BLASTX nr result

ID: Salvia21_contig00017050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00017050
         (1375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-l...   316   1e-83
ref|XP_002321194.1| predicted protein [Populus trichocarpa] gi|2...   314   3e-83
ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [...   313   7e-83
ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp....   313   9e-83
ref|NP_566318.1| 3'-5'-exoribonuclease family protein [Arabidops...   312   1e-82

>ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
          Length = 286

 Score =  316 bits (809), Expect = 1e-83
 Identities = 157/194 (80%), Positives = 178/194 (91%)
 Frame = +3

Query: 519  QGRGGEELSTELSSALQRCLLGGKSGAGAGIDLSSLCIVRGKVCWDLYIDGLVVSSDGNV 698
            +GRGG+EL+ ELS+ALQRCLLGGKSGAGAGIDLSSL +V GK+CWDLYIDGLVVSSDGN+
Sbjct: 92   EGRGGDELAAELSNALQRCLLGGKSGAGAGIDLSSLIVVEGKICWDLYIDGLVVSSDGNL 151

Query: 699  LDAFGAAIKAALSDTAIPKVQVSANAPSDEQPEVDVSDEEFVQFDTSGVPVIVTLTKVGG 878
            LDA GAAIKAALS+T IP+VQV+A   +DE PEVDVSDEEF+QFDTS VPVIVTLTKVG 
Sbjct: 152  LDALGAAIKAALSNTGIPRVQVAAGTSNDEHPEVDVSDEEFLQFDTSRVPVIVTLTKVGR 211

Query: 879  HYIVDATTEEESQMSSAVSVSINRLGRICGLTKRGGAGLDPTVILDMISAAKHVSEQLMN 1058
            HYIVDAT+EEESQMSSAVS+S+NR G ICG+TKRGG GLDP++ILDMIS AKHVSEQL+N
Sbjct: 212  HYIVDATSEEESQMSSAVSISVNRQGHICGITKRGGVGLDPSIILDMISVAKHVSEQLIN 271

Query: 1059 KLDSEIAAAEACDE 1100
            KLDSEIA+AEA +E
Sbjct: 272  KLDSEIASAEAEEE 285


>ref|XP_002321194.1| predicted protein [Populus trichocarpa] gi|222861967|gb|EEE99509.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  314 bits (805), Expect = 3e-83
 Identities = 157/194 (80%), Positives = 178/194 (91%)
 Frame = +3

Query: 519  QGRGGEELSTELSSALQRCLLGGKSGAGAGIDLSSLCIVRGKVCWDLYIDGLVVSSDGNV 698
            +GRGGEELS ELS ALQRCLLGGKSGAGAGIDLSSL +  GK+CWDLYIDGLV+SSDGN+
Sbjct: 92   EGRGGEELSAELSVALQRCLLGGKSGAGAGIDLSSLIVAEGKICWDLYIDGLVISSDGNL 151

Query: 699  LDAFGAAIKAALSDTAIPKVQVSANAPSDEQPEVDVSDEEFVQFDTSGVPVIVTLTKVGG 878
            LDA GAAIKAALS+T IP+VQV+A A  DEQPEVD+SDEEF+QFDTSGVPVIVTLTKVG 
Sbjct: 152  LDALGAAIKAALSNTGIPRVQVAAGASGDEQPEVDISDEEFMQFDTSGVPVIVTLTKVGR 211

Query: 879  HYIVDATTEEESQMSSAVSVSINRLGRICGLTKRGGAGLDPTVILDMISAAKHVSEQLMN 1058
            HYIVDAT+EEESQMSSAVSVSI+R G+ICGL+KRG AGLDP+VI DMIS A+H+SEQL+N
Sbjct: 212  HYIVDATSEEESQMSSAVSVSISRKGQICGLSKRGSAGLDPSVISDMISVARHISEQLIN 271

Query: 1059 KLDSEIAAAEACDE 1100
            KLDSEI+AAEA ++
Sbjct: 272  KLDSEISAAEADED 285


>ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [Vitis vinifera]
            gi|296082105|emb|CBI21110.3| unnamed protein product
            [Vitis vinifera]
          Length = 287

 Score =  313 bits (802), Expect = 7e-83
 Identities = 159/194 (81%), Positives = 175/194 (90%)
 Frame = +3

Query: 519  QGRGGEELSTELSSALQRCLLGGKSGAGAGIDLSSLCIVRGKVCWDLYIDGLVVSSDGNV 698
            +GRGGEELSTELS ALQ CLLGGKSGAGAGIDLSSL +V GKVCWDLYIDGLVVSSDGN+
Sbjct: 92   EGRGGEELSTELSGALQHCLLGGKSGAGAGIDLSSLVVVEGKVCWDLYIDGLVVSSDGNL 151

Query: 699  LDAFGAAIKAALSDTAIPKVQVSANAPSDEQPEVDVSDEEFVQFDTSGVPVIVTLTKVGG 878
            LDA GAAIKAAL++T IPKV+V+  A  D  PEVD+SD+E++QFDTSGVPVIVTLTKVG 
Sbjct: 152  LDALGAAIKAALTNTGIPKVEVAVGASGDGLPEVDISDDEYLQFDTSGVPVIVTLTKVGR 211

