BLASTX nr result

ID: Salvia21_contig00020110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00020110
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314654.1| predicted protein [Populus trichocarpa] gi|2...   247   3e-63
ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypep...   244   1e-62
ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II su...   243   4e-62
gb|ABK95475.1| unknown [Populus trichocarpa]                          243   4e-62
ref|XP_002312568.1| predicted protein [Populus trichocarpa] gi|2...   241   2e-61

>ref|XP_002314654.1| predicted protein [Populus trichocarpa] gi|222863694|gb|EEF00825.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  247 bits (630), Expect = 3e-63
 Identities = 120/181 (66%), Positives = 152/181 (83%)
 Frame = +2

Query: 56  EKVGKMYLKSKLSWNVVIPAERLDAGGLMLQKAIITRLMADFAAKKASKDLGYFLALSTV 235
           EK  KM+LK +L WNV+IPAE LDA GLMLQ++I+  L+ADFA K+A+KDLGY+LA+ST+
Sbjct: 13  EKGKKMFLKVQLPWNVIIPAENLDAKGLMLQRSIVVCLLADFAKKRATKDLGYYLAVSTL 72

Query: 236 GSIGEGKVRKQSGDVIFLVDFSCITFKALPGEILEGVVHKLLKQGVFLRCGPVETIFLAH 415
            SIGEGKVR+ +GDV+F V FS ITFK   GEILEGVVHK+LK GV LRCGP+E I+L+ 
Sbjct: 73  ESIGEGKVRQHTGDVLFPVVFSGITFKIFKGEILEGVVHKVLKHGVLLRCGPIENIYLSS 132

Query: 416 QKMDDYQYMPGENPYFMNAKSSKIEKGVVVRFLVIGSKFIEVEKDFQLIGSLEGDYLGPV 595
            KM DY+Y+PGENP F+N K+SKIEK VVVRF+V+G+K++E E++FQ + SLEGDYLGPV
Sbjct: 133 MKMLDYRYVPGENPVFLNDKTSKIEKDVVVRFVVLGTKWLEAEREFQALVSLEGDYLGPV 192

Query: 596 A 598
           +
Sbjct: 193 S 193


>ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
           [Ricinus communis] gi|223538083|gb|EEF39694.1|
           DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
           putative [Ricinus communis]
          Length = 176

 Score =  244 bits (624), Expect = 1e-62
 Identities = 118/176 (67%), Positives = 149/176 (84%)
 Frame = +2

Query: 71  MYLKSKLSWNVVIPAERLDAGGLMLQKAIITRLMADFAAKKASKDLGYFLALSTVGSIGE 250
           MYLK +L WNV+I AE LDA GLMLQ++II RL+ DFA+KKA+KDLGY+LA++T+ SIGE
Sbjct: 1   MYLKVQLPWNVIISAEHLDAKGLMLQRSIIIRLLEDFASKKATKDLGYYLAVTTLESIGE 60

Query: 251 GKVRKQSGDVIFLVDFSCITFKALPGEILEGVVHKLLKQGVFLRCGPVETIFLAHQKMDD 430
           GKVR+ +GDV+F V F+ ITFK   GEILEGVVHK+LK GVF+RCGP+E I+L+  KM D
Sbjct: 61  GKVREHTGDVLFPVVFNGITFKIFRGEILEGVVHKVLKHGVFIRCGPIENIYLSCMKMPD 120

Query: 431 YQYMPGENPYFMNAKSSKIEKGVVVRFLVIGSKFIEVEKDFQLIGSLEGDYLGPVA 598
           Y Y+PGENP F+N K+SKIEK VVVRF+VIG+K++E E++FQ + SLEGDYLGPV+
Sbjct: 121 YHYVPGENPVFLNDKTSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS 176


>ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449522228|ref|XP_004168129.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
          Length = 175

 Score =  243 bits (620), Expect = 4e-62
 Identities = 121/176 (68%), Positives = 150/176 (85%)
 Frame = +2

Query: 71  MYLKSKLSWNVVIPAERLDAGGLMLQKAIITRLMADFAAKKASKDLGYFLALSTVGSIGE 250
           M+LK +L WNV+IPAE LDA GLMLQ++II RL+ +FA KKA+KDLGYFLA++T+ +IGE
Sbjct: 1   MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGE 60

