BLASTX nr result

ID: Salvia21_contig00020988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00020988
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267813.1| PREDICTED: 50S ribosomal protein L35, chloro...   130   2e-28
ref|XP_002264584.1| PREDICTED: 50S ribosomal protein L35, chloro...   126   4e-27
sp|P23326.1|RK35_SPIOL RecName: Full=50S ribosomal protein L35, ...   122   6e-26
ref|XP_003610263.1| 50S ribosomal protein L35 [Medicago truncatu...   115   1e-23
ref|XP_004146668.1| PREDICTED: 50S ribosomal protein L35, chloro...   113   4e-23

>ref|XP_002267813.1| PREDICTED: 50S ribosomal protein L35, chloroplastic [Vitis
           vinifera] gi|147785813|emb|CAN77631.1| hypothetical
           protein VITISV_001803 [Vitis vinifera]
           gi|147799145|emb|CAN63703.1| hypothetical protein
           VITISV_039205 [Vitis vinifera]
          Length = 153

 Score =  130 bits (328), Expect = 2e-28
 Identities = 78/152 (51%), Positives = 97/152 (63%), Gaps = 3/152 (1%)
 Frame = -2

Query: 657 MATGTMAAIFSFRL-TTLAPHSAIR--SATIPSTPLIKKRASSLNLTSSRSICGLRPLVL 487
           MA+ T+   FS RL ++ +  S++R  +  +  +P    RA SL L+SSR+I G  P++ 
Sbjct: 1   MASATLMLSFSLRLPSSFSSPSSVRVPNEVVQFSPF--SRACSLKLSSSRNISGFAPILP 58

Query: 486 TQTLNTSSPSRGNPQPLTVVCAKGYKMKTHKASAKRFRVTGSGKIMRRRAGKQHXXXXXX 307
            +    +SPS   P  LTVV AKGYKMKTHKASAKRFRVTG GKI+RRRAGKQH      
Sbjct: 59  LRHSTLNSPSPSQPSSLTVVSAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLAKKN 118

Query: 306 XXXXXXXXKSIQVDRSDYNNVLGALPYLKVNR 211
                   K   V RSDY+NV+GALPYLKVNR
Sbjct: 119 AKRRLRLSKMHPVSRSDYDNVIGALPYLKVNR 150


>ref|XP_002264584.1| PREDICTED: 50S ribosomal protein L35, chloroplastic [Vitis
           vinifera]
          Length = 153

 Score =  126 bits (317), Expect = 4e-27
 Identities = 76/152 (50%), Positives = 95/152 (62%), Gaps = 3/152 (1%)
 Frame = -2

Query: 657 MATGTMAAIFSFRL-TTLAPHSAIR--SATIPSTPLIKKRASSLNLTSSRSICGLRPLVL 487
           M + T+   F  RL ++ +  S++R  +  +  +P    RA SL L+SSR+I G  P++ 
Sbjct: 1   MDSATLMLSFPLRLPSSFSSPSSVRVPNEVVQFSPF--SRACSLKLSSSRNISGFAPILP 58

Query: 486 TQTLNTSSPSRGNPQPLTVVCAKGYKMKTHKASAKRFRVTGSGKIMRRRAGKQHXXXXXX 307
            +    +SPS   P  LTVV AKGYKMKTHKASAKRFRVTG GKI+RRRAGKQH      
Sbjct: 59  LRHSTLNSPSPSQPSSLTVVSAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLAKKN 118

Query: 306 XXXXXXXXKSIQVDRSDYNNVLGALPYLKVNR 211
                   K   V RSDY+NV+GALPYLKVNR
Sbjct: 119 AKRRLRLSKMHPVSRSDYDNVIGALPYLKVNR 150


>sp|P23326.1|RK35_SPIOL RecName: Full=50S ribosomal protein L35, chloroplastic; AltName:
           Full=CL35; Flags: Precursor gi|189096153|pdb|3BBO|5
           Chain 5, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|170139|gb|AAA34043.1| ribosomal
           protein L35 [Spinacia oleracea]
          Length = 159

 Score =  122 bits (307), Expect = 6e-26
 Identities = 82/161 (50%), Positives = 97/161 (60%), Gaps = 12/161 (7%)
 Frame = -2

