BLASTX nr result
ID: Salvia21_contig00016980
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Salvia21_contig00016980 (917 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 379 e-103 emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 377 e-102 ref|XP_002530618.1| TFIIH basal transcription factor complex sub... 335 1e-89 ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group] g... 306 3e-81 ref|NP_175971.3| transcription initiation factor TFIIH subunit H... 305 1e-80 >ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed protein product [Vitis vinifera] Length = 602 Score = 379 bits (972), Expect = e-103 Identities = 190/306 (62%), Positives = 239/306 (78%), Gaps = 1/306 (0%) Frame = -1 Query: 917 SRRPKQRLALKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLKFVPHKM 741 SR KQR+ K+ M S +KPL+DG++NRVTFNLTPEIIHQIFAEKPAV QA+L FVP+KM Sbjct: 172 SRTSKQRVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKM 231 Query: 740 SEKEFWTKYSRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVD 561 +EK+FW KY RA+YLH TRN V AVFLK DD+LANEARRKIRRVDPT+D Sbjct: 232 TEKDFWNKYCRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLD 291 Query: 560 IEADEGDDYTHLPDHGLVRDEAKDVLDSQYEPYRRSFSQDLNQHSAVVLQGRVVDVELSD 381 +EAD+GDDY HLPDHG+ RD +K+++D QYE YRR+ SQDLN+H+AVVL+GR +DVEL D Sbjct: 292 MEADQGDDYMHLPDHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELED 351 Query: 380 TRSVAEALSRKKQAELSDDKSNTNLEKDLSNRISRSAEIEDLQGPRDPAVAPLSIKDPRD 201 TR+VAEAL++ K+ E +++KS+ ++ ++ RISR EIEDLQ PRD A L IKDPRD Sbjct: 352 TRTVAEALAKSKRVEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRD 411 Query: 200 YFDSQQANALKALGDTGSTTKPFISSVSAGQAYDSLRNVVIDIKEMGLNEPIMNQEVALK 21 YFDSQQANALK LGDT + +K S+S +AY SLR + +IK +GL++PI+ ++ALK Sbjct: 412 YFDSQQANALKTLGDTLAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALK 471 Query: 20 VLTGLT 3 VL GLT Sbjct: 472 VLNGLT 477 >emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] Length = 735 Score = 377 bits (968), Expect = e-102 Identities = 189/306 (61%), Positives = 240/306 (78%), Gaps = 1/306 (0%) Frame = -1 Query: 917 SRRPKQRLALKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLKFVPHKM 741 SR KQR+ K+ M S +KPL+DG++NRVTFNLTPEIIHQIFAEKPAV QA+L FVP+KM Sbjct: 215 SRTSKQRVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKM 274 Query: 740 SEKEFWTKYSRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVD 561 +EK+FW KY RA+YLH TRN V AVFLK DD+LA+EARRKIRRVDPT+D Sbjct: 275 TEKDFWNKYCRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTLD 334 Query: 560 IEADEGDDYTHLPDHGLVRDEAKDVLDSQYEPYRRSFSQDLNQHSAVVLQGRVVDVELSD 381 +EAD+GDDY HLPDHG+ RD +K+++D QYE YRR+ SQDLN+H+AVVL+GR +DVEL D Sbjct: 335 MEADQGDDYMHLPDHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELED 394 Query: 380 TRSVAEALSRKKQAELSDDKSNTNLEKDLSNRISRSAEIEDLQGPRDPAVAPLSIKDPRD 201 TR+VAEAL++ K+ E +++KS+ ++ ++ RISR EIEDLQ PRD A L IKDPRD Sbjct: 395 TRTVAEALAKSKRVEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRD 454 Query: 200 YFDSQQANALKALGDTGSTTKPFISSVSAGQAYDSLRNVVIDIKEMGLNEPIMNQEVALK 21 YFDSQQANALK LGDT + +K S+S+ +AY SLR + +IK +GL++PI+ ++ALK Sbjct: 455 YFDSQQANALKTLGDTLAGSKQIKCSLSSQEAYGSLRGFISEIKSVGLSDPIVKPDIALK 514 Query: 20 VLTGLT 3 VL GLT Sbjct: 515 VLNGLT 520 >ref|XP_002530618.1| TFIIH basal transcription factor complex subunit, putative [Ricinus communis] gi|223529828|gb|EEF31761.1| TFIIH basal transcription factor complex subunit, putative [Ricinus communis] Length = 597 Score = 335 bits (858), Expect = 1e-89 Identities = 176/308 (57%), Positives = 232/308 (75%), Gaps = 3/308 (0%) Frame = -1 Query: 917 SRRPKQRLALKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLKFVPHKM 741 SR+ KQR+ LK+ M + KPL DGQ+N+VTFNLTPEI+ +IFAEKPAV QAYL VP+KM Sbjct: 167 SRKSKQRVGLKSVMLADSKPLIDGQTNKVTFNLTPEIVREIFAEKPAVHQAYLSLVPNKM 226 Query: 740 SEKEFWTKYSRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVD 561 SE++FWTKY RA+YL +RN+ A+FLK DD+LA+E R+KIR VDPT+D Sbjct: 227 SERDFWTKYCRAEYLQRSRNIHAAAAEAAEDEELALFLKPDDILASETRQKIRCVDPTLD 286 Query: 560 