BLASTX nr result

ID: Salvia21_contig00021028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00021028
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF43947.1|AC012188_24 Contains similarity to DNA Pol III Gam...    69   5e-10
ref|NP_172898.2| AAA-type ATPase family protein [Arabidopsis tha...    69   5e-10
ref|XP_002892809.1| hypothetical protein ARALYDRAFT_888824 [Arab...    69   5e-10
emb|CBI29623.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242...    65   4e-09

>gb|AAF43947.1|AC012188_24 Contains similarity to DNA Pol III Gamma and Tau from Chlamydia
            trachomatis gb|AE001306.1 and contains an AAA (ATPase)
            PF|00004 domain [Arabidopsis thaliana]
          Length = 1071

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/64 (46%), Positives = 46/64 (71%)
 Frame = +2

Query: 107  TNQSQFNDGKSWTASHDDCPSRRTTLTCVDSEMLTSIWLLCIEKCHSKTLRLLLHSYGKL 286
            ++ S+  +  +  ASHDD  +   TLTC +SE L  IW+ C+++CHSKTL+ LL+++GKL
Sbjct: 844  SSSSEVLESDTSMASHDDTTASTMTLTCRNSEKLNDIWIKCVDRCHSKTLKQLLYAHGKL 903

Query: 287  VSIS 298
            +SIS
Sbjct: 904  LSIS 907


>ref|NP_172898.2| AAA-type ATPase family protein [Arabidopsis thaliana]
            gi|332191046|gb|AEE29167.1| AAA-type ATPase family
            protein [Arabidopsis thaliana]
          Length = 1116

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/64 (46%), Positives = 46/64 (71%)
 Frame = +2

Query: 107  TNQSQFNDGKSWTASHDDCPSRRTTLTCVDSEMLTSIWLLCIEKCHSKTLRLLLHSYGKL 286
            ++ S+  +  +  ASHDD  +   TLTC +SE L  IW+ C+++CHSKTL+ LL+++GKL
Sbjct: 837  SSSSEVLESDTSMASHDDTTASTMTLTCRNSEKLNDIWIKCVDRCHSKTLKQLLYAHGKL 896

Query: 287  VSIS 298
            +SIS
Sbjct: 897  LSIS 900


>ref|XP_002892809.1| hypothetical protein ARALYDRAFT_888824 [Arabidopsis lyrata subsp.
            lyrata] gi|297338651|gb|EFH69068.1| hypothetical protein
            ARALYDRAFT_888824 [Arabidopsis lyrata subsp. lyrata]
          Length = 1130

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/88 (40%), Positives = 55/88 (62%)
 Frame = +2

Query: 35   SASPISFIFADHCNSTSKLGPTQHTNQSQFNDGKSWTASHDDCPSRRTTLTCVDSEMLTS 214
            SASP S   + +     KL     ++  +  + ++  ASHDD  +   TLTC +SE L  
Sbjct: 831  SASPTSMRKSGNLVHEVKLS----SSSREVLESETSIASHDDTTTSSMTLTCRNSEKLND 886

Query: 215  IWLLCIEKCHSKTLRLLLHSYGKLVSIS 298
            IW+ C+++CHSKTL+ LL+++GKL+SIS
Sbjct: 887  IWIKCVDRCHSKTLKQLLYAHGKLLSIS 914


>emb|CBI29623.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/89 (42%), Positives = 51/89 (57%)
 Frame = +2

Query: 32  KSASPISFIFADHCNSTSKLGPTQHTNQSQFNDGKSWTASHDDCPSRRTTLTCVDSEMLT 211
           KS SPIS   +   NST +       +  QF +  +  +SHDD          ++++ L 
Sbjct: 717 KSFSPISMPKSAEKNSTHQ------GDLFQFRNSGASASSHDDVMMGNLVFRSINADKLD 770

Query: 212 SIWLLCIEKCHSKTLRLLLHSYGKLVSIS 298
            IW  CIE+CHSKTLR LLH++GKLVSIS
Sbjct: 771 DIWERCIERCHSKTLRQLLHAHGKLVSIS 799


>ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242129 [Vitis vinifera]
          Length = 1274

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
 Frame = +2

Query: 32   KSASPISFIFADHCNSTSK---LGPTQHTN------QSQFNDGKSWTASHDDCPSRRTTL 184
            KS SPIS   +   NST +   L      N       SQF +  +  +SHDD        
Sbjct: 843  KSFSPISMPKSAEKNSTHQGDLLSLVDGFNFNAKPVHSQFRNSGASASSHDDVMMGNLVF 902

Query: 185  TCVDSEMLTSIWLLCIEKCHSKTLRLLLHSYGKLVSIS 298
              ++++ L  IW  CIE+CHSKTLR LLH++GKLVSIS
Sbjct: 903  RSINADKLDDIWERCIERCHSKTLRQLLHAHGKLVSIS 940


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