BLASTX nr result
ID: Salvia21_contig00016243
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Salvia21_contig00016243 (837 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 161 6e-50 ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transc... 143 2e-44 ref|XP_004171236.1| PREDICTED: probable RNA polymerase II transc... 144 4e-44 ref|XP_002310512.1| predicted protein [Populus trichocarpa] gi|2... 128 2e-38 ref|XP_002443866.1| hypothetical protein SORBIDRAFT_07g003540 [S... 129 3e-38 >ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed protein product [Vitis vinifera] Length = 602 Score = 161 bits (407), Expect(2) = 6e-50 Identities = 78/135 (57%), Positives = 108/135 (80%), Gaps = 2/135 (1%) Frame = +2 Query: 305 QVIKRAKYKSSVKDPGVPGVIKLSIERFIFMPNDQKSGVKLNVEFKIVKGHKFTKEGSSK 484 +V+KRA+YK+SVKD GV GV+K++ ++F+FMPND S + +VEF+ +KGHKF+K GS+K Sbjct: 4 EVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNK 63 Query: 485 QALLNLTQD--QGGNYIFEFDTFADRDVCREFVARAIAFYTEGGRAIPERIAPPVTNEQL 658 ALLNLTQD +GG YIFEF+ + DR+VCREFV RA+A ++E +A E+ A + +EQL Sbjct: 64 PALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFDEQL 123 Query: 659 SSIETERRIKLLQEN 703 S+IE ERRIKLL+E+ Sbjct: 124 STIEMERRIKLLRED 138 Score = 63.2 bits (152), Expect(2) = 6e-50 Identities = 30/40 (75%), Positives = 32/40 (80%) Frame = +3 Query: 717 SELQTLHKQFVFGGILTDDEFWATRKKLLDQNDSRRPKQR 836 SELQ LHKQFV G+LT+ EFWATRKKLLD N SR KQR Sbjct: 139 SELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQR 178 >ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1-like [Cucumis sativus] Length = 729 Score = 143 bits (361), Expect(2) = 2e-44 Identities = 73/137 (53%), Positives = 95/137 (69%) Frame = +2 Query: 293 MSDKQVIKRAKYKSSVKDPGVPGVIKLSIERFIFMPNDQKSGVKLNVEFKIVKGHKFTKE 472 M K V K AKYK+SVKDPG PGV++++ +F+F P+D S KL+VEF+ +KGHK TKE Sbjct: 1 MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKE 60 Query: 473 GSSKQALLNLTQDQGGNYIFEFDTFADRDVCREFVARAIAFYTEGGRAIPERIAPPVTNE 652 GS+K LNLT+DQGG+YIFEF F+D VCRE V A+A E +A ER +E Sbjct: 61 GSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQAPSERPVAAFPHE 120 Query: 653 QLSSIETERRIKLLQEN 703 QLS +E E R++ LQE+ Sbjct: 121 QLSKLEMELRMRCLQED 137 Score = 62.4 bits (150), Expect(2) = 2e-44 Identities = 27/39 (69%), Positives = 34/39 (87%) Frame = +3 Query: 717 SELQTLHKQFVFGGILTDDEFWATRKKLLDQNDSRRPKQ 833 SELQ LHKQFV GG+LT+ EFWA RKKLL+Q++S++ KQ Sbjct: 138 SELQKLHKQFVIGGVLTESEFWAARKKLLEQDNSKKSKQ 176 >ref|XP_004171236.1| PREDICTED: probable RNA polymerase II transcription factor B subunit 1-3-like, partial [Cucumis sativus] Length = 220 Score = 144 bits (363), Expect(2) = 4e-44 Identities = 74/141 (52%), Positives = 97/141 (68%) Frame = +2 Query: 281 SDCSMSDKQVIKRAKYKSSVKDPGVPGVIKLSIERFIFMPNDQKSGVKLNVEFKIVKGHK 