-XXXXXXXXXXXXLSPVR 2325
            +W TK      D  ID+Y+FL +V S    ++  T+CLGAE+             +SP  
Sbjct: 1233 LWDTKEIGPAQDGGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEH 1292

Query: 2326 ESGADKPTFEDGIDFRLDGDNN 2391
             S  +KP FED  +F+   +N+
Sbjct: 1293 SSNFEKPVFEDSAEFQNTWENH 1314


>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
          Length = 1902

 Score =  919 bits (2375), Expect = 0.0
 Identities = 472/870 (54%), Positives = 606/870 (69%), Gaps = 21/870 (2%)
 Frame = +1

Query: 1    AQQLAMFVPEALSAPAVMKS-----------RNGPLWTASQILQTTFPPSFDCSGERHRI 147
            A QLAM+    L +PA+ K+            +GP WTA Q+LQT  P  F+C G+R  I
Sbjct: 304  ANQLAMYASSLLPSPALWKACSSNAKKKKAHSSGPRWTAQQVLQTALPSHFECHGDRLLI 363

Query: 148  CKSEVLYLDYNRDVMASIINDIVTSLFFLKGPKEVLRFFNSIQPLSMESLHTEGFSVSLK 327
              SE+L LD+NRD++AS+I+D++TSLFF K PK+ L FF+S+QPL ME+L +EGFSVSL 
Sbjct: 364  HDSEILKLDFNRDIVASVISDVLTSLFFNKSPKDALDFFDSLQPLLMENLFSEGFSVSLH 423

Query: 328  DFFLTRDVLEDIQKEIQKIFPLLCDLRASYSESVALQVDSYLRSVKIPVTNFIRESSAIG 507
            DFF  +  L++IQ+ IQ + PLL  LR+S++E V +Q ++++R  K PV NFI  SSA+G
Sbjct: 424  DFFFPKSELQNIQRNIQDLSPLLLQLRSSFNELVQVQFENHIREFKSPVGNFILISSALG 483

Query: 508  NLIDSKSESALSKVVQQIGFLGIQISSKGKFYSETLVKDMSSLFQKKYPSYDDSPYEEFG 687
            ++IDS+S+SA+ K+VQQIGFLG+Q+S + KFYS  LV+D++SLF +KYP  D  P EEFG
Sbjct: 484  SMIDSRSDSAIDKIVQQIGFLGLQLSDRRKFYSRGLVEDVASLFHQKYPFADVYPSEEFG 543

Query: 688  LVGRPLFRGLDPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKNLMAILRDVVICYDGSVRN 867
             V R  F GLDPY+E+VH             GL EPGTLFKNLMA+LRDVVICYDG+VRN
Sbjct: 544  FVSRCFFHGLDPYEEIVHSIATREVIVRSSKGLAEPGTLFKNLMAVLRDVVICYDGTVRN 603

Query: 868  TCSNSIVQFEYGVNSANVASEFCAGDPVGVLAATAMSNPAYKAVLDXXXXXXXXWDMMKE 1047
              SNS++QFEYGV      + F AGDPVGVLAATAMSNPAYKAVLD        WDMMKE
Sbjct: 604  ISSNSVIQFEYGVGGMQSQNLFPAGDPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKE 663

Query: 1048 ILLCGVGFKNDIADRRVILYLNNCDCGRKHCQESAALIVKNHLKKVSLKDTAMEFLMEY- 1224
            IL C   F+NDI DRRVILYLN+C CGRK+CQE+A+ +VKNHLKKVSL+D A+E  +EY 
Sbjct: 664  ILFCRANFRNDINDRRVILYLNDCCCGRKYCQENASCLVKNHLKKVSLRDAAIELAIEYK 723

Query: 1225 RSQLVPESDDVTSGLLVGHIHLNKTQLIQSNISINDILEKCLDTISLNQKKKKVGTLFKR 1404
            R +L PES ++ +G LVGHIHLN   L  S I ++DIL+KC + ++L +KKKK G  FKR
Sbjct: 724  RPKLEPESCEIDAG-LVGHIHLNSGLLKASGIGMHDILQKCEEQVNLLRKKKKYGYHFKR 782

