BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00019879
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007507103.1| RNA polymerase beta subunit (chloroplast) [S...   468   e-130
gb|ADD31205.1| RNA polymerase beta subunit protein [Liquidambar ...   460   e-127
gb|ADD31200.1| RNA polymerase beta subunit protein [Cornus florida]   459   e-127
ref|YP_086958.1| RNA polymerase beta subunit [Panax ginseng] gi|...   459   e-127
ref|YP_005090170.1| rpoB gene product (chloroplast) [Ricinus com...   459   e-127

>ref|YP_007507103.1| RNA polymerase beta subunit (chloroplast) [Salvia miltiorrhiza]
            gi|401879734|gb|AFQ30921.1| RNA polymerase beta subunit
            (chloroplast) [Salvia miltiorrhiza]
          Length = 1070

 Score =  468 bits (1203), Expect = e-130
 Identities = 230/231 (99%), Positives = 230/231 (99%)
 Frame = -1

Query: 693  LGSWVETGDILVGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVID 514
            LGSWVETGDILVGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVID
Sbjct: 728  LGSWVETGDILVGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVID 787

Query: 513  VRWIQKRGGSSYNPEMIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGKP 334
            VRWIQKRGGSSYNPEMIRVYI QKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGKP
Sbjct: 788  VRWIQKRGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGKP 847

Query: 333  VDMVFNPLGVPSRMNVGQIFECSLGLAGGFLDRHYRIAPFDERYEQEASRKLVFSELYEA 154
            VDMVFNPLGVPSRMNVGQIFECSLGLAGGFLDRHYRIAPFDERYEQEASRKLVFSELYEA
Sbjct: 848  VDMVFNPLGVPSRMNVGQIFECSLGLAGGFLDRHYRIAPFDERYEQEASRKLVFSELYEA 907

Query: 153  SKQTANPWVFEPEYPGKSRIFDGRTGSPFEQPVIIGKPYILKLIHQVDDKI 1
            SKQTANPWVFEPEYPGKSRIFDGRTGSPFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 908  SKQTANPWVFEPEYPGKSRIFDGRTGSPFEQPVIIGKPYILKLIHQVDDKI 958


>gb|ADD31205.1| RNA polymerase beta subunit protein [Liquidambar styraciflua]
          Length = 1070

 Score =  460 bits (1183), Expect = e-127
 Identities = 225/231 (97%), Positives = 227/231 (98%)
 Frame = -1

Query: 693  LGSWVETGDILVGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVID 514
            LGSWVETGDILVGKLTPQM KESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVID
Sbjct: 728  LGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVID 787

Query: 513  VRWIQKRGGSSYNPEMIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGKP 334
            VRWIQKRGGSSYNPEMIRVYI QKREIKVGDKVAGRHGNKGIISKILPRQDMPY+QDG+P
Sbjct: 788  VRWIQKRGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYVQDGRP 847

Query: 333  VDMVFNPLGVPSRMNVGQIFECSLGLAGGFLDRHYRIAPFDERYEQEASRKLVFSELYEA 154
            VDMVFNPLGVPSRMNVGQIFECSLGLAGG LDRHYRIAPFDERYEQEASRKLVFSELYEA
Sbjct: 848  VDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEA 907

Query: 153  SKQTANPWVFEPEYPGKSRIFDGRTGSPFEQPVIIGKPYILKLIHQVDDKI 1
            SKQTANPWVFEPEYPGKSRIFDGRTG PFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 908  SKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKI 958


>gb|ADD31200.1| RNA polymerase beta subunit protein [Cornus florida]
          Length = 1070

 Score =  459 bits (1182), Expect = e-127
 Identities = 225/231 (97%), Positives = 227/231 (98%)
 Frame = -1

Query: 693  LGSWVETGDILVGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVID 514
            LGSWVETGDILVGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVID
Sbjct: 728  LGSWVETGDILVGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVID 787

