BLASTX nr result

ID: Salvia21_contig00017312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00017312
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC68670.1| RING-H2 finger protein RHA1b [Arabidopsis thalian...    75   7e-12
ref|NP_192875.1| E3 ubiquitin-protein ligase RHA1B [Arabidopsis ...    75   7e-12
ref|XP_002298018.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
ref|XP_002872579.1| ring-H2 finger protein RHA1b [Arabidopsis ly...    74   2e-11
ref|XP_004143977.1| PREDICTED: RING-H2 zinc finger protein RHA1a...    73   3e-11

>gb|AAC68670.1| RING-H2 finger protein RHA1b [Arabidopsis thaliana]
           gi|21593210|gb|AAM65159.1| RING-H2 finger protein RHA1b
           [Arabidopsis thaliana]
          Length = 157

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = -2

Query: 186 ISDSEYCCTICLSEFARGDEAAELVDCRHVFHRRCLERWL-RCHRATCPLCRSVVVPE 16
           ++D E CCT+CLS+F   D+  +L  C HVFH RCL+RW+  C++ TCP+CR+  +PE
Sbjct: 78  LTDPEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCPICRNRFLPE 135


>ref|NP_192875.1| E3 ubiquitin-protein ligase RHA1B [Arabidopsis thaliana]
           gi|51316539|sp|Q9SUS5.1|RHA1B_ARATH RecName: Full=E3
           ubiquitin-protein ligase RHA1B; AltName: Full=RING-H2
           zinc finger protein RHA1b gi|5596482|emb|CAB51420.1|
           RING-H2 finger protein RHA1b [Arabidopsis thaliana]
           gi|7267835|emb|CAB81237.1| RING-H2 finger protein RHA1b
           [Arabidopsis thaliana] gi|17529018|gb|AAL38719.1|
           putative RING-H2 finger protein RHA1b [Arabidopsis
           thaliana] gi|21436175|gb|AAM51375.1| putative RING-H2
           finger protein RHA1b [Arabidopsis thaliana]
           gi|66865942|gb|AAY57605.1| RING finger family protein
           [Arabidopsis thaliana] gi|332657601|gb|AEE83001.1| E3
           ubiquitin-protein ligase RHA1B [Arabidopsis thaliana]
          Length = 157

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = -2

Query: 186 ISDSEYCCTICLSEFARGDEAAELVDCRHVFHRRCLERWL-RCHRATCPLCRSVVVPE 16
           ++D E CCT+CLS+F   D+  +L  C HVFH RCL+RW+  C++ TCP+CR+  +PE
Sbjct: 78  LTDPEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCPICRNRFLPE 135


>ref|XP_002298018.1| predicted protein [Populus trichocarpa] gi|222845276|gb|EEE82823.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 31/81 (38%), Positives = 46/81 (56%)
 Frame = -2

Query: 246 HTTSTYKYASIINTKTSNFAISDSEYCCTICLSEFARGDEAAELVDCRHVFHRRCLERWL 67
           H+ S      I+     +  +  S  CC +CL EF   DE   L +CRH+FH+ CL+RW+
Sbjct: 66  HSVSALLIREILPVVKFSELVDPSADCCAVCLYEFKEVDEIRRLANCRHIFHKCCLDRWM 125

Query: 66  RCHRATCPLCRSVVVPEAVVE 4
              + TCPLCR+ V+P+ + E
Sbjct: 126 GYDQITCPLCRTPVIPDDMQE 146


>ref|XP_002872579.1| ring-H2 finger protein RHA1b [Arabidopsis lyrata subsp. lyrata]
           gi|297318416|gb|EFH48838.1| ring-H2 finger protein RHA1b
           [Arabidopsis lyrata subsp. lyrata]
          Length = 157

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = -2

Query: 186 ISDSEYCCTICLSEFARGDEAAELVDCRHVFHRRCLERWL-RCHRATCPLCRSVVVPE 16
           ++D E CCT+CLS+F   D   +L +C HVFH RCL+RW+  C++ TCP+CR+  +PE
Sbjct: 78  LTDPEDCCTVCLSDFNSDDMIRQLPNCGHVFHHRCLDRWIVDCNKMTCPICRNRFLPE 135


>ref|XP_004143977.1| PREDICTED: RING-H2 zinc finger protein RHA1a-like, partial [Cucumis
           sativus]
          Length = 117

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 28/54 (51%), Positives = 36/54 (66%)
 Frame = -2

Query: 180 DSEYCCTICLSEFARGDEAAELVDCRHVFHRRCLERWLRCHRATCPLCRSVVVP 19
           D   CC +CL EF   DE   L +CRH+FHR CL+RW+   + TCPLCR+V +P
Sbjct: 24  DPPDCCAVCLYEFESDDEIRRLANCRHIFHRGCLDRWIGYGQRTCPLCRTVFIP 77