BLASTX nr result
ID: Salvia21_contig00016980
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Salvia21_contig00016980
(917 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 379 e-103
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 377 e-102
ref|XP_002530618.1| TFIIH basal transcription factor complex sub... 335 1e-89
ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group] g... 306 3e-81
ref|NP_175971.3| transcription initiation factor TFIIH subunit H... 305 1e-80
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
protein product [Vitis vinifera]
Length = 602
Score = 379 bits (972), Expect = e-103
Identities = 190/306 (62%), Positives = 239/306 (78%), Gaps = 1/306 (0%)
Frame = -1
Query: 917 SRRPKQRLALKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLKFVPHKM 741
SR KQR+ K+ M S +KPL+DG++NRVTFNLTPEIIHQIFAEKPAV QA+L FVP+KM
Sbjct: 172 SRTSKQRVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKM 231
Query: 740 SEKEFWTKYSRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVD 561
+EK+FW KY RA+YLH TRN V AVFLK DD+LANEARRKIRRVDPT+D
Sbjct: 232 TEKDFWNKYCRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLD 291
Query: 560 IEADEGDDYTHLPDHGLVRDEAKDVLDSQYEPYRRSFSQDLNQHSAVVLQGRVVDVELSD 381
+EAD+GDDY HLPDHG+ RD +K+++D QYE YRR+ SQDLN+H+AVVL+GR +DVEL D
Sbjct: 292 MEADQGDDYMHLPDHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELED 351
Query: 380 TRSVAEALSRKKQAELSDDKSNTNLEKDLSNRISRSAEIEDLQGPRDPAVAPLSIKDPRD 201
TR+VAEAL++ K+ E +++KS+ ++ ++ RISR EIEDLQ PRD A L IKDPRD
Sbjct: 352 TRTVAEALAKSKRVEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRD 411
Query: 200 YFDSQQANALKALGDTGSTTKPFISSVSAGQAYDSLRNVVIDIKEMGLNEPIMNQEVALK 21
YFDSQQANALK LGDT + +K S+S +AY SLR + +IK +GL++PI+ ++ALK
Sbjct: 412 YFDSQQANALKTLGDTLAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALK 471
Query: 20 VLTGLT 3
VL GLT
Sbjct: 472 VLNGLT 477
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 377 bits (968), Expect = e-102
Identities = 189/306 (61%), Positives = 240/306 (78%), Gaps = 1/306 (0%)
Frame = -1
Query: 917 SRRPKQRLALKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLKFVPHKM 741
SR KQR+ K+ M S +KPL+DG++NRVTFNLTPEIIHQIFAEKPAV QA+L FVP+KM
Sbjct: 215 SRTSKQRVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKM 274
Query: 740 SEKEFWTKYSRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVD 561
+EK+FW KY RA+YLH TRN V AVFLK DD+LA+EARRKIRRVDPT+D
Sbjct: 275 TEKDFWNKYCRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTLD 334
Query: 560 IEADEGDDYTHLPDHGLVRDEAKDVLDSQYEPYRRSFSQDLNQHSAVVLQGRVVDVELSD 381
+EAD+GDDY HLPDHG+ RD +K+++D QYE YRR+ SQDLN+H+AVVL+GR +DVEL D
Sbjct: 335 MEADQGDDYMHLPDHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELED 394
Query: 380 TRSVAEALSRKKQAELSDDKSNTNLEKDLSNRISRSAEIEDLQGPRDPAVAPLSIKDPRD 201
TR+VAEAL++ K+ E +++KS+ ++ ++ RISR EIEDLQ PRD A L IKDPRD
Sbjct: 395 TRTVAEALAKSKRVEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRD 454
Query: 200 YFDSQQANALKALGDTGSTTKPFISSVSAGQAYDSLRNVVIDIKEMGLNEPIMNQEVALK 21
YFDSQQANALK LGDT + +K S+S+ +AY SLR + +IK +GL++PI+ ++ALK
Sbjct: 455 YFDSQQANALKTLGDTLAGSKQIKCSLSSQEAYGSLRGFISEIKSVGLSDPIVKPDIALK 514
Query: 20 VLTGLT 3
VL GLT
Sbjct: 515 VLNGLT 520
>ref|XP_002530618.1| TFIIH basal transcription factor complex subunit, putative [Ricinus
communis] gi|223529828|gb|EEF31761.1| TFIIH basal
transcription factor complex subunit, putative [Ricinus
communis]
Length = 597
Score = 335 bits (858), Expect = 1e-89
Identities = 176/308 (57%), Positives = 232/308 (75%), Gaps = 3/308 (0%)
Frame = -1
Query: 917 SRRPKQRLALKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLKFVPHKM 741
SR+ KQR+ LK+ M + KPL DGQ+N+VTFNLTPEI+ +IFAEKPAV QAYL VP+KM
Sbjct: 167 SRKSKQRVGLKSVMLADSKPLIDGQTNKVTFNLTPEIVREIFAEKPAVHQAYLSLVPNKM 226
Query: 740 SEKEFWTKYSRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVD 561
SE++FWTKY RA+YL +RN+ A+FLK DD+LA+E R+KIR VDPT+D
Sbjct: 227 SERDFWTKYCRAEYLQRSRNIHAAAAEAAEDEELALFLKPDDILASETRQKIRCVDPTLD 286
