BLASTX nr result

ID: Salvia21_contig00017882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00017882
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873637.1| zinc knuckle (CCHC-type) family protein [Ara...    69   2e-09
ref|NP_196896.1| endonuclease VIII-like 3 [Arabidopsis thaliana]...    65   3e-08
ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyr...    59   2e-06
emb|CBI21257.3| unnamed protein product [Vitis vinifera]               59   3e-06
ref|NP_001051489.1| Os03g0786500 [Oryza sativa Japonica Group] g...    58   5e-06

>ref|XP_002873637.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297319474|gb|EFH49896.1| zinc knuckle
           (CCHC-type) family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 397

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
 Frame = -3

Query: 919 CSAGICQLKRSTTPQNRGCYYFTCP-ARTHKSFKWANKV--EPHEWMP---VPYCGGCNA 758
           C  G C++K + T +N G  ++ CP A+  K FKW +KV  E   + P   +P C  C A
Sbjct: 37  CGGGFCEIKVANTRENPGRKFYKCPTAQNCKFFKWCDKVTDEDIRFRPAFTIPICS-CGA 95

Query: 757 GVCRVKRETSGPNAGRLMFLCTIKEGQGSCGYRVWQD 647
           G CR  ++ SG    R   +C IKEG G+CG+  W+D
Sbjct: 96  GPCRRVKDVSG----RAYLICCIKEGFGACGFFKWED 128


>ref|NP_196896.1| endonuclease VIII-like 3 [Arabidopsis thaliana]
           gi|10177658|dbj|BAB11120.1| unnamed protein product
           [Arabidopsis thaliana] gi|332004577|gb|AED91960.1|
           endonuclease VIII-like 3 [Arabidopsis thaliana]
          Length = 415

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
 Frame = -3

Query: 919 CSAGICQLKRSTTPQNRGCYYFTCP-ARTHKSFKWANKV--EPHEWMP---VPYCGGCNA 758
           C  G C++K + T +N G  ++ CP A+    FKW +KV  E  ++ P   +P C  C A
Sbjct: 41  CGGGFCEIKVANTRENPGRKFYKCPTAQNCCFFKWCDKVTDEDIKFRPAFTIPICS-CGA 99

Query: 757 GVCRVKRETSGPNAGRLMFLCTIKEGQGSCGYRVWQD 647
           G CR  ++ SG    R   +C IK+G G+CG+  W+D
Sbjct: 100 GPCRRVKDVSG----RAYLICCIKKGFGACGFFKWED 132


>ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321433|gb|EFH51854.1| zinc knuckle family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 337

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 16/105 (15%)
 Frame = -3

Query: 919 CSAGICQLKRSTTPQNRGCYYFTCPARTHKS----FKWANKVEP-----HEW-------M 788
           C  G+C +  STTP+N G  ++ CP R        F+W + V+      H +        
Sbjct: 97  CGVGLCLVLTSTTPKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTTTHSYGNTNDSKF 156

Query: 787 PVPYCGGCNAGVCRVKRETSGPNAGRLMFLCTIKEGQGSCGYRVW 653
           P   C  C AG+CRV    +G N GR  + C + E  GSCG+  W
Sbjct: 157 PDHQCP-CGAGLCRVLTAKTGENVGRQFYRCPVFE--GSCGFFKW 198


>emb|CBI21257.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 21/40 (52%), Positives = 29/40 (72%)
 Frame = -3

Query: 766 CNAGVCRVKRETSGPNAGRLMFLCTIKEGQGSCGYRVWQD 647
           C AG+CR+  E  GPNAGR  F+C +K+GQG+C +  W+D
Sbjct: 4   CGAGICRISMEKFGPNAGRRSFICPVKKGQGACNFFQWED 43


>ref|NP_001051489.1| Os03g0786500 [Oryza sativa Japonica Group]
           gi|50355715|gb|AAT75240.1| putative DNA-binding protein
           [Oryza sativa Japonica Group]
           gi|108711439|gb|ABF99234.1| GRF zinc finger family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113549960|dbj|BAF13403.1| Os03g0786500 [Oryza sativa
           Japonica Group] gi|215741242|dbj|BAG97737.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222625927|gb|EEE60059.1| hypothetical protein
           OsJ_12863 [Oryza sativa Japonica Group]
          Length = 384

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 18/109 (16%)
 Frame = -3

Query: 919 CSAGICQLKRSTTPQNRGCYYFTCPARTHKS---FKWANKVEPHEWMPVPYCGG------ 767
           C AG C +  S TP+N G  ++ CP R +     F+W +   P    P    G       
Sbjct: 165 CGAGSCLVLTSNTPRNPGRKFYRCPMRDNGGCNYFEWCDNPSPG---PANVSGNTVFQSD 221

Query: 766 ---------CNAGVCRVKRETSGPNAGRLMFLCTIKEGQGSCGYRVWQD 647
                    C AG C +    +G N GR  + C   +G  SCGY  W D
Sbjct: 222 TSVAHMLCPCGAGACLILTTKTGKNVGRQFYRCPANQGGSSCGYFKWCD 270


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