BLASTX nr result

ID: Salvia21_contig00016420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00016420
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]    92   3e-17
emb|CAN77126.1| hypothetical protein VITISV_013628 [Vitis vinifera]    74   1e-11
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    73   2e-11
emb|CAN73151.1| hypothetical protein VITISV_029990 [Vitis vinifera]    72   5e-11
gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subc...    71   8e-11

>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
          Length = 2203

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/72 (59%), Positives = 50/72 (69%)
 Frame = +2

Query: 2   YPLTLKSQATATVKNFIEMVRCQFSTLIKAFQTDWGGEFRPLVHHLTTLGIHFQHPCPHI 181
           YP   KSQAT+ V  FI +V  +F T +K  QTDWGGEF PL   L   GI F+HPCPH+
Sbjct: 538 YPRQQKSQATSIVLQFIALVDRKFPTKLKCLQTDWGGEFHPLQSLLQKKGILFRHPCPHV 597

Query: 182 HTQNGKVERKHQ 217
           H QNGKVERKH+
Sbjct: 598 HQQNGKVERKHR 609


>emb|CAN77126.1| hypothetical protein VITISV_013628 [Vitis vinifera]
          Length = 678

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/77 (50%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
 Frame = +2

Query: 5   PLTLKSQATATVKN-FIEMVRCQF----STLIKAFQTDWGGEFRPLVHHLTTLGIHFQHP 169
           P  L     A V N F+E     F      L KA QTDWGGEFRPL   L  LGIH +HP
Sbjct: 322 PCVLTGDEQAMVGNAFVEFYSSHFLVKDQALGKALQTDWGGEFRPLKPFLENLGIHHRHP 381

Query: 170 CPHIHTQNGKVERKHQH 220
           CP+   QNG+VERK++H
Sbjct: 382 CPYTPQQNGRVERKNRH 398


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/73 (47%), Positives = 41/73 (56%)
 Frame = +2

Query: 2   YPLTLKSQATATVKNFIEMVRCQFSTLIKAFQTDWGGEFRPLVHHLTTLGIHFQHPCPHI 181
           Y L  KS    +   F  +V   F   I AFQ+DWGGE+  L  H  T+GIH Q  CPH 
Sbjct: 550 YLLRHKSDVYKSFCEFQHLVERMFGRKIIAFQSDWGGEYEKLNAHFKTIGIHHQVSCPHT 609

Query: 182 HTQNGKVERKHQH 220
           H QNG  ERKH+H
Sbjct: 610 HQQNGAAERKHRH 622


>emb|CAN73151.1| hypothetical protein VITISV_029990 [Vitis vinifera]
          Length = 437

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/73 (47%), Positives = 43/73 (58%)
 Frame = +2

Query: 2   YPLTLKSQATATVKNFIEMVRCQFSTLIKAFQTDWGGEFRPLVHHLTTLGIHFQHPCPHI 181
           YP+  KS+  +    F   V  Q S+ I A QTDWGGEFR L+  L   GI F HPCP+ 
Sbjct: 13  YPMKHKSKVPSIFLKFHVFVEKQLSSKILALQTDWGGEFRHLLPILEKFGILFGHPCPYT 72

Query: 182 HTQNGKVERKHQH 220
           H Q  + ERKH+H
Sbjct: 73  HQQQRRFERKHRH 85


>gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1177

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/73 (47%), Positives = 41/73 (56%)
 Frame = +2

Query: 2   YPLTLKSQATATVKNFIEMVRCQFSTLIKAFQTDWGGEFRPLVHHLTTLGIHFQHPCPHI 181
           Y L  KS+     K F  MV  QF+  I   QTDWGGE++ L      +GI  Q  CPH 
Sbjct: 427 YFLKFKSEVFEKFKEFQSMVERQFNRKILGMQTDWGGEYQKLNSFFKQIGIAHQVSCPHT 486

Query: 182 HTQNGKVERKHQH 220
           H QNG VERKH+H
Sbjct: 487 HQQNGAVERKHRH 499


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