BLASTX nr result
ID: Salvia21_contig00017710
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Salvia21_contig00017710 (319 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003523234.1| PREDICTED: high mobility group B protein 9-l... 110 9e-23 ref|XP_002889059.1| high mobility group family protein [Arabidop... 110 2e-22 ref|XP_002307758.1| high mobility group family [Populus trichoca... 108 5e-22 ref|NP_177738.1| high mobility group-box and ARID domain-binding... 106 2e-21 gb|ABK95398.1| unknown [Populus trichocarpa] 106 2e-21 >ref|XP_003523234.1| PREDICTED: high mobility group B protein 9-like [Glycine max] Length = 322 Score = 110 bits (276), Expect = 9e-23 Identities = 51/70 (72%), Positives = 59/70 (84%) Frame = -3 Query: 212 GGEIPVPLASHDDVVKDRTLFFNTLRSFHFALASKFLIPVIGGKELNLHVLYVEVTRRGG 33 G P PLA H+ VVKD TLF++TLR FHF + +KF+IPVIGGKEL+LHVLYVEVTRR G Sbjct: 13 GKHYPAPLAPHEGVVKDSTLFWDTLRRFHFVMGTKFMIPVIGGKELDLHVLYVEVTRRSG 72 Query: 32 YDKVVAEKKW 3 Y+KVVAEKKW Sbjct: 73 YEKVVAEKKW 82 >ref|XP_002889059.1| high mobility group family protein [Arabidopsis lyrata subsp. lyrata] gi|297334900|gb|EFH65318.1| high mobility group family protein [Arabidopsis lyrata subsp. lyrata] Length = 338 Score = 110 bits (274), Expect = 2e-22 Identities = 53/77 (68%), Positives = 66/77 (85%) Frame = -3 Query: 233 SPEKLRNGGEIPVPLASHDDVVKDRTLFFNTLRSFHFALASKFLIPVIGGKELNLHVLYV 54 SP K++ E P PLASH+ VVKD ++F++TLR FH +++KF+IPVIGGKEL+LHVLYV Sbjct: 20 SPAKIK---EYPEPLASHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYV 76 Query: 53 EVTRRGGYDKVVAEKKW 3 EVTRRGGY+KVVAEKKW Sbjct: 77 EVTRRGGYEKVVAEKKW 93 >ref|XP_002307758.1| high mobility group family [Populus trichocarpa] gi|222857207|gb|EEE94754.1| high mobility group family [Populus trichocarpa] Length = 329 Score = 108 bits (270), Expect = 5e-22 Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 3/80 (3%) Frame = -3 Query: 233 SPEKLRNGGE---IPVPLASHDDVVKDRTLFFNTLRSFHFALASKFLIPVIGGKELNLHV 63 S KL+ G E P PLASH+DVV D ++F++TLR FHF + +KF+IPVIGGKEL+L V Sbjct: 5 SKRKLKAGMENKHYPAPLASHEDVVNDPSVFWDTLRRFHFVMGTKFMIPVIGGKELDLQV 64 Query: 62 LYVEVTRRGGYDKVVAEKKW 3 LYVE T RGGYDKVVAEKKW Sbjct: 65 LYVETTNRGGYDKVVAEKKW 84 >ref|NP_177738.1| high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] gi|75265821|sp|Q9SGS2.1|HMGB9_ARATH RecName: Full=High mobility group B protein 9; AltName: Full=Nucleosome/chromatin assembly factor group D 09; Short=Nucleosome/chromatin assembly factor group D 9 gi|6573729|gb|AAF17649.1|AC009978_25 T23E18.4 [Arabidopsis thaliana] gi|20466328|gb|AAM20481.1| unknown protein [Arabidopsis thaliana] gi|31711812|gb|AAP68262.1| At1g76110 [Arabidopsis thaliana] gi|332197676|gb|AEE35797.1| high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] Length = 338 Score = 106 bits (265), Expect = 2e-21 Identities = 52/84 (61%), Positives = 66/84 (78%) Frame = -3 Query: 254 TTLSLLMSPEKLRNGGEIPVPLASHDDVVKDRTLFFNTLRSFHFALASKFLIPVIGGKEL 75 T + SP K++ E P PLA H+ VVKD ++F++TLR FH +++KF+IPVIGGKEL Sbjct: 13 TVEMMATSPAKIK---EYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKEL 69 Query: 74 NLHVLYVEVTRRGGYDKVVAEKKW 3 +LHVLYVEVTRRGGY+KVV EKKW Sbjct: 70 DLHVLYVEVTRRGGYEKVVVEKKW 93 >gb|ABK95398.1| unknown [Populus trichocarpa] Length = 317 Score = 106 bits (265), Expect = 2e-21 Identities = 48/66 (72%), Positives = 57/66 (86%) Frame = -3 Query: 200 PVPLASHDDVVKDRTLFFNTLRSFHFALASKFLIPVIGGKELNLHVLYVEVTRRGGYDKV 21 P PLASH+DVV D ++F++TLR FHF + +KF+IPVIGGKEL+L VLYVE T RGGYDKV Sbjct: 7 PAPLASHEDVVNDPSVFWDTLRRFHFVMGTKFMIPVIGGKELDLQVLYVETTNRGGYDKV 66 Query: 20 VAEKKW 3 VAEKKW Sbjct: 67 VAEKKW 72