BLASTX nr result
ID: Salvia21_contig00020003
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Salvia21_contig00020003 (369 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_006460178.1| ribosomal protein subunit S4 (mitochondrion)... 194 5e-48 gb|AAW47276.1| ribosomal protein S4 [Platanus occidentalis] 180 9e-44 ref|YP_002608399.1| ribosomal protein S4 [Vitis vinifera] gi|209... 180 1e-43 emb|CBX33388.1| ribosomal protein S4 (mitochondrion) [Malus x do... 178 5e-43 gb|AAW47277.1| ribosomal protein S4 [Eschscholzia californica] 177 1e-42 >ref|YP_006460178.1| ribosomal protein subunit S4 (mitochondrion) [Mimulus guttatus] gi|340007672|gb|AEK26536.1| ribosomal protein subunit S4 (mitochondrion) [Mimulus guttatus] Length = 353 Score = 194 bits (494), Expect = 5e-48 Identities = 97/121 (80%), Positives = 100/121 (82%) Frame = +3 Query: 3 HFKVFHGDIISFQENDVRTRGEEIRRSFYIEILVEKFIGKFLDRPVRMWXXXXXXXXXXX 182 HFKV H DIISFQ+ND RTRGEEIRRSFYIEI VEK IGKFLDRPVRMW Sbjct: 132 HFKVSHSDIISFQQNDARTRGEEIRRSFYIEISVEKCIGKFLDRPVRMWRRNKTEWFRKL 191 Query: 183 XXXXECRLLLKSKFLQQLRSSMQEEDTKKFGSKKVCLGSYFDEHNRMKRNLYHFKSLFLS 362 +CRLLLKS+FLQQLRSSMQEEDTKKFGSKKVCLGSYFDEHNRMKRNLYHFK LFLS Sbjct: 192 KTKKKCRLLLKSQFLQQLRSSMQEEDTKKFGSKKVCLGSYFDEHNRMKRNLYHFKCLFLS 251 Query: 363 K 365 K Sbjct: 252 K 252 >gb|AAW47276.1| ribosomal protein S4 [Platanus occidentalis] Length = 320 Score = 180 bits (457), Expect = 9e-44 Identities = 93/124 (75%), Positives = 97/124 (78%), Gaps = 3/124 (2%) Frame = +3 Query: 3 HFKVFHGDIISFQENDVRTRGEEIRRSFYIEILVEKFIGKFLDRPVRMWXXXXXXXXXXX 182 H KV HGD+ISFQEND RTRGEEIRRSFYI+I VEK IGKFLD PVRMW Sbjct: 126 HLKVSHGDLISFQENDARTRGEEIRRSFYIDISVEKIIGKFLDHPVRMWRRTKTEWFRLL 185 Query: 183 XXXXECRLLLKSKFLQQLRSSMQEED---TKKFGSKKVCLGSYFDEHNRMKRNLYHFKSL 353 CRLLLKS+FLQQLRSSMQEED TKKFGS+KVCLGS F EHNRMKRNLYHFKSL Sbjct: 186 KTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSL 245 Query: 354 FLSK 365 FLSK Sbjct: 246 FLSK 249 >ref|YP_002608399.1| ribosomal protein S4 [Vitis vinifera] gi|209954196|emb|CAQ77661.1| ribosomal protein S4 [Vitis vinifera] gi|239764730|gb|ACS15201.1| ribosomal protein S4 [Vitis vinifera] Length = 362 Score = 180 bits (456), Expect = 1e-43 Identities = 94/124 (75%), Positives = 96/124 (77%), Gaps = 3/124 (2%) Frame = +3 Query: 3 HFKVFHGDIISFQENDVRTRGEEIRRSFYIEILVEKFIGKFLDRPVRMWXXXXXXXXXXX 182 H KV HGDIISFQEND R RGEEIRRSFYIEI VEK IGKFLD PVRMW Sbjct: 143 HLKVSHGDIISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLL 202 Query: 183 XXXXECRLLLKSKFLQQLRSSMQEED---TKKFGSKKVCLGSYFDEHNRMKRNLYHFKSL 353 CRLLLKS+FLQQLRSSMQEED TKKFGS+KVCLGS F EHNRMKRNLYHFKSL Sbjct: 203 KTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSL 262 Query: 354 FLSK 365 FLSK Sbjct: 263 FLSK 266 >emb|CBX33388.1| ribosomal protein S4 (mitochondrion) [Malus x domestica] Length = 359 Score = 178 bits (451), Expect = 5e-43 Identities = 92/123 (74%), Positives = 96/123 (78%), Gaps = 3/123 (2%) Frame = +3 Query: 3 HFKVFHGDIISFQENDVRTRGEEIRRSFYIEILVEKFIGKFLDRPVRMWXXXXXXXXXXX 182 HFKV HGD+ISFQEND R RGEEIRRSFYIEI VEK IGKFLD PVRMW Sbjct: 140 HFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKAEWFHLL 199 Query: 183 XXXXECRLLLKSKFLQQLRSSMQEED---TKKFGSKKVCLGSYFDEHNRMKRNLYHFKSL 353 CRLLLKS+FL+QLRSSMQEED TKKFGS+KVCLGS F EHNRMKRNLYHFKSL Sbjct: 200 KTHRGCRLLLKSRFLRQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSL 259 Query: 354 FLS 362 FLS Sbjct: 260 FLS 262 >gb|AAW47277.1| ribosomal protein S4 [Eschscholzia californica] Length = 319 Score = 177 bits (448), Expect = 1e-42 Identities = 91/124 (73%), Positives = 97/124 (78%), Gaps = 3/124 (2%) Frame = +3 Query: 3 HFKVFHGDIISFQENDVRTRGEEIRRSFYIEILVEKFIGKFLDRPVRMWXXXXXXXXXXX 182 H+KV +GD+ISFQEND RTRGEEIRRSFYI+I VEK IGKFL PVRMW Sbjct: 126 HWKVCYGDLISFQENDARTRGEEIRRSFYIDISVEKIIGKFLAHPVRMWRRTKTEWFRLL 185 Query: 183 XXXXECRLLLKSKFLQQLRSSMQEED---TKKFGSKKVCLGSYFDEHNRMKRNLYHFKSL 353 CR LLKS+FLQQLRSSMQEED TKKFGS+KVCLGSYF EHNRMKRNLYHFKSL Sbjct: 186 KTKRGCRXLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSYFAEHNRMKRNLYHFKSL 245 Query: 354 FLSK 365 FLSK Sbjct: 246 FLSK 249