Query: 513  VRWIQKRGGSSYNPEMIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGKP 334
            VRWIQKRGGSSYNPE IRVYI QKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDG+P
Sbjct: 788  VRWIQKRGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRP 847

Query: 333  VDMVFNPLGVPSRMNVGQIFECSLGLAGGFLDRHYRIAPFDERYEQEASRKLVFSELYEA 154
            VDMVFNPLGVPSRMNVGQIFECSLGLAGG LDRHYRIAPFDERYEQEASRKLVFSELYEA
Sbjct: 848  VDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEA 907

Query: 153  SKQTANPWVFEPEYPGKSRIFDGRTGSPFEQPVIIGKPYILKLIHQVDDKI 1
            SKQTANPWVFEPEYPGKSRIFDGRTG PFEQPV+IGKPYILKLIHQVDDKI
Sbjct: 908  SKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKPYILKLIHQVDDKI 958


>ref|YP_086958.1| RNA polymerase beta subunit [Panax ginseng]
            gi|68053101|sp|Q68S14.1|RPOB_PANGI RecName:
            Full=DNA-directed RNA polymerase subunit beta; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta; Short=RNA polymerase subunit beta
            gi|51235305|gb|AAT98501.1| RNA polymerase beta subunit
            [Panax ginseng]
          Length = 1071

 Score =  459 bits (1181), Expect = e-127
 Identities = 225/231 (97%), Positives = 226/231 (97%)
 Frame = -1

Query: 693  LGSWVETGDILVGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVID 514
            LGSWVETGDILVGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVID
Sbjct: 729  LGSWVETGDILVGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVID 788

Query: 513  VRWIQKRGGSSYNPEMIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGKP 334
            VRWIQKRGGSSYNPEMIRVYI QKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDG+P
Sbjct: 789  VRWIQKRGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRP 848

Query: 333  VDMVFNPLGVPSRMNVGQIFECSLGLAGGFLDRHYRIAPFDERYEQEASRKLVFSELYEA 154
            VDMVFNPLGVP RMNVGQIFECSLGLAGG LDRHYRIAPFDERYEQEASRKLVFSELYEA
Sbjct: 849  VDMVFNPLGVPPRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEA 908

Query: 153  SKQTANPWVFEPEYPGKSRIFDGRTGSPFEQPVIIGKPYILKLIHQVDDKI 1
             KQTANPWVFEPEYPGKSRIFDGRTG PFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 909  GKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKI 959


>ref|YP_005090170.1| rpoB gene product (chloroplast) [Ricinus communis]
            gi|339516157|gb|AEJ82547.1| RNA polymerase beta subunit
            [Ricinus communis]
          Length = 1070

 Score =  459 bits (1181), Expect = e-127
 Identities = 223/231 (96%), Positives = 227/231 (98%)
 Frame = -1

Query: 693  LGSWVETGDILVGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVID 514
            LGSWVETGDILVGKLTPQM KESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVID
Sbjct: 728  LGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVID 787

Query: 513  VRWIQKRGGSSYNPEMIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGKP 334
            VRW+QK+GGSSYNPE IR+YILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDG+P
Sbjct: 788  VRWVQKKGGSSYNPETIRIYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRP 847

Query: 333  VDMVFNPLGVPSRMNVGQIFECSLGLAGGFLDRHYRIAPFDERYEQEASRKLVFSELYEA 154
            VDMVFNPLGVPSRMNVGQIFECSLGLAGG LDRHYRIAPFDERYEQEASRKLVFSELYEA
Sbjct: 848  VDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEA 907

Query: 153  SKQTANPWVFEPEYPGKSRIFDGRTGSPFEQPVIIGKPYILKLIHQVDDKI 1
            SKQTANPWVFEPEYPGKSRIFDGRTG PFEQPVIIGKPYILKLIHQVDDKI
Sbjct: 908  SKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKI 958