BLASTX nr result

ID: Salvia21_contig00017388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00017388
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871294.1| mitochondrial transcription termination fact...   176   9e-42
ref|XP_002520664.1| conserved hypothetical protein [Ricinus comm...   172   8e-41
ref|NP_568185.1| Mitochondrial transcription termination factor ...   172   1e-40
ref|XP_002520663.1| conserved hypothetical protein [Ricinus comm...   164   2e-38
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...   159   7e-37

>ref|XP_002871294.1| mitochondrial transcription termination factor family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317131|gb|EFH47553.1| mitochondrial transcription
           termination factor family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 404

 Score =  176 bits (445), Expect = 9e-42
 Identities = 82/158 (51%), Positives = 114/158 (72%), Gaps = 2/158 (1%)
 Frame = +2

Query: 11  ELKRVADEVKQLGFDPLKSTFILAINARKGEG--SVWDKCNGVYSKWGWSEDDIRMAFKK 184
           E + +A + +++GF+P KSTF+LAI+A  G+G  S+WDKC  VY +WGWSEDDI  AFKK
Sbjct: 242 EFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKK 301

Query: 185 HPSCMLLSEKKISAAMDFLVNKLGRESRVIAKSPQVLFYSLKERIVPRCSXXXXXXXXXX 364
           HP CM+LSE+KI+  M+F VN++    R IA+ P VLF+SL++RI+PRCS          
Sbjct: 302 HPHCMMLSERKINRTMEFFVNEMNLAPRSIAECPVVLFFSLEKRIIPRCSVTKVLVSNGL 361

Query: 365 XXKDWNLSSVLSPVESKFLDKYVSRYIEKMPQLYDVYL 478
             +DW+L+S+L PVE  FL+K V +Y E++P+L DVYL
Sbjct: 362 VKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMDVYL 399


>ref|XP_002520664.1| conserved hypothetical protein [Ricinus communis]
           gi|223540049|gb|EEF41626.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score =  172 bits (437), Expect = 8e-41
 Identities = 83/157 (52%), Positives = 114/157 (72%), Gaps = 2/157 (1%)
 Frame = +2

Query: 11  ELKRVADEVKQLGFDPLKSTFILAINARKGEG--SVWDKCNGVYSKWGWSEDDIRMAFKK 184
           +  ++  EV+++ FDP KSTF+LA++A  G+G  S+W+KC  VY +WGWS+DDI  AFKK
Sbjct: 236 KFSKIVKEVREMEFDPKKSTFVLAVHAISGKGNKSIWNKCFEVYMRWGWSKDDIFAAFKK 295

Query: 185 HPSCMLLSEKKISAAMDFLVNKLGRESRVIAKSPQVLFYSLKERIVPRCSXXXXXXXXXX 364
           HP CM+LSEKKI  AMDF VNK+G  S+VIA+ P VLF+SL++RIVPRC           
Sbjct: 296 HPHCMMLSEKKIMKAMDFFVNKMGFPSKVIAQCPVVLFFSLEKRIVPRCRVIRVLMNKRL 355

Query: 365 XXKDWNLSSVLSPVESKFLDKYVSRYIEKMPQLYDVY 475
             +D +L+SVL PVE  FLD++V+R+ E++P+L  VY
Sbjct: 356 VKEDVSLASVLLPVEQCFLDRFVTRFAEEIPRLLSVY 392


>ref|NP_568185.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana]
           gi|13878065|gb|AAK44110.1|AF370295_1 unknown protein
           [Arabidopsis thaliana] gi|6562304|emb|CAB62602.1|
           putative protein [Arabidopsis thaliana]
           gi|10176724|dbj|BAB09954.1| unnamed protein product
           [Arabidopsis thaliana] gi|17104655|gb|AAL34216.1|
           unknown protein [Arabidopsis thaliana]
           gi|21592327|gb|AAM64278.1| unknown [Arabidopsis
           thaliana] gi|332003836|gb|AED91219.1| Mitochondrial
           transcription termination factor family protein
           [Arabidopsis thaliana]
          Length = 405

