BLASTX nr result

ID: Salvia21_contig00021096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00021096
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61344.1| hypothetical protein VITISV_022201 [Vitis vinifera]   169   6e-40
ref|XP_004172408.1| PREDICTED: cleavage and polyadenylation spec...   131   2e-28
ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation spec...   131   2e-28
emb|CBI30994.3| unnamed protein product [Vitis vinifera]              120   3e-25
ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec...   120   3e-25

>emb|CAN61344.1| hypothetical protein VITISV_022201 [Vitis vinifera]
          Length = 299

 Score =  169 bits (429), Expect = 6e-40
 Identities = 97/219 (44%), Positives = 109/219 (49%), Gaps = 13/219 (5%)
 Frame = +2

Query: 89  MMWPPHMPLARGARPFPGMRGFPPNMMGSDGFAYGPVNPDGFPMPDLFGMAPRGFGPY-P 265
           +MWPPHMPLARGARP PGMRGFPP MMG+DGF+Y  V PDGF MPD+FG+ PR F PY P
Sbjct: 83  IMWPPHMPLARGARPIPGMRGFPPVMMGADGFSYSAVPPDGFAMPDIFGVGPRAFPPYGP 142

Query: 266 RFSGDFAGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 445
           RFSGDF GPA                                                  
Sbjct: 143 RFSGDFTGPASGMMFPGRGQPGAVFPASGYGMMMGPGRAPFMGGMGVPAAAPTRAGRPVG 202

Query: 446 XXXXXXXXXXGRSKRDQKAPSSDRNESSDQAKGQDMAGPNDDGRNQ------------QR 589
                       S+   +     R   +D  +    +G +D GR Q            Q 
Sbjct: 203 MPPMFPPPPPPNSQNTNRTKRDQRTPVND--RNDRYSGGSDQGRGQDMAGPDDETQYLQG 260

Query: 590 GKAQQDDHCSGGNSFRNDESESEDEAPRRSRHGEGKKKR 706
            K+QQDD   GGNSFRNDESESEDEAPRRSRHGEGKKKR
Sbjct: 261 LKSQQDDQFGGGNSFRNDESESEDEAPRRSRHGEGKKKR 299


>ref|XP_004172408.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like, partial [Cucumis sativus]
          Length = 331

 Score =  131 bits (329), Expect = 2e-28
 Identities = 56/71 (78%), Positives = 60/71 (84%), Gaps = 3/71 (4%)
 Frame = +2

Query: 89  MMWPPHMPLARGARPFPGMRGFPPNMMGSDGFAYGPVNPDGFPMPDLFGMAPRGFGPY-- 262
           MMWPPHMP+ RGARPF GM+GFPP MMG DG +YGPV PDGFPMPD+FGM PRGFGPY  
Sbjct: 99  MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMTPRGFGPYGP 158

Query: 263 -PRFSGDFAGP 292
            PRFSGDF GP
Sbjct: 159 TPRFSGDFMGP 169



 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
 Frame = +2

Query: 485 KRDQKAPSSDRN-ESSDQAKGQDM--AGPNDDGRNQQRGKAQQDDHCSGGNSFRNDESES 655
           KRDQ+  ++DR     DQ KG ++  +G +++ + +Q  KA  D+    G +FRN+ESES
Sbjct: 242 KRDQRGLTNDRYIVGMDQNKGVEIQSSGRDEEMQYKQGSKAYSDEQYGTGTTFRNEESES 301

Query: 656 EDEAPRRSRHGEGKKKRRSLEADGTAVSGE 745
           EDEAPRRSRHGEGKKKRR  E D TA+S +
Sbjct: 302 EDEAPRRSRHGEGKKKRRGSEGDATAISNQ 331


>ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Cucumis sativus]
          Length = 707

 Score =  131 bits (329), Expect = 2e-28
 Identities = 56/71 (78%), Positives = 60/71 (84%), Gaps = 3/71 (4%)
 Frame = +2

Query: 89  MMWPPHMPLARGARPFPGMRGFPPNMMGSDGFAYGPVNPDGFPMPDLFGMAPRGFGPY-- 262
           MMWPPHMP+ RGARPF GM+GFPP MMG DG +YGPV PDGFPMPD+FGM PRGFGPY  
Sbjct: 475 MMWPPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMTPRGFGPYGP 534

Query: 263 -PRFSGDFAGP 292
            PRFSGDF GP
Sbjct: 535 TPRFSGDFMGP 545



 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
 Frame = +2

Query: 485 KRDQKAPSSDRN-ESSDQAKGQDM--AGPNDDGRNQQRGKAQQDDHCSGGNSFRNDESES 655
           KRDQ+  ++DR     DQ KG ++  +G +++ + +Q  KA  D+    G +FRN+ESES
Sbjct: 618 KRDQRGLTNDRYIVGMDQNKGVEIQSSGRDEEMQYKQGSKAYSDEQYGTGTTFRNEESES 677

Query: 656 EDEAPRRSRHGEGKKKRRSLEADGTAVSGE 745
           EDEAPRRSRHGEGKKKRR  E D TA+S +
Sbjct: 678 EDEAPRRSRHGEGKKKRRGSEGDATAISNQ 707


>emb|CBI30994.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score =  120 bits (302), Expect = 3e-25
 Identities = 53/70 (75%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
 Frame = +2

Query: 89  MMWPPHMPLARGARPFPGMRGFPPNMMGSDGFAYGPVNPDGFPMPDLFGMAPRGFGPY-P 265
           +MWPPHMPLARGARP P MRGFPP MMG+DGF+Y  V PDGF MPD+FG+ PR F PY P
Sbjct: 385 IMWPPHMPLARGARPIPSMRGFPPVMMGADGFSYSAVPPDGFAMPDIFGVGPRAFPPYGP 444

Query: 266 RFSGDFAGPA 295
           RFSGDF GPA
Sbjct: 445 RFSGDFTGPA 454


>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Vitis vinifera]
          Length = 673

 Score =  120 bits (302), Expect = 3e-25
 Identities = 53/70 (75%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
 Frame = +2

Query: 89  MMWPPHMPLARGARPFPGMRGFPPNMMGSDGFAYGPVNPDGFPMPDLFGMAPRGFGPY-P 265
           +MWPPHMPLARGARP P MRGFPP MMG+DGF+Y  V PDGF MPD+FG+ PR F PY P
Sbjct: 458 IMWPPHMPLARGARPIPSMRGFPPVMMGADGFSYSAVPPDGFAMPDIFGVGPRAFPPYGP 517

Query: 266 RFSGDFAGPA 295
           RFSGDF GPA
Sbjct: 518 RFSGDFTGPA 527



 Score =  111 bits (278), Expect = 2e-22
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 4/80 (5%)
 Frame = +2

Query: 479 RSKRDQKAPSSDRNE----SSDQAKGQDMAGPNDDGRNQQRGKAQQDDHCSGGNSFRNDE 646
           R+KRDQ+ P +DRN+     SDQ +GQDMAGP+D+ +  Q  K+QQDD   GGNSFRNDE
Sbjct: 594 RTKRDQRTPVNDRNDRYSGGSDQGRGQDMAGPDDETQYLQGLKSQQDDQFGGGNSFRNDE 653

Query: 647 SESEDEAPRRSRHGEGKKKR 706
           SESEDEAPRRSRHGEGKKKR
Sbjct: 654 SESEDEAPRRSRHGEGKKKR 673


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