460 S+ M K V K AKYK+SVKDPG PGV++++ +F+F P+D S KL+VEF+ +KGHK Sbjct: 22 SEGRMGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHK 81 Query: 461 FTKEGSSKQALLNLTQDQGGNYIFEFDTFADRDVCREFVARAIAFYTEGGRAIPERIAPP 640 TKEGS+K LNLT+DQGG+YIFEF F+D VCRE V A+A E +A ER Sbjct: 82 NTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQAPSERPVAA 141 Query: 641 VTNEQLSSIETERRIKLLQEN 703 +EQLS +E E R++ LQE+ Sbjct: 142 FPHEQLSKLEMELRMRCLQED 162 Score = 60.8 bits (146), Expect(2) = 4e-44 Identities = 26/39 (66%), Positives = 34/39 (87%) Frame = +3 Query: 717 SELQTLHKQFVFGGILTDDEFWATRKKLLDQNDSRRPKQ 833 SELQ LHKQFV GG+LT+ EFWA RKKLL++++S++ KQ Sbjct: 163 SELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQ 201 >ref|XP_002310512.1| predicted protein [Populus trichocarpa] gi|222853415|gb|EEE90962.1| predicted protein [Populus trichocarpa] Length = 603 Score = 128 bits (321), Expect(2) = 2e-38 Identities = 67/137 (48%), Positives = 91/137 (66%) Frame = +2 Query: 293 MSDKQVIKRAKYKSSVKDPGVPGVIKLSIERFIFMPNDQKSGVKLNVEFKIVKGHKFTKE 472 M+ QV KR K+KSSVKDPG PG + L++ER +F PN S KLN+EF+ VK HK+TKE Sbjct: 1 MASGQVSKRVKFKSSVKDPGTPGRLYLTLERLMFKPNSPNSATKLNMEFRFVKNHKYTKE 60 Query: 473 GSSKQALLNLTQDQGGNYIFEFDTFADRDVCREFVARAIAFYTEGGRAIPERIAPPVTNE 652 GS+K +LNLT QG +YIFEF+++ D VC+E V +A++ E + I P +E Sbjct: 61 GSNKAPMLNLTSSQGVSYIFEFESYDDLHVCKECVGKALSKTGETPKPIDTSEVP---SE 117 Query: 653 QLSSIETERRIKLLQEN 703 Q S+ E R+ +LQEN Sbjct: 118 QPSTEELLLRMNMLQEN 134 Score = 57.8 bits (138), Expect(2) = 2e-38 Identities = 28/40 (70%), Positives = 32/40 (80%) Frame = +3 Query: 717 SELQTLHKQFVFGGILTDDEFWATRKKLLDQNDSRRPKQR 836 SELQ LHK+FV GILT+ EFWATRKKLL N S++ KQR Sbjct: 135 SELQNLHKRFVSDGILTEAEFWATRKKLLGGNFSKKSKQR 174 >ref|XP_002443866.1| hypothetical protein SORBIDRAFT_07g003540 [Sorghum bicolor] gi|241940216|gb|EES13361.1| hypothetical protein SORBIDRAFT_07g003540 [Sorghum bicolor] Length = 600 Score = 129 bits (323), Expect(2) = 3e-38 Identities = 63/133 (47%), Positives = 89/133 (66%), Gaps = 5/133 (3%) Frame = +2 Query: 320 AKYKSSVKDPGVPGVIKLSIERFIFMPNDQKSGVKLNVEFKIVKGHKFTKEGSSKQALLN 499 AKYK+++KDPG PG+++++ +RF F PND +S +K NV+F+ +KGHKF K +K ALLN Sbjct: 8 AKYKTTIKDPGTPGILRMNDDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEGNKAALLN 67 Query: 500 LT-QDQGGNYIFEFDTFADRDVCREFVARAIAFY----TEGGRAIPERIAPPVTNEQLSS 664 L+ +D+ G YIFEFD +RD+CR+FVAR + + PE EQLS Sbjct: 68 LSKEDKAGGYIFEFDNVGNRDLCRDFVARVLGKHQGTVPPRPTVAPENSVASAALEQLSV 127 Query: 665 IETERRIKLLQEN 703 E ERR+KLL+E+ Sbjct: 128 AEVERRVKLLRED 140 Score = 56.6 bits (135), Expect(2) = 3e-38 Identities = 26/40 (65%), Positives = 30/40 (75%) Frame = +3 Query: 717 SELQTLHKQFVFGGILTDDEFWATRKKLLDQNDSRRPKQR 836 SELQ LHK+FV G IL + EFWATRK LLD ++R KQR Sbjct: 141 SELQKLHKKFVLGNILQESEFWATRKNLLDDEANKRSKQR 180