IEADEGDDYTHLPDHGLVRDEAKDVLDSQYEPYRRSFSQDLNQHSAVVLQGRVVDVE-LS 384 +EAD+GDDYTHLPDHG+VRD +KDV++SQ+EPYRR+ QDLN+H+AVVL+G +D E L Sbjct: 287 MEADQGDDYTHLPDHGIVRDGSKDVIESQHEPYRRTLLQDLNRHAAVVLEGTAIDDEQLQ 346 Query: 383 DTRSVAEALSRKKQA-ELSDDKSNTNLEKDLSNRISRSAEIEDLQGPRDPAVAPLSIKDP 207 DT++VA+AL+R K+ + + +++ N ++ SNRIS+ EIEDLQG D +APL IKDP Sbjct: 347 DTKAVADALARSKRGIKTINREADGNANQERSNRISQMMEIEDLQGSNDHHLAPLCIKDP 406 Query: 206 RDYFDSQQANALKALGDTGSTTKPFISSVSAGQAYDSLRNVVIDIKEMGLNEPIMNQEVA 27 RDYFDSQQA+ALK D S T+ S+S+ +AY SLR+ + K MGLN+PI+ E+A Sbjct: 407 RDYFDSQQASALKNSRDIPSGTEAARCSLSSQEAYASLRDSITQTKAMGLNDPIVKPEIA 466 Query: 26 LKVLTGLT 3 KVL+ LT Sbjct: 467 TKVLSILT 474 >ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group] gi|38636938|dbj|BAD03200.1| unknown protein [Oryza sativa Japonica Group] gi|113623552|dbj|BAF23497.1| Os08g0338200 [Oryza sativa Japonica Group] gi|215686948|dbj|BAG90767.1| unnamed protein product [Oryza sativa Japonica Group] Length = 604 Score = 306 bits (785), Expect = 3e-81 Identities = 164/305 (53%), Positives = 213/305 (69%), Gaps = 5/305 (1%) Frame = -1 Query: 905 KQRLALKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLKFVPHKMSEKE 729 KQR K+ M + V+P +DG++N+VTF+LT EIIHQIFAEKPAV +A+L FVP KMSEK+ Sbjct: 181 KQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKKMSEKD 240 Query: 728 FWTKYSRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEAD 549 FWTKY RA+YL T+N V A+FLK DD+LA EAR KI+RVDPT+D+EAD Sbjct: 241 FWTKYFRAEYLLRTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTLDMEAD 300 Query: 548 EGDDYTHLPDHGLVRDEAKDVLDSQYEPYRRSFSQDLNQHSAVVLQGRVVDVELSDTRSV 369 GDDY HLPDHG++RD +K+ +D+ E RR+ SQDLN+H+AVVL+GR DVEL+DT++V Sbjct: 301 AGDDYIHLPDHGIIRDGSKETIDNDGELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTV 360 Query: 368 AEALSRKKQ----AELSDDKSNTNLEKDLSNRISRSAEIEDLQGPRDPAVAPLSIKDPRD 201 AEA++R K+ + +SDD ++ L K ++R EIEDLQ PR APL IKDPR+ Sbjct: 361 AEAIARSKKEPPSSSISDDTNHERLVK-----VARMTEIEDLQAPRSLPYAPLCIKDPRE 415 Query: 200 YFDSQQANALKALGDTGSTTKPFISSVSAGQAYDSLRNVVIDIKEMGLNEPIMNQEVALK 21 YFDSQQANAL++LG +S A+D L + IK GLN P++ +VALK Sbjct: 416 YFDSQQANALRSLGGNNDGRHARNCRLSTDDAFDHLLGQISSIKVNGLNYPVIQSDVALK 475 Query: 20 VLTGL 6 VL L Sbjct: 476 VLNEL 480 >ref|NP_175971.3| transcription initiation factor TFIIH subunit H1 [Arabidopsis thaliana] gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName: Full=Probable RNA polymerase II transcription factor B subunit 1-1; AltName: Full=General transcription and DNA repair factor IIH subunit TFB1-1; Short=AtTFB1-1; Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1| hypothetical protein [Arabidopsis thaliana] gi|332195172|gb|AEE33293.1| transcription initiation factor TFIIH subunit H1 [Arabidopsis thaliana] Length = 591 Score = 305 bits (781), Expect = 1e-80 Identities = 157/305 (51%), Positives = 215/305 (70%), Gaps = 1/305 (0%) Frame = -1 Query: 914 RRPKQRLALKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLKFVPHKMS 738 R+ KQ+L LK+ M S +KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++ +VP KM+ Sbjct: 168 RKSKQQLGLKSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMT 227 Query: 737 EKEFWTKYSRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDI 558 EK+FWTKY RA+YL+ST+N AVFLK D++LA E R KIRRVDPT+D+ Sbjct: 228 EKDFWTKYFRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRHKIRRVDPTLDM 287 Query: 557 EADEGDDYTHLPDHGLVRDEAKDVLDSQYEPYRRSFSQDLNQHSAVVLQGRVVDVELSDT 378 EAD+GDDYTHL DHG+ RD DV++ Q + ++RS QDLN+H+AVVL+GR +DVE DT Sbjct: 288 EADQGDDYTHLMDHGIQRDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVESEDT 347 Query: 377 RSVAEALSRKKQAELSDDKSNTNLEKDLSNRISRSAEIEDLQGPRDPAVAPLSIKDPRDY 198 R VAEAL+R KQ +D ++ + ++ R+SR A +EDLQ P++ +APLSIKDPRDY Sbjct: 348 RIVAEALTRVKQVSKADGETTKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDY 407 Query: 197 FDSQQANALKALGDTGSTTKPFISSVSAGQAYDSLRNVVIDIKEMGLNEPIMNQEVALKV 18 F+SQQ N L + + +AY L+ +++I+ GL++P++ EV+ +V Sbjct: 408 FESQQGNVLNVPRGAKGLKR------NVHEAYGLLKESILEIRATGLSDPLIKPEVSFEV 461 Query: 17 LTGLT 3 + LT Sbjct: 462 FSSLT 466