Query: 560 IEADEGDDYTHLPDHGLVRDEAKDVLDSQYEPYRRSFSQDLNQHSAVVLQGRVVDVE-LS 384
+EAD+GDDYTHLPDHG+VRD +KDV++SQ+EPYRR+ QDLN+H+AVVL+G +D E L
Sbjct: 287 MEADQGDDYTHLPDHGIVRDGSKDVIESQHEPYRRTLLQDLNRHAAVVLEGTAIDDEQLQ 346
Query: 383 DTRSVAEALSRKKQA-ELSDDKSNTNLEKDLSNRISRSAEIEDLQGPRDPAVAPLSIKDP 207
DT++VA+AL+R K+ + + +++ N ++ SNRIS+ EIEDLQG D +APL IKDP
Sbjct: 347 DTKAVADALARSKRGIKTINREADGNANQERSNRISQMMEIEDLQGSNDHHLAPLCIKDP 406
Query: 206 RDYFDSQQANALKALGDTGSTTKPFISSVSAGQAYDSLRNVVIDIKEMGLNEPIMNQEVA 27
RDYFDSQQA+ALK D S T+ S+S+ +AY SLR+ + K MGLN+PI+ E+A
Sbjct: 407 RDYFDSQQASALKNSRDIPSGTEAARCSLSSQEAYASLRDSITQTKAMGLNDPIVKPEIA 466
Query: 26 LKVLTGLT 3
KVL+ LT
Sbjct: 467 TKVLSILT 474
>ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group]
gi|38636938|dbj|BAD03200.1| unknown protein [Oryza sativa
Japonica Group] gi|113623552|dbj|BAF23497.1| Os08g0338200
[Oryza sativa Japonica Group]
gi|215686948|dbj|BAG90767.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 604
Score = 306 bits (785), Expect = 3e-81
Identities = 164/305 (53%), Positives = 213/305 (69%), Gaps = 5/305 (1%)
Frame = -1
Query: 905 KQRLALKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLKFVPHKMSEKE 729
KQR K+ M + V+P +DG++N+VTF+LT EIIHQIFAEKPAV +A+L FVP KMSEK+
Sbjct: 181 KQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKKMSEKD 240
Query: 728 FWTKYSRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEAD 549
FWTKY RA+YL T+N V A+FLK DD+LA EAR KI+RVDPT+D+EAD
Sbjct: 241 FWTKYFRAEYLLRTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTLDMEAD 300
Query: 548 EGDDYTHLPDHGLVRDEAKDVLDSQYEPYRRSFSQDLNQHSAVVLQGRVVDVELSDTRSV 369
GDDY HLPDHG++RD +K+ +D+ E RR+ SQDLN+H+AVVL+GR DVEL+DT++V
Sbjct: 301 AGDDYIHLPDHGIIRDGSKETIDNDGELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTV 360
Query: 368 AEALSRKKQ----AELSDDKSNTNLEKDLSNRISRSAEIEDLQGPRDPAVAPLSIKDPRD 201
AEA++R K+ + +SDD ++ L K ++R EIEDLQ PR APL IKDPR+
Sbjct: 361 AEAIARSKKEPPSSSISDDTNHERLVK-----VARMTEIEDLQAPRSLPYAPLCIKDPRE 415
Query: 200 YFDSQQANALKALGDTGSTTKPFISSVSAGQAYDSLRNVVIDIKEMGLNEPIMNQEVALK 21
YFDSQQANAL++LG +S A+D L + IK GLN P++ +VALK
Sbjct: 416 YFDSQQANALRSLGGNNDGRHARNCRLSTDDAFDHLLGQISSIKVNGLNYPVIQSDVALK 475
Query: 20 VLTGL 6
VL L
Sbjct: 476 VLNEL 480
>ref|NP_175971.3| transcription initiation factor TFIIH subunit H1 [Arabidopsis
thaliana] gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
Full=Probable RNA polymerase II transcription factor B
subunit 1-1; AltName: Full=General transcription and DNA
repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
hypothetical protein [Arabidopsis thaliana]
gi|332195172|gb|AEE33293.1| transcription initiation
factor TFIIH subunit H1 [Arabidopsis thaliana]
Length = 591
Score = 305 bits (781), Expect = 1e-80
Identities = 157/305 (51%), Positives = 215/305 (70%), Gaps = 1/305 (0%)
Frame = -1
Query: 914 RRPKQRLALKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLKFVPHKMS 738
R+ KQ+L LK+ M S +KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++ +VP KM+
Sbjct: 168 RKSKQQLGLKSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMT 227
Query: 737 EKEFWTKYSRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDI 558
EK+FWTKY RA+YL+ST+N AVFLK D++LA E R KIRRVDPT+D+
Sbjct: 228 EKDFWTKYFRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRHKIRRVDPTLDM 287
Query: 557 EADEGDDYTHLPDHGLVRDEAKDVLDSQYEPYRRSFSQDLNQHSAVVLQGRVVDVELSDT 378
EAD+GDDYTHL DHG+ RD DV++ Q + ++RS QDLN+H+AVVL+GR +DVE DT
Sbjct: 288 EADQGDDYTHLMDHGIQRDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVESEDT 347
Query: 377 RSVAEALSRKKQAELSDDKSNTNLEKDLSNRISRSAEIEDLQGPRDPAVAPLSIKDPRDY 198
R VAEAL+R KQ +D ++ + ++ R+SR A +EDLQ P++ +APLSIKDPRDY
Sbjct: 348 RIVAEALTRVKQVSKADGETTKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDY 407
Query: 197 FDSQQANALKALGDTGSTTKPFISSVSAGQAYDSLRNVVIDIKEMGLNEPIMNQEVALKV 18
F+SQQ N L + + +AY L+ +++I+ GL++P++ EV+ +V
Sbjct: 408 FESQQGNVLNVPRGAKGLKR------NVHEAYGLLKESILEIRATGLSDPLIKPEVSFEV 461
Query: 17 LTGLT 3
+ LT
Sbjct: 462 FSSLT 466