BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00016453
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   122   4e-26
ref|NP_175971.3| transcription initiation factor TFIIH subunit H...   101   6e-20
ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transc...   100   9e-20
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab...    99   4e-19
ref|XP_002310512.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18

>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vitis vinifera]
           gi|296090002|emb|CBI39821.3| unnamed protein product
           [Vitis vinifera]
          Length = 602

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/65 (90%), Positives = 63/65 (96%)
 Frame = -3

Query: 471 TRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSGE 292
           +RLKDAMSQ+YPKLQEIKESVQSDFRHQVSLLV PMLQALDAAFAHYDAD Q+RSA+SGE
Sbjct: 537 SRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQALDAAFAHYDADQQKRSARSGE 596

Query: 291 RPNGF 277
           RPNGF
Sbjct: 597 RPNGF 601


>ref|NP_175971.3| transcription initiation factor TFIIH subunit H1 [Arabidopsis
           thaliana] gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
           Full=Probable RNA polymerase II transcription factor B
           subunit 1-1; AltName: Full=General transcription and DNA
           repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
           Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332195172|gb|AEE33293.1| transcription initiation
           factor TFIIH subunit H1 [Arabidopsis thaliana]
          Length = 591

 Score =  101 bits (252), Expect = 6e-20
 Identities = 49/66 (74%), Positives = 56/66 (84%)
 Frame = -3

Query: 474 VTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSG 295
           V +LKDAMS  Y KL+ +KESVQSD RHQVSLLV PM QALDAAF HY+ D+QRR+AKSG
Sbjct: 525 VGKLKDAMSNTYSKLEAMKESVQSDLRHQVSLLVRPMQQALDAAFHHYEVDLQRRTAKSG 584

Query: 294 ERPNGF 277
           ERPNG+
Sbjct: 585 ERPNGY 590


>ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Cucumis sativus]
          Length = 729

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/67 (71%), Positives = 60/67 (89%)
 Frame = -3

Query: 474 VTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSG 295
           V+RLKDAM+++Y +L+EIKE+V +DFRHQVSLLV PM QALDAAF H+DAD+Q+RS KSG
Sbjct: 663 VSRLKDAMAKIYRQLEEIKETVVADFRHQVSLLVRPMHQALDAAFQHHDADMQKRSVKSG 722

Query: 294 ERPNGFT 274
           ER NG+T
Sbjct: 723 ERLNGYT 729


>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
           lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
           ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
          Length = 592

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/67 (74%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
 Frame = -3

Query: 474 VTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKS- 298
           V +LKDAMS  Y KL+ +KESVQSD RHQVSLLV PM QALDAAF HY+AD+QRR+AKS 
Sbjct: 525 VGKLKDAMSNTYSKLEAMKESVQSDLRHQVSLLVRPMQQALDAAFQHYEADLQRRTAKSG 584

Query: 297 GERPNGF 277
           GERPNG+
Sbjct: 585 GERPNGY 591


>ref|XP_002310512.1| predicted protein [Populus trichocarpa] gi|222853415|gb|EEE90962.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/67 (67%), Positives = 59/67 (88%)
 Frame = -3

Query: 474 VTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYDADVQRRSAKSG 295
           V+RLKDAMS++  +LQE+KESVQSD RHQV+LL+ PM QAL+AA  HYDA++Q+RSA+SG
Sbjct: 537 VSRLKDAMSKIDSQLQELKESVQSDLRHQVTLLLRPMQQALEAAMQHYDAELQKRSARSG 596

Query: 294 ERPNGFT 274
           +R NG+T
Sbjct: 597 DRSNGYT 603