 Score =  172 bits (435), Expect = 1e-40
 Identities = 79/158 (50%), Positives = 114/158 (72%), Gaps = 2/158 (1%)
 Frame = +2

Query: 11  ELKRVADEVKQLGFDPLKSTFILAINARKGEG--SVWDKCNGVYSKWGWSEDDIRMAFKK 184
           E + +A + +++GF+P KSTF+LAI+A  G+G  S+WDKC  VY +WGWSEDDI  AFKK
Sbjct: 243 EFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKK 302

Query: 185 HPSCMLLSEKKISAAMDFLVNKLGRESRVIAKSPQVLFYSLKERIVPRCSXXXXXXXXXX 364
           HP CM+LSE+KI+  M++ VN++    R IA+ P VLF+SL++RI+PRCS          
Sbjct: 303 HPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGL 362

Query: 365 XXKDWNLSSVLSPVESKFLDKYVSRYIEKMPQLYDVYL 478
             +DW+L+S+L PVE  FL+K V +Y E++P+L ++YL
Sbjct: 363 VKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLYL 400


>ref|XP_002520663.1| conserved hypothetical protein [Ricinus communis]
           gi|223540048|gb|EEF41625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 377

 Score =  164 bits (416), Expect = 2e-38
 Identities = 80/157 (50%), Positives = 109/157 (69%), Gaps = 2/157 (1%)
 Frame = +2

Query: 11  ELKRVADEVKQLGFDPLKSTFILAINARKGEGS--VWDKCNGVYSKWGWSEDDIRMAFKK 184
           E  +V  EVK++GFDP KS F++A++A  G+ +  +W+KC  VY +W WS+DDI  AFKK
Sbjct: 211 EFNKVVKEVKEMGFDPKKSIFVMAVHAISGKSNKAIWNKCFEVYKRWDWSKDDIFAAFKK 270

Query: 185 HPSCMLLSEKKISAAMDFLVNKLGRESRVIAKSPQVLFYSLKERIVPRCSXXXXXXXXXX 364
           HP CM+LSEKKI  AMDF VNK+G  S+VIA+ P +LF+SL++RIVPRC           
Sbjct: 271 HPHCMMLSEKKIMLAMDFFVNKMGLPSKVIAQCPVLLFFSLEKRIVPRCRVIRVLMNKGL 330

Query: 365 XXKDWNLSSVLSPVESKFLDKYVSRYIEKMPQLYDVY 475
             KD +L++VL P E  FLD++V +Y E++P L  VY
Sbjct: 331 VKKDVSLATVLVPTEKCFLDRFVIKYEEEVPLLLRVY 367


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  159 bits (403), Expect = 7e-37
 Identities = 74/157 (47%), Positives = 109/157 (69%), Gaps = 2/157 (1%)
 Frame = +2

Query: 11  ELKRVADEVKQLGFDPLKSTFILAINARKGE--GSVWDKCNGVYSKWGWSEDDIRMAFKK 184
           E     +EV+++GFDP KSTF+LA++A  G+   S+W++C  VY +WGW++DDI  AF+K
Sbjct: 235 EFSENVEEVRKMGFDPNKSTFVLAVHALCGKCNKSIWERCFEVYKRWGWTKDDILSAFRK 294

Query: 185 HPSCMLLSEKKISAAMDFLVNKLGRESRVIAKSPQVLFYSLKERIVPRCSXXXXXXXXXX 364
           HP CM+LSEKKI   +DF VNK+G  S+ I   P +LF SL++RI+PRC           
Sbjct: 295 HPHCMMLSEKKIMKGLDFFVNKMGWPSKEIVHCPVILFLSLEKRIIPRCKVIQVLWSKGL 354

Query: 365 XXKDWNLSSVLSPVESKFLDKYVSRYIEKMPQLYDVY 475
             KD +L++VL PVE +FL+++V+++ E++PQL  VY
Sbjct: 355 IKKDISLNTVLLPVEKRFLERFVTKFEEEVPQLLSVY 391


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