BLASTX nr result

ID: Salvia21_contig00020148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00020148
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|2...   238   2e-60
ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|2...   238   2e-60
ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3...   235   1e-59
ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3...   235   1e-59
ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3...   234   2e-59

>ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|222848999|gb|EEE86546.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  238 bits (606), Expect = 2e-60
 Identities = 130/201 (64%), Positives = 151/201 (75%), Gaps = 13/201 (6%)
 Frame = +3

Query: 9   LGNLGPLMICHKVSSSIALLDPFTLKQCFLDAKQYGXXXXXXXXXXXXXTEYIVLDVEPV 188
           LGNLGPL+IC KV++SIALLDPFTL+ CFLDA QY               EYIV DV+ V
Sbjct: 268 LGNLGPLVICSKVTNSIALLDPFTLRHCFLDADQYWRTPFKSLLTSRQLVEYIVFDVDFV 327

Query: 189 SSE---GGSRWYALADAHVARVSDFGKNDRCFIVRTHLGNRLSPGDYALGYDLYGANVND 359
           S E   GGSR YALADA VAR+SDFGKND  F ++THLG+ L PGDYALGYDL+GAN ND
Sbjct: 328 SPEVNIGGSR-YALADATVARMSDFGKNDTMFNIKTHLGHILKPGDYALGYDLHGANSND 386

Query: 360 IELERSYKSVDIPDVILIKKSYGEKRS------RSWKLKSLEMEVDD----GAKEKMNSE 509
           +EL++ YK++ IP+ IL+KKSY EKR       RSWKLKSL MEVDD    G +EKMNSE
Sbjct: 387 MELDK-YKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKSLNMEVDDTRARGDQEKMNSE 445

Query: 510 YEHFLRDIEENPDLRFNLSLY 572
           YE FLRD+EENP+LRFN+SLY
Sbjct: 446 YEQFLRDLEENPELRFNVSLY 466


>ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|222848846|gb|EEE86393.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  238 bits (606), Expect = 2e-60
 Identities = 130/201 (64%), Positives = 151/201 (75%), Gaps = 13/201 (6%)
 Frame = +3

Query: 9   LGNLGPLMICHKVSSSIALLDPFTLKQCFLDAKQYGXXXXXXXXXXXXXTEYIVLDVEPV 188
           LGNLGPL+IC KV++SIALLDPFTL+ CFLDA QY               EYIV DV+ V
Sbjct: 268 LGNLGPLVICSKVTNSIALLDPFTLRHCFLDADQYWRTPFKSLLTSRQLVEYIVFDVDFV 327

Query: 189 SSE---GGSRWYALADAHVARVSDFGKNDRCFIVRTHLGNRLSPGDYALGYDLYGANVND 359
           S E   GGSR YALADA VAR+SDFGKND  F ++THLG+ L PGDYALGYDL+GAN ND
Sbjct: 328 SPEVNIGGSR-YALADATVARMSDFGKNDTMFNIKTHLGHILKPGDYALGYDLHGANSND 386

Query: 360 IELERSYKSVDIPDVILIKKSYGEKRS------RSWKLKSLEMEVDD----GAKEKMNSE 509
           +EL++ YK++ IP+ IL+KKSY EKR       RSWKLKSL MEVDD    G +EKMNSE
Sbjct: 387 MELDK-YKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKSLNMEVDDTRARGDQEKMNSE 445

Query: 510 YEHFLRDIEENPDLRFNLSLY 572
           YE FLRD+EENP+LRFN+SLY
Sbjct: 446 YEQFLRDLEENPELRFNVSLY 466


>ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
          Length = 505

 Score =  235 bits (599), Expect = 1e-59
 Identities = 126/200 (63%), Positives = 149/200 (74%), Gaps = 12/200 (6%)
 Frame = +3

Query: 9   LGNLGPLMICHKVSSSIALLDPFTLKQCFLDAKQYGXXXXXXXXXXXXXTEYIVLDVEPV 188
           LGNLGPL+IC KV+++IALLDPFTL+ CFLDA QY               EY+VLD+E V
Sbjct: 267 LGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSRQLVEYVVLDIENV 326

Query: 189 SSE---GGSRWYALADAHVARVSDFGKNDRCFIVRTHLGNRLSPGDYALGYDLYGANVND 359
           S+E    GS+ Y LA A VARVSDFG+ND  F ++THLG+ L+PGDYALGYDLYGAN ND
Sbjct: 327 STEVNVAGSK-YMLAYAQVARVSDFGRNDTMFSIKTHLGHILNPGDYALGYDLYGANSND 385

Query: 360 IELERSYKSVDIPDVILIKKSYGEKRS------RSWKLKSLEMEVDDGAK---EKMNSEY 512
           +ELE+ YK +++P+ ILIKKSY EKR       RSWKLKSL M+VDD  K    KMNSEY
Sbjct: 386 MELEK-YKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLSMDVDDKTKVDENKMNSEY 444

Query: 513 EHFLRDIEENPDLRFNLSLY 572
           E FLRD+EENPDLRFN+SLY
Sbjct: 445 EQFLRDLEENPDLRFNISLY 464


>ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
          Length = 505

 Score =  235 bits (599), Expect = 1e-59
 Identities = 126/200 (63%), Positives = 149/200 (74%), Gaps = 12/200 (6%)
 Frame = +3

Query: 9   LGNLGPLMICHKVSSSIALLDPFTLKQCFLDAKQYGXXXXXXXXXXXXXTEYIVLDVEPV 188
           LGNLGPL+IC KV+++IALLDPFTL+ CFLDA QY               EY+VLD+E V
Sbjct: 267 LGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSRQLVEYVVLDIENV 326

Query: 189 SSE---GGSRWYALADAHVARVSDFGKNDRCFIVRTHLGNRLSPGDYALGYDLYGANVND 359
           S+E    GS+ Y LA A VARVSDFG+ND  F ++THLG+ L+PGDYALGYDLYGAN ND
Sbjct: 327 STEVNVAGSK-YMLAYAQVARVSDFGRNDTMFSIKTHLGHILNPGDYALGYDLYGANSND 385

Query: 360 IELERSYKSVDIPDVILIKKSYGEKRS------RSWKLKSLEMEVDDGAK---EKMNSEY 512
           +ELE+ YK +++P+ ILIKKSY EKR       RSWKLKSL M+VDD  K    KMNSEY
Sbjct: 386 MELEK-YKGLELPEAILIKKSYEEKRQRKHGKPRSWKLKSLSMDVDDKTKVDENKMNSEY 444

Query: 513 EHFLRDIEENPDLRFNLSLY 572
           E FLRD+EENPDLRFN+SLY
Sbjct: 445 EQFLRDLEENPDLRFNISLY 464


>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
          Length = 510

 Score =  234 bits (597), Expect = 2e-59
 Identities = 129/201 (64%), Positives = 150/201 (74%), Gaps = 13/201 (6%)
 Frame = +3

Query: 9   LGNLGPLMICHKVSSSIALLDPFTLKQCFLDAKQYGXXXXXXXXXXXXXTEYIVLDVEPV 188
           LGNLGPL+IC KVS++IALLDPFTL+ CFLDA QY               EYIVLDVE V
Sbjct: 267 LGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRSSFKALLSSRQLVEYIVLDVEIV 326

Query: 189 SSE---GGSRWYALADAHVARVSDFGKNDRCFIVRTHLGNRLSPGDYALGYDLYGANVND 359
           SSE   GGS+ YALADA VARVSDFGKND  F +RTHLG+ L+PGD+ALGYD+Y AN ND
Sbjct: 327 SSEVNVGGSK-YALADAQVARVSDFGKNDTIFNIRTHLGHLLNPGDHALGYDVYAANSND 385

Query: 360 IELERSYKSVDIPDVILIKKSYGEKRS------RSWKLKSLEMEVDDGA----KEKMNSE 509
           +ELE+ Y+   +P+ ILIKKSY EKR       RSWKLKSL MEVDD      +EKMN+E
Sbjct: 386 MELEK-YRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKSLNMEVDDSKGRADQEKMNTE 444

Query: 510 YEHFLRDIEENPDLRFNLSLY 572
           YE FLRD+EE+P+LRFN+SLY
Sbjct: 445 YEVFLRDLEEDPELRFNISLY 465


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