BLASTX nr result

ID: Salvia21_contig00016315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00016315
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]     671   0.0  
emb|CBI17913.3| unnamed protein product [Vitis vinifera]              663   0.0  
ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana] gi|75174554...   645   0.0  
ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|2...   642   0.0  
ref|XP_002866187.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata] gi...   640   0.0  

>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score =  671 bits (1732), Expect = 0.0
 Identities = 335/421 (79%), Positives = 372/421 (88%)
 Frame = +3

Query: 117  ETKFSVMVSLFNWMQXXXXXXXXXXXXXXXXDTFCRPRNGADYFAAIRLILPALDRERGS 296
            ETKFSV+ SLF W+Q                DTFC   NG   F+AIRLILP LDRERGS
Sbjct: 4    ETKFSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFCI--NGHQ-FSAIRLILPNLDRERGS 60

Query: 297  YGLREHVLATCIIDALGISRDSPDSQRLINWRKGGAKSGAFAGNFALVAAEVLQRRQGMS 476
            YGL+E VLATC+IDALG+SR+S D+ RLINWRKGGAK+GA AGNFA+VAAEVLQRRQGM+
Sbjct: 61   YGLKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEVLQRRQGMT 120

Query: 477  SGDLTIVELNELLDRLATSDNRSEKISVLSELIRKTNVQEMKWIIMIILKDLKLGISEKS 656
            SG LTI ELN+LLD LA+S+NR+EK SVLS LI+KTN QEMKWI+MIILKDLKLGISEKS
Sbjct: 121  SGGLTIKELNDLLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKS 180

Query: 657  IFHEFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEVGKPVRPQLALRVSNAAAAWK 836
            IFHEFHPDAEDLFNVTCDLKLVCEKL+DRSQRHKRQDIEVGK VRPQLA+RV++A AAWK
Sbjct: 181  IFHEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWK 240

Query: 837  KLHGKEVVVECKFDGDRIQIHKNGAEINFFSRNFLDHPEYGYGMLDIIRENILVDRCILD 1016
            KLHGKEVVVECKFDGDRIQIHKNG EI+FFSRNFLDHPEY Y M +I+ +N+LVDRCILD
Sbjct: 241  KLHGKEVVVECKFDGDRIQIHKNGEEIHFFSRNFLDHPEYKYAMSNIVAQNLLVDRCILD 300

Query: 1017 GEMLVWDKSANRFAEFGSNQEIAKAAKDGLDSDRQLCYVAFDILYVGDTSVIHQSLKERH 1196
            GEMLVWD S NRFAEFGSNQEIAKAAK+GLDSDRQLCYVAFDILYVGDTSVIHQ+LKERH
Sbjct: 301  GEMLVWDISLNRFAEFGSNQEIAKAAKEGLDSDRQLCYVAFDILYVGDTSVIHQTLKERH 360

Query: 1197 QLLQQYVKPIAGCFEILVPNGGLNTHRPAGEPCWSLIVHDVDGVEKFFKETIENRDEGIV 1376
            +LLQ+ VKP+ G FEILVP+GGLNTHRP+GEPCWSLI +DVD VE+FFK+T+ENRDEGIV
Sbjct: 361  ELLQKVVKPLKGRFEILVPSGGLNTHRPSGEPCWSLIAYDVDDVERFFKKTVENRDEGIV 420

Query: 1377 L 1379
            L
Sbjct: 421  L 421


>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  663 bits (1710), Expect = 0.0
 Identities = 334/422 (79%), Positives = 371/422 (87%), Gaps = 1/422 (0%)
 Frame = +3

Query: 117  ETKFSVMVSLFNWMQXXXXXXXXXXXXXXXXDTFCRPRNGADYFAAIRLILPALDRERGS 296
            ETKFSV+ SLF W+Q                DTFC   NG   F+AIRLILP LDRERGS
Sbjct: 4    ETKFSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFCI--NGHQ-FSAIRLILPNLDRERGS 60

Query: 297  YGLREHVLATCIIDALGISRDSPDSQRLINWRKGGAKSGAFAGNFALVAAEVLQRRQGMS 476
            YGL+E VLATC+IDALG+SR+S D+ RLINWRKGGAK+GA AGNFA+VAAEVLQRRQGM+
Sbjct: 61   YGLKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEVLQRRQGMT 120

