BLASTX nr result

ID: Salvia21_contig00019920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00019920
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302948.1| high mobility group family [Populus trichoca...    69   2e-18
dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...    66   6e-18
ref|XP_002531913.1| Histone H1, putative [Ricinus communis] gi|2...    64   3e-16
ref|XP_002305213.1| high mobility group family [Populus trichoca...    62   4e-15
emb|CAA61747.1| HMGI/Y [Pisum sativum] gi|1435175|emb|CAA67752.1...    62   8e-15

>ref|XP_002302948.1| high mobility group family [Populus trichocarpa]
           gi|222844674|gb|EEE82221.1| high mobility group family
           [Populus trichocarpa]
          Length = 190

 Score = 68.9 bits (167), Expect(2) = 2e-18
 Identities = 30/46 (65%), Positives = 39/46 (84%)
 Frame = -2

Query: 949 KPSSLPPYPQMIMEAIDAVKEADGANKSTISKYMESKYGELGGTHT 812
           KP SLPPYP+MI+ AI+A+ EA+G NK++ISKY+ESKYG+L   HT
Sbjct: 8   KPPSLPPYPEMILSAIEALNEANGCNKTSISKYIESKYGDLPAGHT 53



 Score = 50.4 bits (119), Expect(2) = 2e-18
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -1

Query: 746 ELGGTHTDLLNHHLTAMKDSGELVFVKNNYLRPSSDA 636
           +L   HT LL+HHL  MKD+GELVF KNNY++P  +A
Sbjct: 47  DLPAGHTALLSHHLNRMKDTGELVFWKNNYMKPDPNA 83


>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score = 66.2 bits (160), Expect(2) = 6e-18
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = -2

Query: 949 KPSSLPPYPQMIMEAIDAVKEADGANKSTISKYMESKYGELGGTH 815
           KP SLPPYP+M+M+A+DA+ E  G+NKS ISKY+ES YGEL   H
Sbjct: 8   KPPSLPPYPEMVMKALDALNEPSGSNKSAISKYIESTYGELPDGH 52



 Score = 51.2 bits (121), Expect(2) = 6e-18
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = -1

Query: 746 ELGGTHTDLLNHHLTAMKDSGELVFVKNNYLRPSSDA 636
           EL   H  LL HHL  MKDSGELVF+KNNY++P  +A
Sbjct: 47  ELPDGHATLLAHHLNKMKDSGELVFLKNNYMKPDPNA 83


>ref|XP_002531913.1| Histone H1, putative [Ricinus communis] gi|223528423|gb|EEF30457.1|
           Histone H1, putative [Ricinus communis]
          Length = 166

 Score = 63.9 bits (154), Expect(2) = 3e-16
 Identities = 28/46 (60%), Positives = 38/46 (82%)
 Frame = -2

Query: 949 KPSSLPPYPQMIMEAIDAVKEADGANKSTISKYMESKYGELGGTHT 812
           KP +LPPYPQMI+ AI A+ + +G+NK++ISKY+ESKYG+L   HT
Sbjct: 9   KPPTLPPYPQMILAAIAALDDKNGSNKTSISKYIESKYGDLPAGHT 54



 Score = 48.1 bits (113), Expect(2) = 3e-16
 Identities = 22/37 (59%), Positives = 26/37 (70%)
 Frame = -1

Query: 746 ELGGTHTDLLNHHLTAMKDSGELVFVKNNYLRPSSDA 636
           +L   HT LL HHL  MKD+GELVF KNNY+ P  +A
Sbjct: 48  DLPAGHTALLTHHLARMKDTGELVFWKNNYMIPDPNA 84


>ref|XP_002305213.1| high mobility group family [Populus trichocarpa]
           gi|222848177|gb|EEE85724.1| high mobility group family
           [Populus trichocarpa]
          Length = 189

 Score = 61.6 bits (148), Expect(2) = 4e-15
 Identities = 28/46 (60%), Positives = 35/46 (76%)
 Frame = -2

Query: 949 KPSSLPPYPQMIMEAIDAVKEADGANKSTISKYMESKYGELGGTHT 812
           KP SLPPYP+MI  AI A+ E  G+NK++ISKY+ESK+G L   HT
Sbjct: 8   KPPSLPPYPEMIWSAIAALNETGGSNKTSISKYIESKHGNLPAGHT 53



 Score = 46.6 bits (109), Expect(2) = 4e-15
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = -1

Query: 731 HTDLLNHHLTAMKDSGELVFVKNNYLRPSSDA 636
           HT LL HHL  M D+GEL+F+KNNY++P  +A
Sbjct: 52  HTALLAHHLNRMTDTGELMFLKNNYMKPDPNA 83


>emb|CAA61747.1| HMGI/Y [Pisum sativum] gi|1435175|emb|CAA67752.1| HMG-I/Y [Pisum
           sativum]
          Length = 197

 Score = 61.6 bits (148), Expect(2) = 8e-15
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = -2

Query: 949 KPSSLPPYPQMIMEAIDAVKEADGANKSTISKYMESKYGELGGTHT 812
           KP SLPPYP++I++AID++ E +G+NKS IS Y+ES YGEL   H+
Sbjct: 8   KPLSLPPYPELILKAIDSLNEPNGSNKSAISNYIESVYGELPEGHS 53



 Score = 45.4 bits (106), Expect(2) = 8e-15
 Identities = 21/37 (56%), Positives = 27/37 (72%)
 Frame = -1

Query: 746 ELGGTHTDLLNHHLTAMKDSGELVFVKNNYLRPSSDA 636
           EL   H+ +L +HL  MK+SG+LVF KNNYLRP  +A
Sbjct: 47  ELPEGHSVVLLYHLNQMKESGDLVFAKNNYLRPDPNA 83


Top