BLASTX nr result

ID: Salvia21_contig00016824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00016824
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago t...   107   1e-21
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   104   9e-21
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   101   6e-20
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   100   1e-19
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   100   2e-19

>gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago truncatula]
          Length = 405

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/111 (45%), Positives = 75/111 (67%)
 Frame = -1

Query: 347 DDSMLFCRASIVECNTLKDVLINYEKCSGQAIDF*KSGIFFSKNVTEVVKHSILELFGVS 168
           D+  LFCRA++VE   L  +L  YE  SGQ I+  KS +FFS+N++   +  +  + GV 
Sbjct: 71  DNCFLFCRANVVEAQRLLTILKTYEAASGQEINLSKSEVFFSRNMSGAAQEDLSRIIGVR 130

Query: 167 QPLNTGRYLGLASLIGRDKKAMIFDFLRERLWQRIQSWQGKKLSKAGKEVL 15
             + TG+YLGL S+I RDK + +F F+++ +W+RI  W+G+ LSKAGKEV+
Sbjct: 131 HVMGTGKYLGLPSMIDRDKWS-VFSFIKDSIWKRINVWRGRALSKAGKEVM 180


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  104 bits (259), Expect = 9e-21
 Identities = 50/111 (45%), Positives = 76/111 (68%)
 Frame = -1

Query: 347  DDSMLFCRASIVECNTLKDVLINYEKCSGQAIDF*KSGIFFSKNVTEVVKHSILELFGVS 168
            DD  LF +A   +   +K++L  YE  SGQ+I+F KS +F+S+NV + VK SI ++ GV 
Sbjct: 1107 DDCFLFFKAKSGQAQGMKNILEMYESSSGQSINFQKSEVFYSRNVDDAVKASISQILGVQ 1166

Query: 167  QPLNTGRYLGLASLIGRDKKAMIFDFLRERLWQRIQSWQGKKLSKAGKEVL 15
            Q + TG+YLG+ S++GR  +   F F++ER+W++I SW  K LS+AG+E L
Sbjct: 1167 QVMGTGKYLGVPSMVGR-SRISTFKFVKERVWKKINSWSSKCLSQAGRETL 1216


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  101 bits (252), Expect = 6e-20
 Identities = 49/117 (41%), Positives = 79/117 (67%)
 Frame = -1

Query: 368 LGLFIALDDSMLFCRASIVECNTLKDVLINYEKCSGQAIDF*KSGIFFSKNVTEVVKHSI 189
           L LF A DD  LF +A+  E  +LK +L+ Y+  SGQ I+  KS + FS+N  +VVK  I
Sbjct: 145 LHLFFA-DDLYLFFKATESESRSLKQILLRYQNLSGQEINLNKSALTFSRNTDDVVKRGI 203

Query: 188 LELFGVSQPLNTGRYLGLASLIGRDKKAMIFDFLRERLWQRIQSWQGKKLSKAGKEV 18
             +  V +  + G YLG+ +++G++K+  +F+F+R ++W RIQ+W G++LS+AGKE+
Sbjct: 204 CSILQVEEXADPGIYLGMPAVVGKNKR-QLFEFVRRKVWNRIQNWNGRRLSRAGKEI 259


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/115 (40%), Positives = 78/115 (67%)
 Frame = -1

Query: 362  LFIALDDSMLFCRASIVECNTLKDVLINYEKCSGQAIDF*KSGIFFSKNVTEVVKHSILE 183
            LF A D+S LF +A+  E  +LK +L+ Y+  SGQ I+  K  + FS+N  +VVK  I  
Sbjct: 1234 LFFA-DBSYLFFKATESESRSLKQILLRYQNLSGQEINLNKXALTFSRNTDDVVKRGICS 1292

Query: 182  LFGVSQPLNTGRYLGLASLIGRDKKAMIFDFLRERLWQRIQSWQGKKLSKAGKEV 18
            +  V +  + G YLG+ +++G++K+  +F+F+R ++W RIQ+W G++LS+AGKE+
Sbjct: 1293 ILQVEEQADPGIYLGMPAVVGKNKR-QLFEFVRRKVWNRIQNWNGRRLSRAGKEI 1346


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/111 (43%), Positives = 71/111 (63%)
 Frame = -1

Query: 347  DDSMLFCRASIVECNTLKDVLINYEKCSGQAIDF*KSGIFFSKNVTEVVKHSILELFGVS 168
            DDS++ CRA+  E   L+ +L  YE+CSGQ I+  KS + FS N + + K +++    + 
Sbjct: 939  DDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQ 998

Query: 167  QPLNTGRYLGLASLIGRDKKAMIFDFLRERLWQRIQSWQGKKLSKAGKEVL 15
            +     RYLGL   +GR  +  IF +L+ER+WQRIQ W+ K LS+AGKE+L
Sbjct: 999  RETTNERYLGLPVFVGR-SRTKIFSYLKERIWQRIQGWKEKLLSRAGKEIL 1048


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