BLASTX nr result

ID: Salvia21_contig00017917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00017917
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO07412.1| centromere protein C1, partial [Solanum lycopersi...   121   1e-25
gb|AAU04630.1| CENP-C [Solanum lycopersicum]                          121   1e-25
dbj|BAI48085.1| centromere protein C [Nicotiana tomentosiformis]      115   9e-24
dbj|BAI48084.1| centromere protein C homologue [Nicotiana tabacum]    113   3e-23
dbj|BAI48081.1| centromere protein C homologue [Nicotiana tabacu...   112   8e-23

>gb|ABO07412.1| centromere protein C1, partial [Solanum lycopersicum]
          Length = 173

 Score =  121 bits (304), Expect = 1e-25
 Identities = 65/139 (46%), Positives = 95/139 (68%)
 Frame = -2

Query: 527 NINDNESNPSVIDEEARNDASIRRQINPEQQEVHAVKQKRGKRVAGDKRIRDAHPMRKSL 348
           ++N ++ N   ++  +R+      +++P+  +    KQ++ K +A  +R R     R SL
Sbjct: 40  DLNSDQLNSVGVEVPSRDVRPKFPEMSPQHHKQAKDKQQKAKELAVGRRERKHLSSRPSL 99

Query: 347 AEAGTTFETGVRRSKRIRMRPLEYWKGERFLYGRVEDSFKLIGLKYISPEKGNENLKVKP 168
           A+AGT+FE+GVRRSKR++ RPLEYWKGER LYGRV++  KL+GLKYISP KG  + KVK 
Sbjct: 100 ADAGTSFESGVRRSKRMKTRPLEYWKGERLLYGRVDEGLKLVGLKYISPGKG--SFKVKS 157

Query: 167 YILSEKPEYKELLDLAARH 111
           YI     +YK+L+DLAAR+
Sbjct: 158 YI---PDDYKDLVDLAARY 173


>gb|AAU04630.1| CENP-C [Solanum lycopersicum]
          Length = 138

 Score =  121 bits (304), Expect = 1e-25
 Identities = 65/139 (46%), Positives = 95/139 (68%)
 Frame = -2

Query: 527 NINDNESNPSVIDEEARNDASIRRQINPEQQEVHAVKQKRGKRVAGDKRIRDAHPMRKSL 348
           ++N ++ N   ++  +R+      +++P+  +    KQ++ K +A  +R R     R SL
Sbjct: 5   DLNSDQLNSVGVEVPSRDVRPKFPEMSPQHHKQAKDKQQKAKELAVGRRERKHLSSRPSL 64

Query: 347 AEAGTTFETGVRRSKRIRMRPLEYWKGERFLYGRVEDSFKLIGLKYISPEKGNENLKVKP 168
           A+AGT+FE+GVRRSKR++ RPLEYWKGER LYGRV++  KL+GLKYISP KG  + KVK 
Sbjct: 65  ADAGTSFESGVRRSKRMKTRPLEYWKGERLLYGRVDEGLKLVGLKYISPGKG--SFKVKS 122

Query: 167 YILSEKPEYKELLDLAARH 111
           YI     +YK+L+DLAAR+
Sbjct: 123 YI---PDDYKDLVDLAARY 138


>dbj|BAI48085.1| centromere protein C [Nicotiana tomentosiformis]
          Length = 714

 Score =  115 bits (287), Expect = 9e-24
 Identities = 62/150 (41%), Positives = 94/150 (62%)
 Frame = -2

Query: 560  EEPNNNSGEAMNINDNESNPSVIDEEARNDASIRRQINPEQQEVHAVKQKRGKRVAGDKR 381
            E+ ++       +  ++ +   ++  +    S    ++P+       KQ + KR AG +R
Sbjct: 570  EQDHHFEDSVKGVTSDQLSSVAVEVHSTEVRSKLPDMSPQHHAKAKDKQPKAKRPAGGRR 629

Query: 380  IRDAHPMRKSLAEAGTTFETGVRRSKRIRMRPLEYWKGERFLYGRVEDSFKLIGLKYISP 201
               A   R SLA+AGT+F+ GVRRSKR++ RPLEYWKGER L+GRV DS KL+G+KYISP
Sbjct: 630  ESKALRSRPSLADAGTSFQDGVRRSKRMKTRPLEYWKGERLLFGRVNDSLKLVGVKYISP 689

Query: 200  EKGNENLKVKPYILSEKPEYKELLDLAARH 111
             KG  ++KV+ +I     +YK+L++LAAR+
Sbjct: 690  GKG--SVKVESFI---SDDYKDLVELAARY 714


>dbj|BAI48084.1| centromere protein C homologue [Nicotiana tabacum]
          Length = 714

 Score =  113 bits (283), Expect = 3e-23
 Identities = 61/150 (40%), Positives = 94/150 (62%)
 Frame = -2

Query: 560  EEPNNNSGEAMNINDNESNPSVIDEEARNDASIRRQINPEQQEVHAVKQKRGKRVAGDKR 381
            E+ ++       +  ++ +   ++  +    S    ++P+       KQ + +R AG +R
Sbjct: 570  EQDHHFEDSVKGVTSDQLSSVAVEVHSTEVRSKLPDMSPQHHAKAKDKQPKAERPAGGRR 629

Query: 380  IRDAHPMRKSLAEAGTTFETGVRRSKRIRMRPLEYWKGERFLYGRVEDSFKLIGLKYISP 201
               A   R SLA+AGT+F+ GVRRSKR++ RPLEYWKGER L+GRV DS KL+G+KYISP
Sbjct: 630  ESKALRSRPSLADAGTSFQDGVRRSKRMKTRPLEYWKGERLLFGRVNDSLKLVGVKYISP 689

Query: 200  EKGNENLKVKPYILSEKPEYKELLDLAARH 111
             KG  ++KV+ +I     +YK+L++LAAR+
Sbjct: 690  GKG--SVKVESFI---SDDYKDLVELAARY 714


>dbj|BAI48081.1| centromere protein C homologue [Nicotiana tabacum]
            gi|262263167|dbj|BAI48086.1| centromere protein C
            [Nicotiana sylvestris]
          Length = 715

 Score =  112 bits (279), Expect = 8e-23
 Identities = 60/150 (40%), Positives = 93/150 (62%)
 Frame = -2

Query: 560  EEPNNNSGEAMNINDNESNPSVIDEEARNDASIRRQINPEQQEVHAVKQKRGKRVAGDKR 381
            E+ ++      ++  ++ +   ++  +    S    ++P+       KQ + KR AG +R
Sbjct: 571  EQDHHFEDSVKDVTSDQLSSVAVEVHSTEVRSKLPDMSPQHHAKAKDKQPKAKRPAGGRR 630

Query: 380  IRDAHPMRKSLAEAGTTFETGVRRSKRIRMRPLEYWKGERFLYGRVEDSFKLIGLKYISP 201
               A   R SLA+AGT+F+ GVRRSKR++ RPLEYWKGER LYG + DS KL+G+KY+SP
Sbjct: 631  ESKALRSRPSLADAGTSFQDGVRRSKRMKTRPLEYWKGERLLYGWINDSLKLVGVKYLSP 690

Query: 200  EKGNENLKVKPYILSEKPEYKELLDLAARH 111
             KG  ++KV+ YI     +YK+L++ AAR+
Sbjct: 691  GKG--SVKVESYI---SDDYKDLVESAARY 715


Top