BLASTX nr result
ID: Salvia21_contig00017312
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Salvia21_contig00017312 (313 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAC68670.1| RING-H2 finger protein RHA1b [Arabidopsis thalian... 75 7e-12 ref|NP_192875.1| E3 ubiquitin-protein ligase RHA1B [Arabidopsis ... 75 7e-12 ref|XP_002298018.1| predicted protein [Populus trichocarpa] gi|2... 74 9e-12 ref|XP_002872579.1| ring-H2 finger protein RHA1b [Arabidopsis ly... 74 2e-11 ref|XP_004143977.1| PREDICTED: RING-H2 zinc finger protein RHA1a... 73 3e-11 >gb|AAC68670.1| RING-H2 finger protein RHA1b [Arabidopsis thaliana] gi|21593210|gb|AAM65159.1| RING-H2 finger protein RHA1b [Arabidopsis thaliana] Length = 157 Score = 74.7 bits (182), Expect = 7e-12 Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%) Frame = -2 Query: 186 ISDSEYCCTICLSEFARGDEAAELVDCRHVFHRRCLERWL-RCHRATCPLCRSVVVPE 16 ++D E CCT+CLS+F D+ +L C HVFH RCL+RW+ C++ TCP+CR+ +PE Sbjct: 78 LTDPEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCPICRNRFLPE 135 >ref|NP_192875.1| E3 ubiquitin-protein ligase RHA1B [Arabidopsis thaliana] gi|51316539|sp|Q9SUS5.1|RHA1B_ARATH RecName: Full=E3 ubiquitin-protein ligase RHA1B; AltName: Full=RING-H2 zinc finger protein RHA1b gi|5596482|emb|CAB51420.1| RING-H2 finger protein RHA1b [Arabidopsis thaliana] gi|7267835|emb|CAB81237.1| RING-H2 finger protein RHA1b [Arabidopsis thaliana] gi|17529018|gb|AAL38719.1| putative RING-H2 finger protein RHA1b [Arabidopsis thaliana] gi|21436175|gb|AAM51375.1| putative RING-H2 finger protein RHA1b [Arabidopsis thaliana] gi|66865942|gb|AAY57605.1| RING finger family protein [Arabidopsis thaliana] gi|332657601|gb|AEE83001.1| E3 ubiquitin-protein ligase RHA1B [Arabidopsis thaliana] Length = 157 Score = 74.7 bits (182), Expect = 7e-12 Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%) Frame = -2 Query: 186 ISDSEYCCTICLSEFARGDEAAELVDCRHVFHRRCLERWL-RCHRATCPLCRSVVVPE 16 ++D E CCT+CLS+F D+ +L C HVFH RCL+RW+ C++ TCP+CR+ +PE Sbjct: 78 LTDPEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCPICRNRFLPE 135 >ref|XP_002298018.1| predicted protein [Populus trichocarpa] gi|222845276|gb|EEE82823.1| predicted protein [Populus trichocarpa] Length = 171 Score = 74.3 bits (181), Expect = 9e-12 Identities = 31/81 (38%), Positives = 46/81 (56%) Frame = -2 Query: 246 HTTSTYKYASIINTKTSNFAISDSEYCCTICLSEFARGDEAAELVDCRHVFHRRCLERWL 67 H+ S I+ + + S CC +CL EF DE L +CRH+FH+ CL+RW+ Sbjct: 66 HSVSALLIREILPVVKFSELVDPSADCCAVCLYEFKEVDEIRRLANCRHIFHKCCLDRWM 125 Query: 66 RCHRATCPLCRSVVVPEAVVE 4 + TCPLCR+ V+P+ + E Sbjct: 126 GYDQITCPLCRTPVIPDDMQE 146 >ref|XP_002872579.1| ring-H2 finger protein RHA1b [Arabidopsis lyrata subsp. lyrata] gi|297318416|gb|EFH48838.1| ring-H2 finger protein RHA1b [Arabidopsis lyrata subsp. lyrata] Length = 157 Score = 73.6 bits (179), Expect = 2e-11 Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%) Frame = -2 Query: 186 ISDSEYCCTICLSEFARGDEAAELVDCRHVFHRRCLERWL-RCHRATCPLCRSVVVPE 16 ++D E CCT+CLS+F D +L +C HVFH RCL+RW+ C++ TCP+CR+ +PE Sbjct: 78 LTDPEDCCTVCLSDFNSDDMIRQLPNCGHVFHHRCLDRWIVDCNKMTCPICRNRFLPE 135 >ref|XP_004143977.1| PREDICTED: RING-H2 zinc finger protein RHA1a-like, partial [Cucumis sativus] Length = 117 Score = 72.8 bits (177), Expect = 3e-11 Identities = 28/54 (51%), Positives = 36/54 (66%) Frame = -2 Query: 180 DSEYCCTICLSEFARGDEAAELVDCRHVFHRRCLERWLRCHRATCPLCRSVVVP 19 D CC +CL EF DE L +CRH+FHR CL+RW+ + TCPLCR+V +P Sbjct: 24 DPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIP 77