Query: 657 MATGTMAAIFSFRLTTLAPHSAIRSAT--IPSTPLIKKRASSLNLTSSRSICG--LRPLV 490
           MA+ T    F     +L+P S   SA   I  T   K+  S+LNL+SS SI    ++P+V
Sbjct: 3   MASATATLSFKTPSLSLSPPSTRCSAAQGISLTHFNKQLKSTLNLSSSSSISSSKVQPIV 62

Query: 489 LTQ--------TLNTSSPSRGNPQPLTVVCAKGYKMKTHKASAKRFRVTGSGKIMRRRAG 334
           L          +++TSSPS       TV  AKGYKMKTHKASAKRFRVTG GKI+RRRAG
Sbjct: 63  LKNKRISTVDSSVSTSSPS------FTVFAAKGYKMKTHKASAKRFRVTGKGKIVRRRAG 116

Query: 333 KQHXXXXXXXXXXXXXXKSIQVDRSDYNNVLGALPYLKVNR 211
           KQH              K IQVDRSDY+NV+GALPYLKVNR
Sbjct: 117 KQHLLAKKNTKRKNRLSKLIQVDRSDYDNVIGALPYLKVNR 157


>ref|XP_003610263.1| 50S ribosomal protein L35 [Medicago truncatula]
           gi|217071304|gb|ACJ84012.1| unknown [Medicago
           truncatula] gi|355511318|gb|AES92460.1| 50S ribosomal
           protein L35 [Medicago truncatula]
           gi|388495356|gb|AFK35744.1| unknown [Medicago
           truncatula]
          Length = 148

 Score =  115 bits (288), Expect = 1e-23
 Identities = 69/148 (46%), Positives = 92/148 (62%)
 Frame = -2

Query: 654 ATGTMAAIFSFRLTTLAPHSAIRSATIPSTPLIKKRASSLNLTSSRSICGLRPLVLTQTL 475
           AT T+++  + RL+  +  + +  +++ S        +SL L  S   C +   +L Q  
Sbjct: 6   ATATVSSFAALRLSPPSTSTRVSFSSVKSP--FSNNVNSLKLNWS---CSISAPILNQNH 60

Query: 474 NTSSPSRGNPQPLTVVCAKGYKMKTHKASAKRFRVTGSGKIMRRRAGKQHXXXXXXXXXX 295
           +  + S   P+ LT+V AKGYKMKTHKASAKRFRVTG+GKI+RRRAGKQH          
Sbjct: 61  SIVTTS---PRSLTIVSAKGYKMKTHKASAKRFRVTGAGKIVRRRAGKQHLLYKKNKKRK 117

Query: 294 XXXXKSIQVDRSDYNNVLGALPYLKVNR 211
               K IQV+RSDY+NV+GALPYLKVNR
Sbjct: 118 LRLSKMIQVNRSDYDNVIGALPYLKVNR 145


>ref|XP_004146668.1| PREDICTED: 50S ribosomal protein L35, chloroplastic-like [Cucumis
           sativus] gi|449503151|ref|XP_004161859.1| PREDICTED: 50S
           ribosomal protein L35, chloroplastic-like [Cucumis
           sativus]
          Length = 151

 Score =  113 bits (283), Expect = 4e-23
 Identities = 71/149 (47%), Positives = 85/149 (57%)
 Frame = -2

Query: 657 MATGTMAAIFSFRLTTLAPHSAIRSATIPSTPLIKKRASSLNLTSSRSICGLRPLVLTQT 478
           MA+ +MA  F  R + L    + R +          + +SL L+SS +I G     L Q 
Sbjct: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGIASVNKVNSLKLSSSHNISGFGFNSL-QK 59

Query: 477 LNTSSPSRGNPQPLTVVCAKGYKMKTHKASAKRFRVTGSGKIMRRRAGKQHXXXXXXXXX 298
            +  SP+     P TV  AKGYKMKTHKASAKRFRVTG GKI+RRRAGKQH         
Sbjct: 60  PSHISPTSQIRTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLCKKNAKR 119

Query: 297 XXXXXKSIQVDRSDYNNVLGALPYLKVNR 211
                K   V RSDY+NV+GALPYLKVNR
Sbjct: 120 RLRLSKMHPVSRSDYDNVIGALPYLKVNR 148


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