Query: 477  SGDLTIVELNELLDRLATSDNRSEKISVLSELIRKTNVQEMKWIIMIILKDLKLGISEKS 656
            SG LTI ELN+LLD LA+S+NR+EK SVLS LI+KTN QEMKWI+MIILKDLKLGISEKS
Sbjct: 121  SGGLTIKELNDLLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKS 180

Query: 657  IFHEFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEVGKPVRPQLALRVSNAAAAWK 836
            IFHEFHPDAEDLFNVTCDLKLVCEKL+DRSQRHKRQDIEVGK VRPQLA+RV++A AAWK
Sbjct: 181  IFHEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWK 240

Query: 837  KLHGKEVVVECKFDGDRIQIHKNGAEINFFSRNFLDHPEYGYGMLDIIRENILVDRCILD 1016
            KLHGKEVVVECKFDGDRIQIHKNG EI+FFSRNFLDHPEY Y M +I+ +N+LVDRCILD
Sbjct: 241  KLHGKEVVVECKFDGDRIQIHKNGEEIHFFSRNFLDHPEYKYAMSNIVAQNLLVDRCILD 300

Query: 1017 GEMLVWDKSANRFAEFGSNQEIAKAAKDGLDSDRQ-LCYVAFDILYVGDTSVIHQSLKER 1193
            GEMLVWD S NRFAEFGSNQEIAKAAK+GLDSDRQ L YVAFDILYVGDTSVIHQ+LKER
Sbjct: 301  GEMLVWDISLNRFAEFGSNQEIAKAAKEGLDSDRQVLSYVAFDILYVGDTSVIHQTLKER 360

Query: 1194 HQLLQQYVKPIAGCFEILVPNGGLNTHRPAGEPCWSLIVHDVDGVEKFFKETIENRDEGI 1373
            H+LLQ+ VKP+ G FEILVP+GGLNTHRP+GEPCWSLI +DVD VE+FFK+T+ENRDEGI
Sbjct: 361  HELLQKVVKPLKGRFEILVPSGGLNTHRPSGEPCWSLIAYDVDDVERFFKKTVENRDEGI 420

Query: 1374 VL 1379
            VL
Sbjct: 421  VL 422


>ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana]
            gi|75174554|sp|Q9LL84.1|DNLI4_ARATH RecName: Full=DNA
            ligase 4; AltName: Full=DNA ligase IV; AltName:
            Full=Polydeoxyribonucleotide synthase [ATP] 4
            gi|9651815|gb|AAF91284.1|AF233527_1 DNA ligase IV
            [Arabidopsis thaliana] gi|332009474|gb|AED96857.1| DNA
            ligase 4 [Arabidopsis thaliana]
          Length = 1219

 Score =  645 bits (1663), Expect = 0.0
 Identities = 314/422 (74%), Positives = 363/422 (86%), Gaps = 1/422 (0%)
 Frame = +3

Query: 117  ETKFSVMVSLFNWMQXXXXXXXXXXXXXXXXDTFCRPRNGADYFAAIRLILPALDRERGS 296
            E KFSV+VSLFNW+Q                DT+C+P   +DYF A+RLI+P+LDRERGS
Sbjct: 4    EIKFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKP---SDYFVAVRLIIPSLDRERGS 60

Query: 297  YGLREHVLATCIIDALGISRDSPDSQRLINWRKGG-AKSGAFAGNFALVAAEVLQRRQGM 473
            YGL+E VLATC+IDALGISRD+PD+ RL+NWRKGG AK+GA AGNF+L+AAEVLQRRQGM
Sbjct: 61   YGLKESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGM 120

Query: 474  SSGDLTIVELNELLDRLATSDNRSEKISVLSELIRKTNVQEMKWIIMIILKDLKLGISEK 653
            +SG LTI ELN+LLDRLA+S+NR+EK  VLS LI+KTN QEMKW+I IILKDLKLG+SEK
Sbjct: 121  ASGGLTIKELNDLLDRLASSENRAEKTLVLSTLIQKTNAQEMKWVIRIILKDLKLGMSEK 180