Query: 879  HYIVDATTEEESQMSSAVSVSINRLGRICGLTKRGGAGLDPTVILDMISAAKHVSEQLMN 1058
            HYIVDAT EEESQMSSAVSVS++  GRICGL KRGGAGLDP+VILDMIS AKHVSEQLMN
Sbjct: 212  HYIVDATLEEESQMSSAVSVSVSGQGRICGLIKRGGAGLDPSVILDMISVAKHVSEQLMN 271

Query: 1059 KLDSEIAAAEACDE 1100
            KLDSEI+AAEA +E
Sbjct: 272  KLDSEISAAEAFEE 285



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = +3

Query: 168 LQAELGKPNPSYPDKGKVSIYVDCSPTAEPSFE 266
           ++AELGKP+PS PDKGKV+IYVDCSPTA P FE
Sbjct: 60  VKAELGKPSPSQPDKGKVNIYVDCSPTAAPMFE 92


>ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328387|gb|EFH58806.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 287

 Score =  313 bits (801), Expect = 9e-83
 Identities = 156/193 (80%), Positives = 175/193 (90%)
 Frame = +3

Query: 522  GRGGEELSTELSSALQRCLLGGKSGAGAGIDLSSLCIVRGKVCWDLYIDGLVVSSDGNVL 701
            GRGGEELS+EL+ ALQRCLLGGKSGAGAGI+LSSL I  GKVCWDLYIDGLV+SSDGN+L
Sbjct: 93   GRGGEELSSELALALQRCLLGGKSGAGAGINLSSLLIKEGKVCWDLYIDGLVISSDGNLL 152

Query: 702  DAFGAAIKAALSDTAIPKVQVSANAPSDEQPEVDVSDEEFVQFDTSGVPVIVTLTKVGGH 881
            DA GAAIKAAL++TAIPKV VSA    DEQPE+D+SDEE++QFDTS VPVIVTLTKVG H
Sbjct: 153  DALGAAIKAALTNTAIPKVNVSAEVADDEQPEIDISDEEYLQFDTSSVPVIVTLTKVGTH 212

Query: 882  YIVDATTEEESQMSSAVSVSINRLGRICGLTKRGGAGLDPTVILDMISAAKHVSEQLMNK 1061
            YIVDAT EEESQMSSAVS+S+NR G ICGLTKRGG+GLDP+VILDMIS AKHV+E LM+K
Sbjct: 213  YIVDATAEEESQMSSAVSISVNRAGHICGLTKRGGSGLDPSVILDMISVAKHVTENLMSK 272

Query: 1062 LDSEIAAAEACDE 1100
            LDSEI+AAEA D+
Sbjct: 273  LDSEISAAEAADD 285


>ref|NP_566318.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana]
            gi|30680427|ref|NP_850537.1| 3'-5'-exoribonuclease family
            protein [Arabidopsis thaliana]
            gi|11762184|gb|AAG40370.1|AF325018_1 AT3g07750
            [Arabidopsis thaliana] gi|26453010|dbj|BAC43581.1|
            putative 3' exoribonuclease [Arabidopsis thaliana]
            gi|56744222|gb|AAW28551.1| At3g07750 [Arabidopsis
            thaliana] gi|332641077|gb|AEE74598.1|
            3'-5'-exoribonuclease family protein [Arabidopsis
            thaliana] gi|332641078|gb|AEE74599.1|
            3'-5'-exoribonuclease family protein [Arabidopsis
            thaliana]
          Length = 286

 Score =  312 bits (799), Expect = 1e-82
 Identities = 155/193 (80%), Positives = 175/193 (90%)
 Frame = +3

Query: 522  GRGGEELSTELSSALQRCLLGGKSGAGAGIDLSSLCIVRGKVCWDLYIDGLVVSSDGNVL 701
            GRGGEELS+EL+ ALQRCLLGGKSGAGAGI+LSSL I  GKVCWDLYIDGLV+SSDGN+L
Sbjct: 92   GRGGEELSSELALALQRCLLGGKSGAGAGINLSSLLIKEGKVCWDLYIDGLVISSDGNLL 151

Query: 702  DAFGAAIKAALSDTAIPKVQVSANAPSDEQPEVDVSDEEFVQFDTSGVPVIVTLTKVGGH 881
            DA GAAIKAAL++TAIPKV VSA    DEQPE+D+SDEE++QFDTS VPVIVTLTKVG H
Sbjct: 152  DALGAAIKAALTNTAIPKVNVSAEVADDEQPEIDISDEEYLQFDTSSVPVIVTLTKVGTH 211

Query: 882  YIVDATTEEESQMSSAVSVSINRLGRICGLTKRGGAGLDPTVILDMISAAKHVSEQLMNK 1061
            YIVDAT EEESQMSSAVS+S+NR G ICGLTKR G+GLDP+VILDMIS AKHV+E LM+K
Sbjct: 212  YIVDATAEEESQMSSAVSISVNRTGHICGLTKRSGSGLDPSVILDMISVAKHVTETLMSK 271

Query: 1062 LDSEIAAAEACDE 1100
            LDSEI+AAEAC++
Sbjct: 272  LDSEISAAEACED 284


Top