Query: 1405 IELXXXXXXXXXXXXXXKWTDVPCVQFLWQGASDDLLERASDFLADTVCPVLLQTVIKGD 1584
            I L              KWTD+PC++F WQ  +D  LER    +AD +CPVLL T+IKGD
Sbjct: 783  I-LLSVSDCCFFNHSDSKWTDMPCLKFFWQDMTDTDLERTKHIMADMICPVLLDTIIKGD 841

Query: 1585 PRVSAANVIWISPDTATWIRSPCKSPKGELAVDITLEKDAVKRSGDAWRVVMDSCLPVFH 1764
            PR+S  N+IWI+P T TW++SPC S KGELAV++ LEK+AV+ +GDAWR+V+D CLPVFH
Sbjct: 842  PRISTVNIIWINPGTTTWVQSPCSSTKGELAVEVALEKEAVRLTGDAWRIVLDCCLPVFH 901

Query: 1765 LIDAQRSIPYAIKQVENLLGISCAFEQAVQRLSTSVTMVTKGVLKDHLLLLGNSMTCAGT 1944
            LID +RSIPYAIKQ+++L GISCAF+QAVQRLSTSVTMVTKGVLK+HLLLL +SMTCAG 
Sbjct: 902  LIDTRRSIPYAIKQIQDLFGISCAFDQAVQRLSTSVTMVTKGVLKEHLLLLASSMTCAGN 961

Query: 1945 LIGFNAGGIKSLSKSLGVQVPFMNATLFTPRKCFERAAEKCNVDNLSSIVGSCAWGKHVS 2124
            L+GFN  GIK+L ++L VQVPF  ATL+TPRKCFERA+EKC+VD L+SIVGSC+WGK VS
Sbjct: 962  LVGFNTSGIKALCRALNVQVPFTEATLYTPRKCFERASEKCHVDTLASIVGSCSWGKRVS 1021

Query: 2125 VGTGSPFEIVWGTKNSELMVDEEIDVYNFLRMVNSSKLEDTGTSCLGAEIXXXXXXXXXX 2304
            +GTG+ F+++W TK  E M D+  DVYNFL +V+S+  E+  +  LG +I          
Sbjct: 1022 IGTGAKFDLLWETKEIE-MADKPTDVYNFLHLVSSANEEEVDSGGLGEDIESFEKDVYME 1080

Query: 2305 XXLSPVRESGADKPTFEDGIDFRLDGDNNDGLSKEDDXXXXXXXXXXXXXXXDWATTAED 2484
              LSP +E   +K  FE+ ++  +D D         D                 + +AE 
Sbjct: 1081 PALSPEQE---NKAVFEETLEIGVDSDITGADESSWDAFPSSGTGWNANKIDTGSGSAEG 1137

Query: 2485 --SAWGKKVD-------SEENGWAKSNKAE 2547
              S+WG K D       S+  GW+     +
Sbjct: 1138 GWSSWGSKKDQANPEDSSKTGGWSSGGSKQ 1167


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  865 bits (2234), Expect = 0.0
 Identities = 452/810 (55%), Positives = 575/810 (70%), Gaps = 8/810 (0%)
 Frame = +1

Query: 1    AQQLAMFVPEALSAPAVMKSRNGPL-WTASQILQTTFPPSFDCSGERHRICKSEVLYLDY 177
            AQQLAMFV   L  PA++  R+G L WTA QILQT  P SFDC G+ + I  S  L  D+
Sbjct: 513  AQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPASFDCHGDSYLIKNSNFLKFDF 572

Query: 178  NRDVMASIINDIVTSLFFLKGPKEVLRFFNSIQPLSMESLHTEGFSVSLKDFFLTRDVLE 357
            +RD M S+IN+I+TS+FF KGP+EVL+FF+S+QPL ME + +EGFSV L D+ +    L+
Sbjct: 573  DRDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQ 632

Query: 358  DIQKEIQKIFPLLCDLRASYSESVALQVDSYLRSVKIPVTNFIRESSAIGNLIDSKSESA 537
             +QK IQ + PLL  LR++++E V LQ++++LRSVK+P TNFI + S++G L DSKSESA
Sbjct: 633  ALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSLGKLFDSKSESA 692