Query: 654  SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEVGKPVRPQLALRVSNAAAAW 833
            SIF EFHPDAEDLFNVTCDLKLVCEKLRDR QRHKRQDIEVGK VRPQLA+R+ +  AAW
Sbjct: 181  SIFQEFHPDAEDLFNVTCDLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRIGDVNAAW 240

Query: 834  KKLHGKEVVVECKFDGDRIQIHKNGAEINFFSRNFLDHPEYGYGMLDIIRENILVDRCIL 1013
            KKLHGK+VV ECKFDGDRIQIHKNG +I++FSRNFLDH EY + M D+I +NILVD+CIL
Sbjct: 241  KKLHGKDVVAECKFDGDRIQIHKNGTDIHYFSRNFLDHSEYAHAMSDLIVQNILVDKCIL 300

Query: 1014 DGEMLVWDKSANRFAEFGSNQEIAKAAKDGLDSDRQLCYVAFDILYVGDTSVIHQSLKER 1193
            DGEMLVWD S NRFAEFGSNQEIAKAA++GLDS +QLCYVAFD+LYVGDTSVIHQSLKER
Sbjct: 301  DGEMLVWDTSLNRFAEFGSNQEIAKAAREGLDSHKQLCYVAFDVLYVGDTSVIHQSLKER 360

Query: 1194 HQLLQQYVKPIAGCFEILVPNGGLNTHRPAGEPCWSLIVHDVDGVEKFFKETIENRDEGI 1373
            H+LL++ VKP+ G  E+LVP GGLN HRP+GEP WS++VH    VE+FFKET+ENRDEGI
Sbjct: 361  HELLKKVVKPLKGRLEVLVPEGGLNVHRPSGEPSWSIVVHAAADVERFFKETVENRDEGI 420

Query: 1374 VL 1379
            VL
Sbjct: 421  VL 422


>ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|222866696|gb|EEF03827.1|
            predicted protein [Populus trichocarpa]
          Length = 1242

 Score =  642 bits (1656), Expect = 0.0
 Identities = 321/423 (75%), Positives = 363/423 (85%), Gaps = 1/423 (0%)
 Frame = +3

Query: 114  SETKFSVMVSLFNWMQXXXXXXXXXXXXXXXXDTFCRPRNGADYFAAIRLILPALDRERG 293
            + TKFS++VSLFNW+                 DTFC P   +DYF+A+RLILP LDRERG
Sbjct: 11   AHTKFSILVSLFNWISKTKTSSRKRSKFRKFIDTFCSP---SDYFSAVRLILPNLDRERG 67

Query: 294  SYGLREHVLATCIIDALGISRDSPDSQRLINWRKGGAKS-GAFAGNFALVAAEVLQRRQG 470
            +YGL+E VLA  +I+ALG+SRDSPD+ +LINWRKGGA + GA AGNF+LVAAEVLQRRQG
Sbjct: 68   TYGLKESVLAVSLIEALGMSRDSPDALKLINWRKGGANATGANAGNFSLVAAEVLQRRQG 127

Query: 471  MSSGDLTIVELNELLDRLATSDNRSEKISVLSELIRKTNVQEMKWIIMIILKDLKLGISE 650
              SG LTI ELN LLD+LA+S+NR EK +VL+ LI KTN QEMKWIIMIILKDLKLG+SE
Sbjct: 128  TVSGGLTIEELNGLLDKLASSENRGEKTAVLAALINKTNTQEMKWIIMIILKDLKLGMSE 187

Query: 651  KSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEVGKPVRPQLALRVSNAAAA 830
            KS+FHEFHPDAEDLFNVTCDLKLVCEKLRDR+QRHKRQDIEVGK VRPQLA+RVS+A AA
Sbjct: 188  KSVFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAMRVSDAHAA 247

Query: 831  WKKLHGKEVVVECKFDGDRIQIHKNGAEINFFSRNFLDHPEYGYGMLDIIRENILVDRCI 1010
            WKKLHGKEVVVECKFDGDRIQIHKNGAE+++FSRNFLDH EY +GM DII +N+L +RCI
Sbjct: 248  WKKLHGKEVVVECKFDGDRIQIHKNGAEVHYFSRNFLDHSEYAHGMSDIIVQNVLDERCI 307

