BLASTX nr result

ID: Salvia21_contig00017164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00017164
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein S...    58   7e-07
ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycin...    58   7e-07
ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein S...    58   7e-07
ref|XP_003630137.1| Small nuclear ribonucleoprotein Sm D3 [Medic...    58   7e-07
gb|AFK46353.1| unknown [Lotus japonicus]                               58   9e-07

>ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
           sativus]
          Length = 132

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = -3

Query: 419 RFMVIPDMLKNAPMFKRLEARIKGKGSSL 333
           RFMVIPDMLKNAPMFKRL+ARIKGKG+SL
Sbjct: 71  RFMVIPDMLKNAPMFKRLDARIKGKGASL 99


>ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycine max]
           gi|356525557|ref|XP_003531391.1| PREDICTED: small
           nuclear ribonucleoprotein Sm D3-like [Glycine max]
           gi|255626793|gb|ACU13741.1| unknown [Glycine max]
          Length = 131

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = -3

Query: 419 RFMVIPDMLKNAPMFKRLEARIKGKGSSL 333
           RFMVIPDMLKNAPMFKRL+ARIKGKG+SL
Sbjct: 71  RFMVIPDMLKNAPMFKRLDARIKGKGASL 99


>ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Vitis
           vinifera] gi|297745546|emb|CBI40711.3| unnamed protein
           product [Vitis vinifera]
          Length = 132

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = -3

Query: 419 RFMVIPDMLKNAPMFKRLEARIKGKGSSL 333
           RFMVIPDMLKNAPMFKRL+ARIKGKGS+L
Sbjct: 71  RFMVIPDMLKNAPMFKRLDARIKGKGSAL 99


>ref|XP_003630137.1| Small nuclear ribonucleoprotein Sm D3 [Medicago truncatula]
           gi|355524159|gb|AET04613.1| Small nuclear
           ribonucleoprotein Sm D3 [Medicago truncatula]
           gi|388503694|gb|AFK39913.1| unknown [Medicago
           truncatula]
          Length = 131

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = -3

Query: 419 RFMVIPDMLKNAPMFKRLEARIKGKGSSL 333
           RFMVIPDMLKNAPMFKRL+ARIKGKG+SL
Sbjct: 71  RFMVIPDMLKNAPMFKRLDARIKGKGASL 99


>gb|AFK46353.1| unknown [Lotus japonicus]
          Length = 132

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = -3

Query: 419 RFMVIPDMLKNAPMFKRLEARIKGKGSSL 333
           RFMVIPDMLKNAPMFKRL+AR+KGKG+SL
Sbjct: 71  RFMVIPDMLKNAPMFKRLDARVKGKGASL 99


Top