BLASTX nr result

ID: Salvia21_contig00018362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00018362
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285257.1| PREDICTED: exosome complex component MTR3 [V...    80   9e-28
ref|XP_003606365.1| Exosome complex exonuclease MTR3 [Medicago t...    75   2e-27
ref|XP_002314284.1| predicted protein [Populus trichocarpa] gi|2...    73   4e-27
gb|ABK95685.1| unknown [Populus trichocarpa]                           73   4e-27
gb|ABK96391.1| unknown [Populus trichocarpa x Populus deltoides]       73   2e-26

>ref|XP_002285257.1| PREDICTED: exosome complex component MTR3 [Vitis vinifera]
           gi|147834996|emb|CAN61380.1| hypothetical protein
           VITISV_037546 [Vitis vinifera]
           gi|297746275|emb|CBI16331.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score = 80.1 bits (196), Expect(2) = 9e-28
 Identities = 36/45 (80%), Positives = 43/45 (95%)
 Frame = +2

Query: 2   MVASVSVSCIGKNLLIDPVSEEESHQDGGLMITCMPSRNEVTQMT 136
           +VASVSVSC+GKNL+IDP+ EEES+QDG L+ITCMPSRNEVTQ+T
Sbjct: 169 LVASVSVSCLGKNLVIDPILEEESYQDGSLLITCMPSRNEVTQLT 213



 Score = 68.6 bits (166), Expect(2) = 9e-28
 Identities = 29/39 (74%), Positives = 36/39 (92%)
 Frame = +3

Query: 219 GEWSTTKINEAMQLCLDACSKLGKIMRSCLKEAASAPQD 335
           GEWST +++EAMQ+CL+ACSKL KI+RSCLKE ASAP+D
Sbjct: 216 GEWSTPRVHEAMQICLEACSKLAKIIRSCLKETASAPKD 254


>ref|XP_003606365.1| Exosome complex exonuclease MTR3 [Medicago truncatula]
           gi|355507420|gb|AES88562.1| Exosome complex exonuclease
           MTR3 [Medicago truncatula]
          Length = 258

 Score = 75.5 bits (184), Expect(2) = 2e-27
 Identities = 34/45 (75%), Positives = 41/45 (91%)
 Frame = +2

Query: 2   MVASVSVSCIGKNLLIDPVSEEESHQDGGLMITCMPSRNEVTQMT 136
           +VASVSVSC+GKNL+IDP+ EEE+ QDG LMITCMPSR E+TQ+T
Sbjct: 170 LVASVSVSCLGKNLVIDPIFEEENSQDGSLMITCMPSRYEITQLT 214



 Score = 71.6 bits (174), Expect(2) = 2e-27
 Identities = 33/40 (82%), Positives = 35/40 (87%)
 Frame = +3

Query: 216 TGEWSTTKINEAMQLCLDACSKLGKIMRSCLKEAASAPQD 335
           TGEWST KINE MQLCLDAC+KL KIMRSCLKE+AS  QD
Sbjct: 216 TGEWSTPKINEGMQLCLDACAKLAKIMRSCLKESASDAQD 255


>ref|XP_002314284.1| predicted protein [Populus trichocarpa] gi|222850692|gb|EEE88239.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score = 73.2 bits (178), Expect(2) = 4e-27
 Identities = 33/45 (73%), Positives = 40/45 (88%)
 Frame = +2

Query: 2   MVASVSVSCIGKNLLIDPVSEEESHQDGGLMITCMPSRNEVTQMT 136
           +VA VSVSC+G+NL+IDP+ EEES QDG LMITCMPSR EVTQ++
Sbjct: 172 LVAGVSVSCLGRNLIIDPILEEESFQDGSLMITCMPSRYEVTQLS 216



 Score = 73.2 bits (178), Expect(2) = 4e-27
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = +3

Query: 216 TGEWSTTKINEAMQLCLDACSKLGKIMRSCLKEAASAPQD 335
           TGEWST K+NEAMQLCLDACSKL KIMR+CLKEAASA  D
Sbjct: 218 TGEWSTAKLNEAMQLCLDACSKLDKIMRACLKEAASASLD 257


>gb|ABK95685.1| unknown [Populus trichocarpa]
          Length = 257

 Score = 73.2 bits (178), Expect(2) = 4e-27
 Identities = 33/45 (73%), Positives = 40/45 (88%)
 Frame = +2

Query: 2   MVASVSVSCIGKNLLIDPVSEEESHQDGGLMITCMPSRNEVTQMT 136
           +VA VSVSC+G+NL+IDP+ EEES QDG LMITCMPSR EVTQ++
Sbjct: 172 LVAGVSVSCLGRNLIIDPILEEESFQDGSLMITCMPSRYEVTQLS 216



 Score = 73.2 bits (178), Expect(2) = 4e-27
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = +3

Query: 216 TGEWSTTKINEAMQLCLDACSKLGKIMRSCLKEAASAPQD 335
           TGEWST K+NEAMQLCLDACSKL KIMR+CLKEAASA  D
Sbjct: 218 TGEWSTAKLNEAMQLCLDACSKLDKIMRACLKEAASASLD 257


>gb|ABK96391.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 257

 Score = 73.2 bits (178), Expect(2) = 2e-26
 Identities = 33/45 (73%), Positives = 40/45 (88%)
 Frame = +2

Query: 2   MVASVSVSCIGKNLLIDPVSEEESHQDGGLMITCMPSRNEVTQMT 136
           +VA VSVSC+G+NL+IDP+ EEES QDG LMITCMPSR EVTQ++
Sbjct: 172 LVAGVSVSCLGRNLIIDPILEEESFQDGSLMITCMPSRYEVTQLS 216



 Score = 71.2 bits (173), Expect(2) = 2e-26
 Identities = 33/40 (82%), Positives = 35/40 (87%)
 Frame = +3

Query: 216 TGEWSTTKINEAMQLCLDACSKLGKIMRSCLKEAASAPQD 335
           TGEWST K+NEAM LCLDACSKL KIMR+CLKEAASA  D
Sbjct: 218 TGEWSTAKLNEAMHLCLDACSKLDKIMRACLKEAASASLD 257


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