Query: 1011 LDGEMLVWDKSANRFAEFGSNQEIAKAAKDGLDSDRQLCYVAFDILYVGDTSVIHQSLKE 1190
            LDGEMLVWD S NRFAEFGSNQEIAKAA+DGLDSDRQLCYVAFDILYVGDTSVIHQ+LKE
Sbjct: 308  LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLDSDRQLCYVAFDILYVGDTSVIHQTLKE 367

Query: 1191 RHQLLQQYVKPIAGCFEILVPNGGLNTHRPAGEPCWSLIVHDVDGVEKFFKETIENRDEG 1370
            RH+LL++ VKP+ G  EILVPNGGLN HR  GEP  SLI ++VD +EKFFKETIENRDEG
Sbjct: 368  RHELLRKVVKPVKGRLEILVPNGGLNAHRLPGEPYCSLIAYNVDDIEKFFKETIENRDEG 427

Query: 1371 IVL 1379
            IVL
Sbjct: 428  IVL 430


>ref|XP_002866187.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata] gi|297312022|gb|EFH42446.1|
            ATLIG4 [Arabidopsis lyrata subsp. lyrata]
          Length = 1221

 Score =  640 bits (1652), Expect = 0.0
 Identities = 313/424 (73%), Positives = 364/424 (85%), Gaps = 3/424 (0%)
 Frame = +3

Query: 117  ETKFSVMVSLFNWMQXXXXXXXXXXXXXXXXDTFCRPRNGADYFAAIRLILPALDRERGS 296
            E KFSV+VSLFNW+Q                DT+C+P   +DYF A+RLI+P+LDRERGS
Sbjct: 4    EIKFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKP---SDYFVAVRLIIPSLDRERGS 60

Query: 297  YGLREHVLATCIIDALGISRDSPDSQRLINWRKGG-AKSGAFAGNFALVAAEVLQRRQGM 473
            YGL+E VLATC+IDALGISRD+PD+ RL+NWRKGG AK+GA AGNF+L+AAEVLQRRQGM
Sbjct: 61   YGLKESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGM 120

Query: 474  SSGDLTIVELNELLDRLATSDNR--SEKISVLSELIRKTNVQEMKWIIMIILKDLKLGIS 647
            +SG LT+ ELN+LLDRLA+S+NR  +EK  VLS LI+KTN QEMKW+I IILKDLKLG+S
Sbjct: 121  ASGGLTVKELNDLLDRLASSENRCRAEKTLVLSTLIQKTNAQEMKWVIRIILKDLKLGMS 180

Query: 648  EKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEVGKPVRPQLALRVSNAAA 827
            EKSIF EFHPDAEDLFNVTCDLKLVCEKLRDR QRHKRQDIEVGK VRPQLA+R+S+  A
Sbjct: 181  EKSIFQEFHPDAEDLFNVTCDLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRISDVNA 240

Query: 828  AWKKLHGKEVVVECKFDGDRIQIHKNGAEINFFSRNFLDHPEYGYGMLDIIRENILVDRC 1007
            AWKKLHGK+VV ECKFDGDRIQIHKNG +I++FSRNFLDH EY + M D+I +NILVD+C
Sbjct: 241  AWKKLHGKDVVAECKFDGDRIQIHKNGTDIHYFSRNFLDHSEYAHAMSDLIVQNILVDKC 300

Query: 1008 ILDGEMLVWDKSANRFAEFGSNQEIAKAAKDGLDSDRQLCYVAFDILYVGDTSVIHQSLK 1187
            ILDGEMLVWD S NRFAEFGSNQEIAKAA++GLDS +QLCYVAFD+LYVGDTSVIHQSLK
Sbjct: 301  ILDGEMLVWDTSLNRFAEFGSNQEIAKAAREGLDSHKQLCYVAFDVLYVGDTSVIHQSLK 360

Query: 1188 ERHQLLQQYVKPIAGCFEILVPNGGLNTHRPAGEPCWSLIVHDVDGVEKFFKETIENRDE 1367
            ERH+LL++ VKP+ G  E+LVP GGLN HRP+GEP WS++VH    VE+FFKET+ENRDE
Sbjct: 361  ERHELLRKVVKPLKGRLEVLVPEGGLNVHRPSGEPSWSIVVHAAADVERFFKETVENRDE 420

Query: 1368 GIVL 1379
            G+VL
Sbjct: 421  GVVL 424


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