Query: 538  LSKVVQQIGFLGIQISSKGKFYSETLVKDMSSLFQKKYPSYD-DSPYEEFGLVGRPLFRG 714
            ++KVVQQIGFLG+Q+S KG+FYS++L++D++SLF  +Y S   D P  EFGLV    F G
Sbjct: 693  INKVVQQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHG 752

Query: 715  LDPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKNLMAILRDVVICYDGSVRNTCSNSIVQF 894
            LDPY+EMVH             GLTEPGTLFKNLMAILRDVVICYDG+VRN CSNSI+Q 
Sbjct: 753  LDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQL 812

Query: 895  EYGVNSANVA--SEFCAGDPVGVLAATAMSNPAYKAVLDXXXXXXXXWDMMKEILLCGVG 1068
            EYG+ +  +   S F  G+PVGVLAATAMS PAYKAVLD        WDMMKEILLC V 
Sbjct: 813  EYGMKAGMMQPYSLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWDMMKEILLCKVS 872

Query: 1069 FKNDIADRRVILYLNNCDCGRKHCQESAALIVKNHLKKVSLKDTAMEFLMEYRSQLVPES 1248
            FKN+  DRRVILYLNNC CGRK+C E+AA +VK+HLKKV+LKD AM+F++EY  Q  P  
Sbjct: 873  FKNEPIDRRVILYLNNCACGRKYCNENAAYVVKSHLKKVTLKDAAMDFMIEYNRQPTP-- 930

Query: 1249 DDVTSGL---LVGHIHLNKTQLIQSNISINDILEKCLDTISLNQKKKKVGTLFKRIELXX 1419
                SGL   LVGH+HLN+  L + NI + ++L +C +T+S  +KKKK   +   +    
Sbjct: 931  ----SGLGPGLVGHVHLNRMLLKELNIDMTEVLRRCQETMSSFKKKKK--KIAHALRFSI 984

Query: 1420 XXXXXXXXXXXXKWTDVPCVQFLWQGASDDLLERASDFLADTVCPVLLQTVIKGDPRVSA 1599
                        +  D+PC+ F W    D  LER +  LAD V P+L +T+IKGDPR+ +
Sbjct: 985  SEHCAFHQWNGEESIDMPCLIF-WHQTRDVHLERTAHILADIVFPLLSETIIKGDPRIKS 1043

Query: 1600 ANVIWISPDTATWIRSPCKSPKGELAVDITLEKDAVKRSGDAWRVVMDSCLPVFHLIDAQ 1779
            A+VIWISPD+ +W ++P +   GELA+D+ LEK AVK++GDAWR V+D CLPV HLID +
Sbjct: 1044 ASVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVLHLIDTR 1103

Query: 1780 RSIPYAIKQVENLLGISCAFEQAVQRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFN 1959
            RS+PYAIKQV+ LLGISCAF+Q +QRLS SV+MV+KGVL DHL+LL NSMTC G +IGFN
Sbjct: 1104 RSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFN 1163

Query: 1960 AGGIKSLSKSLGVQVPFMNATLFTPRKCFERAAEKCNVDNLSSIVGSCAWGKHVSVGTGS 2139
            +GG K+LS++L +QVPF  ATLFTPRKCFE+AAEKC+ D+LSSIV SC+WGKHV+VGTGS
Sbjct: 1164 SGGYKALSRALNIQVPFTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGS 1223

Query: 2140 PFEIVWGTKNSELMVDEEIDVYNFLRMVNSSKLEDTGTSCLGAEI-XXXXXXXXXXXXLS 2316
             F+I+W  K      D+ +DVYNFL MV S K E+  ++CLG EI             LS
Sbjct: 1224 RFDILWDQKELGCKQDDVVDVYNFLHMVRSGKSEEPTSACLGEEIEDIMVEDEYGELTLS 1283

Query: 2317 PVRESGADKPTFEDGIDFRLDGDNNDGLSK 2406
            P   S ++KP FED  +F    DN  G SK
Sbjct: 1284 PEPFSTSEKPVFEDSAEFEHCLDNYPGESK 1313