Query: 251 GKVRKQSGDVIFLVDFSCITFKALPGEILEGVVHKLLKQGVFLRCGPVETIFLAHQKMDD 430
           GKVR Q+GDV+F V FS ITFK   GEILEGVVHK+LK GVFLRCGPVE I+L++ KM D
Sbjct: 61  GKVR-QTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPD 119

Query: 431 YQYMPGENPYFMNAKSSKIEKGVVVRFLVIGSKFIEVEKDFQLIGSLEGDYLGPVA 598
           Y+Y+PGENP F+N K SKIEK VVVRF+VIG+K++E E++FQ + SLEGDYLGPV+
Sbjct: 120 YRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS 175


>gb|ABK95475.1| unknown [Populus trichocarpa]
          Length = 176

 Score =  243 bits (620), Expect = 4e-62
 Identities = 117/176 (66%), Positives = 149/176 (84%)
 Frame = +2

Query: 71  MYLKSKLSWNVVIPAERLDAGGLMLQKAIITRLMADFAAKKASKDLGYFLALSTVGSIGE 250
           M+LK +L WNV+IPAE LDA GLMLQ++I+  L+ADFA K+A+KDLGY+LA+ST+ SIGE
Sbjct: 1   MFLKVQLPWNVIIPAENLDAKGLMLQRSIVVCLLADFAKKRATKDLGYYLAVSTLESIGE 60

Query: 251 GKVRKQSGDVIFLVDFSCITFKALPGEILEGVVHKLLKQGVFLRCGPVETIFLAHQKMDD 430
           GKVR+ +GDV+F V FS ITFK   GEILEGVVHK+LK GV LRCGP+E I+L+  KM D
Sbjct: 61  GKVRQHTGDVLFPVVFSGITFKIFKGEILEGVVHKVLKHGVLLRCGPIENIYLSSMKMLD 120

Query: 431 YQYMPGENPYFMNAKSSKIEKGVVVRFLVIGSKFIEVEKDFQLIGSLEGDYLGPVA 598
           Y+Y+PGENP F+N K+SKIEK VVVRF+V+G+K++E E++FQ + SLEGDYLGPV+
Sbjct: 121 YRYVPGENPVFLNDKTSKIEKDVVVRFVVLGTKWLEAEREFQALVSLEGDYLGPVS 176


>ref|XP_002312568.1| predicted protein [Populus trichocarpa] gi|222852388|gb|EEE89935.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  241 bits (614), Expect = 2e-61
 Identities = 115/176 (65%), Positives = 148/176 (84%)
 Frame = +2

Query: 71  MYLKSKLSWNVVIPAERLDAGGLMLQKAIITRLMADFAAKKASKDLGYFLALSTVGSIGE 250
           M+LK +L WNV+IPAE LDA GLMLQ++I+ RL+ DFA K A+KDLGY+LA+ST+ SIGE
Sbjct: 1   MFLKVQLPWNVIIPAENLDAKGLMLQRSIVVRLLDDFAKKGATKDLGYYLAVSTLESIGE 60

Query: 251 GKVRKQSGDVIFLVDFSCITFKALPGEILEGVVHKLLKQGVFLRCGPVETIFLAHQKMDD 430
           GKVR+ +GDV+F V FS ITFK   GEIL+G+VHK+LK GV LRCGP+E I+L+  KM D
Sbjct: 61  GKVRQHTGDVLFPVVFSGITFKIFRGEILDGIVHKVLKHGVLLRCGPIENIYLSCMKMPD 120

Query: 431 YQYMPGENPYFMNAKSSKIEKGVVVRFLVIGSKFIEVEKDFQLIGSLEGDYLGPVA 598
           Y+Y+PGENP F+N K+SKIEK VVVRF+V+G+K++E E++FQ + SLEGDYLGPV+
Sbjct: 121 YRYVPGENPVFLNDKTSKIEKDVVVRFVVLGTKWLEAEREFQALVSLEGDYLGPVS 176


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