BLASTX nr result

ID: Salvia21_contig00018238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00018238
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314516.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]   109   3e-22
ref|XP_002518208.1| pentatricopeptide repeat-containing protein,...   107   8e-22
ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21
ref|XP_003590730.1| Pentatricopeptide repeat-containing protein ...   103   1e-20

>ref|XP_002314516.1| predicted protein [Populus trichocarpa] gi|222863556|gb|EEF00687.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/111 (52%), Positives = 77/111 (69%), Gaps = 1/111 (0%)
 Frame = +2

Query: 50  LVDAFTFSVMFKIVGEFGEILLGKMVHGRSLKSGLVLDIVAGNSLMSMYEKCGCFDDSLK 229
           L+D +T + M K+  E G++  GK++HG+SLK+G VLD++  NSLMSMY KCG F + LK
Sbjct: 125 LLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFVLDVIVANSLMSMYSKCGGFGECLK 184

Query: 230 VFDEMPLRNVSSWNALISGYA-KGSWNSSVCRLGLWDIVREMQMEGLKFDA 379
           +FDEMP RNV SWN ++SGYA  G  N      G    V++MQ+EGLK DA
Sbjct: 185 LFDEMPERNVGSWNVILSGYADSGDRNFDKEVSG---FVKDMQIEGLKPDA 232


>emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
          Length = 625

 Score =  109 bits (272), Expect = 3e-22
 Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   ESLDVFRKMWDNSDFGLVDAFTFSVMFKIVGEFGEILLGKMVHGRSLKSGLVLDIVAGNS 181
           E+  +F +M  +SD  L D FT S + K+  E G +  GK +HG+S+++G V D V  NS
Sbjct: 107 EAFQLFNQMC-SSDV-LPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVSDTVVANS 164

Query: 182 LMSMYEKCGCFDDSLKVFDEMPLRNVSSWNALISGYA-KGSWNSSVCRLGLWDIVREMQM 358
           +MSMY KCG FD+S KVFDEM +RN  SWN LI+GYA  G+ N    R   W+ V++MQM
Sbjct: 165 IMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCN---FREETWEFVKQMQM 221

Query: 359 EGLKFDA 379
           + ++ DA
Sbjct: 222 DEVRPDA 228


>ref|XP_002518208.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542804|gb|EEF44341.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 506

 Score =  107 bits (268), Expect = 8e-22
 Identities = 59/128 (46%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
 Frame = +2

Query: 2   ESLDVFRKMWDNSDFGLV-DAFTFSVMFKIVGEFGEILLGKMVHGRSLKSGLVLDIVAGN 178
           ES  +F +M     FG++ D +T + + K+ GE G ++ GK++HG SLK G VLD V  N
Sbjct: 111 ESFSLFCQM---CSFGVLPDDYTLATLSKVCGEIGHLIAGKIIHGLSLKIGFVLDTVVAN 167

Query: 179 SLMSMYEKCGCFDDSLKVFDEMPLRNVSSWNALISGYA-KGSWNSSVCRLGLWDIVREMQ 355
           SLMSMY KCG F ++LK+FDEMP R+V SWN +I+GY+  G  N       + D+V++MQ
Sbjct: 168 SLMSMYCKCGEFSEALKLFDEMPERSVGSWNVVIAGYSDSGDRN---LNQQIVDLVKDMQ 224

Query: 356 MEGLKFDA 379
           ++G K +A
Sbjct: 225 IDGFKPNA 232


>ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Vitis vinifera]
          Length = 625

 Score =  106 bits (265), Expect = 2e-21
 Identities = 59/127 (46%), Positives = 82/127 (64%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   ESLDVFRKMWDNSDFGLVDAFTFSVMFKIVGEFGEILLGKMVHGRSLKSGLVLDIVAGNS 181
           E+  +F +M  +SD  L D FT S + K+  E G +  GK +HG+S++ G V D V  NS
Sbjct: 107 EAFQLFNQMC-SSDV-LPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANS 164

Query: 182 LMSMYEKCGCFDDSLKVFDEMPLRNVSSWNALISGYA-KGSWNSSVCRLGLWDIVREMQM 358
           +MSMY KCG F++S KVFDEM +RN  SWN LI+GYA  G+ N    R   W+ V++MQM
Sbjct: 165 IMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCN---FREETWEFVKQMQM 221

Query: 359 EGLKFDA 379
           + ++ DA
Sbjct: 222 DEVRPDA 228


>ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479778|gb|AES60981.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 627

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
 Frame = +2

Query: 50  LVDAFTFSVMFKIVGEFGEILLGKMVHGRSLKSGLVLDIVAGNSLMSMYEKCGCFDDSLK 229
           L D +T + + K+ GE  +++LGK++HG+SL+ G V DIV GNS+MSMY +C  F D++K
Sbjct: 123 LPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMK 182

Query: 230 VFDEMPLRNVSSWNALISGYAK-GSWNSSVCRLGLWDIVREMQMEGLKFDA 379
           VFDEMP RNV S+N +ISG A  G+ + S+    LW+  R MQ +G   DA
Sbjct: 183 VFDEMPQRNVGSFNVIISGCAALGNLDYSL-YADLWNFFRRMQCQGYNADA 232


Top