BLASTX nr result

ID: Salvia21_contig00017077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00017077
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268231.1| PREDICTED: uncharacterized protein C57A7.06 ...    73   3e-11
ref|XP_002871350.1| U3 ribonucleoprotein family protein [Arabido...    72   4e-11
ref|XP_002523095.1| U3 small nucleolar RNA-associated protein, p...    66   3e-09
ref|NP_196477.1| U3 ribonucleoprotein (Utp) family protein [Arab...    59   3e-07
gb|AAC19284.1| T14P8.20 [Arabidopsis thaliana] gi|7269000|emb|CA...    58   7e-07

>ref|XP_002268231.1| PREDICTED: uncharacterized protein C57A7.06 [Vitis vinifera]
           gi|297743903|emb|CBI36873.3| unnamed protein product
           [Vitis vinifera]
          Length = 895

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 47/125 (37%), Positives = 63/125 (50%), Gaps = 20/125 (16%)
 Frame = +1

Query: 4   LKKELEHLNPTLNGEASDGDEEIDSDGA--VGNDXXXXXXXXXXXXSTRNRRYDPVENYE 177
           L+KEL+ +NP  N     GDEEI+SD    + N+            S +NRR+D VEN+E
Sbjct: 41  LRKELDLVNP--NPLKGGGDEEINSDEGELLANNLYEYEEAAAEEESKKNRRFDSVENFE 98

Query: 178 FELPEDFEDWKVA------------------SXXXXXXXXXXXPGRHARMLEEITGLPAD 303
           +ELPEDF+D  +A                  S            GRH RML+ ITG+P++
Sbjct: 99  YELPEDFKDENIASDDDDIEGEDEENNRSENSSHLGDEVEEEDDGRHMRMLQGITGMPSE 158

Query: 304 AFGGK 318
           AF GK
Sbjct: 159 AFEGK 163


>ref|XP_002871350.1| U3 ribonucleoprotein family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297317187|gb|EFH47609.1| U3 ribonucleoprotein
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 774

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/89 (44%), Positives = 51/89 (57%)
 Frame = +1

Query: 49  ASDGDEEIDSDGAVGNDXXXXXXXXXXXXSTRNRRYDPVENYEFELPEDFEDWKVASXXX 228
           + +GD+EIDSD   G+D            S +N+RYD V+NYEFELP+DFED  V S   
Sbjct: 41  SDEGDDEIDSD--YGDDLYEYEEGVPEEESRKNKRYDRVDNYEFELPQDFEDENVES--- 95

Query: 229 XXXXXXXXPGRHARMLEEITGLPADAFGG 315
                     RH RML+++TGLP  AF G
Sbjct: 96  ----EDDDDDRHTRMLKDVTGLPTAAFQG 120


>ref|XP_002523095.1| U3 small nucleolar RNA-associated protein, putative [Ricinus
           communis] gi|223537657|gb|EEF39280.1| U3 small nucleolar
           RNA-associated protein, putative [Ricinus communis]
          Length = 900

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 44/132 (33%), Positives = 58/132 (43%), Gaps = 26/132 (19%)
 Frame = +1

Query: 1   ALKKELEHLNPTLNGEASDGDEEIDSDGAVGNDXXXXXXXXXXXXSTRNRRYDPVENYEF 180
           AL++EL+ +NP         DE+I SD  V +D            S +NRRYDPVENYE+
Sbjct: 47  ALRRELDRINPK-------EDEDILSDEEVNDDVYEYEEGLAEEESKKNRRYDPVENYEY 99

Query: 181 ELPEDFEDWKVAS--------------------------XXXXXXXXXXXPGRHARMLEE 282
           +LP++F+D  V S                                       RH RML+ 
Sbjct: 100 QLPKEFKDENVQSDDDDDDDDLDNDYRTKGSNVKRKKLDRLDDDEVDEEDDERHLRMLQG 159

Query: 283 ITGLPADAFGGK 318
           ITG+P  AF GK
Sbjct: 160 ITGMPTQAFDGK 171


>ref|NP_196477.1| U3 ribonucleoprotein (Utp) family protein [Arabidopsis thaliana]
           gi|9759354|dbj|BAB10009.1| unnamed protein product
           [Arabidopsis thaliana] gi|110741584|dbj|BAE98740.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332003944|gb|AED91327.1| U3 ribonucleoprotein (Utp)
           family protein [Arabidopsis thaliana]
          Length = 822

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/90 (41%), Positives = 46/90 (51%)
 Frame = +1

Query: 49  ASDGDEEIDSDGAVGNDXXXXXXXXXXXXSTRNRRYDPVENYEFELPEDFEDWKVASXXX 228
           + +GD+EIDS  A G D            S +N RY+ V NYEFEL ED ED  V S   
Sbjct: 43  SDEGDDEIDS--AYG-DFYEYEEGVPEEESRKNNRYERVVNYEFELAEDCEDENVESEDD 99

Query: 229 XXXXXXXXPGRHARMLEEITGLPADAFGGK 318
                     RH+RML+ +T LP  AF G+
Sbjct: 100 DDDDDDDDDDRHSRMLKNVTELPISAFQGE 129


>gb|AAC19284.1| T14P8.20 [Arabidopsis thaliana] gi|7269000|emb|CAB80733.1|
           AT4g02400 [Arabidopsis thaliana]
          Length = 870

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
 Frame = +1

Query: 49  ASDGDEEIDSDGAVGNDXXXXXXXXXXXXSTRNRRYDPVENYEFELPEDFEDWKVAS--- 219
           + + D+EIDSD     D            S +N RYD V+NY++ELPEDFED  V S   
Sbjct: 40  SDEDDDEIDSDDE-NVDLYEYEEGVPEEESKKNNRYDRVDNYDYELPEDFEDENVESDDD 98

Query: 220 ---XXXXXXXXXXXPGRHARMLEEITGLPADAF 309
                           RH RML+ +TG+P+ AF
Sbjct: 99  EDGGNSENEEGEGDDDRHTRMLQGLTGMPSAAF 131


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