BLASTX nr result

ID: Salvia21_contig00019749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00019749
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149640.1| PREDICTED: mediator of RNA polymerase II tra...   168   1e-39
ref|XP_004168404.1| PREDICTED: mediator of RNA polymerase II tra...   166   6e-39
gb|AAO22731.1| unknown protein [Arabidopsis thaliana]                 163   4e-38
ref|XP_002519303.1| conserved hypothetical protein [Ricinus comm...   163   4e-38
emb|CAB80843.1| hypothetical protein [Arabidopsis thaliana]           163   4e-38

>ref|XP_004149640.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           21-like [Cucumis sativus]
          Length = 138

 Score =  168 bits (426), Expect = 1e-39
 Identities = 91/138 (65%), Positives = 100/138 (72%)
 Frame = +3

Query: 225 MDIISQLQEQVNTVASLAFNTFGTLQRDAPPVQLSXXXXXXXXXXXXXXXXXLAEQPKLL 404
           MDIISQLQEQVNT+A+LAFNTFGTLQRDAPPV+LS                 +AEQPKL+
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPTEDNATIAEQPKLM 60

Query: 405 SSELVKAAKQFDXXXXXXXXXXXXXXXQLQRIVELQAENDVIGQELQKQLEAAEKELRQV 584
           S+ LVKAAKQFD               QL+RI ELQAENDV+GQELQKQL+AAEKEL QV
Sbjct: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDVVGQELQKQLQAAEKELVQV 120

Query: 585 QELFGQAADNCLNLKKPD 638
           QELF Q ADNCLNLKK D
Sbjct: 121 QELFSQVADNCLNLKKAD 138


>ref|XP_004168404.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           21-like [Cucumis sativus]
          Length = 138

 Score =  166 bits (420), Expect = 6e-39
 Identities = 90/138 (65%), Positives = 99/138 (71%)
 Frame = +3

Query: 225 MDIISQLQEQVNTVASLAFNTFGTLQRDAPPVQLSXXXXXXXXXXXXXXXXXLAEQPKLL 404
           MDIISQLQEQVNT+A+LAFNTFGTLQRDAPPV+LS                 +AEQPKL+
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPTEDNATIAEQPKLM 60

Query: 405 SSELVKAAKQFDXXXXXXXXXXXXXXXQLQRIVELQAENDVIGQELQKQLEAAEKELRQV 584
           S+ LVKAAKQFD               QL+RI ELQAENDV+GQELQKQL+AAEKEL QV
Sbjct: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDVVGQELQKQLQAAEKELVQV 120

Query: 585 QELFGQAADNCLNLKKPD 638
           QELF Q ADNCLNL K D
Sbjct: 121 QELFSQVADNCLNLMKAD 138


>gb|AAO22731.1| unknown protein [Arabidopsis thaliana]
          Length = 162

 Score =  163 bits (413), Expect = 4e-38
 Identities = 89/140 (63%), Positives = 99/140 (70%), Gaps = 1/140 (0%)
 Frame = +3

Query: 222 KMDIISQLQEQVNTVASLAFNTFGTLQRDAPPVQLSXXXXXXXXXXXXXXXXX-LAEQPK 398
           KMDIISQLQEQVNT+A++ FN FGTLQRDAPPVQLS                    EQPK
Sbjct: 23  KMDIISQLQEQVNTIAAITFNAFGTLQRDAPPVQLSPNYPEPPATTTVTDDATPFPEQPK 82

Query: 399 LLSSELVKAAKQFDXXXXXXXXXXXXXXXQLQRIVELQAENDVIGQELQKQLEAAEKELR 578
            LS+ LVKAAKQFD               QL+RI ELQ END++GQELQKQLEAAEKEL+
Sbjct: 83  QLSAGLVKAAKQFDALVAALPLSEGGEGAQLKRIAELQVENDLVGQELQKQLEAAEKELK 142

Query: 579 QVQELFGQAADNCLNLKKPD 638
           QVQELFGQAADNCLN+KKP+
Sbjct: 143 QVQELFGQAADNCLNMKKPE 162


>ref|XP_002519303.1| conserved hypothetical protein [Ricinus communis]
           gi|223541618|gb|EEF43167.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 135

 Score =  163 bits (413), Expect = 4e-38
 Identities = 89/138 (64%), Positives = 100/138 (72%)
 Frame = +3

Query: 225 MDIISQLQEQVNTVASLAFNTFGTLQRDAPPVQLSXXXXXXXXXXXXXXXXXLAEQPKLL 404
           MDIISQLQEQV+T+ASLAFNT GTLQRDAPPV+LS                 +A+QPKL+
Sbjct: 1   MDIISQLQEQVDTIASLAFNTIGTLQRDAPPVRLSPNYPEPPASNPAED---IADQPKLM 57

Query: 405 SSELVKAAKQFDXXXXXXXXXXXXXXXQLQRIVELQAENDVIGQELQKQLEAAEKELRQV 584
           S+ LVKAAKQFD               QL+RI ELQAEND +GQELQ+QLEAAEKEL+QV
Sbjct: 58  SAALVKAAKQFDALVAALPLAEGGEEAQLKRIAELQAENDAVGQELQRQLEAAEKELKQV 117

Query: 585 QELFGQAADNCLNLKKPD 638
           QELF QA DNCLNLKKPD
Sbjct: 118 QELFSQATDNCLNLKKPD 135


>emb|CAB80843.1| hypothetical protein [Arabidopsis thaliana]
          Length = 381

 Score =  163 bits (413), Expect = 4e-38
 Identities = 89/140 (63%), Positives = 99/140 (70%), Gaps = 1/140 (0%)
 Frame = +3

Query: 222 KMDIISQLQEQVNTVASLAFNTFGTLQRDAPPVQLSXXXXXXXXXXXXXXXXX-LAEQPK 398
           KMDIISQLQEQVNT+A++ FN FGTLQRDAPPVQLS                    EQPK
Sbjct: 242 KMDIISQLQEQVNTIAAITFNAFGTLQRDAPPVQLSPNYPEPPATTTVTDDATPFPEQPK 301

Query: 399 LLSSELVKAAKQFDXXXXXXXXXXXXXXXQLQRIVELQAENDVIGQELQKQLEAAEKELR 578
            LS+ LVKAAKQFD               QL+RI ELQ END++GQELQKQLEAAEKEL+
Sbjct: 302 QLSAGLVKAAKQFDALVAALPLSEGGEGAQLKRIAELQVENDLVGQELQKQLEAAEKELK 361

Query: 579 QVQELFGQAADNCLNLKKPD 638
           QVQELFGQAADNCLN+KKP+
Sbjct: 362 QVQELFGQAADNCLNMKKPE 381


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