BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00016243
         (837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   161   6e-50
ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transc...   143   2e-44
ref|XP_004171236.1| PREDICTED: probable RNA polymerase II transc...   144   4e-44
ref|XP_002310512.1| predicted protein [Populus trichocarpa] gi|2...   128   2e-38
ref|XP_002443866.1| hypothetical protein SORBIDRAFT_07g003540 [S...   129   3e-38

>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vitis vinifera]
           gi|296090002|emb|CBI39821.3| unnamed protein product
           [Vitis vinifera]
          Length = 602

 Score =  161 bits (407), Expect(2) = 6e-50
 Identities = 78/135 (57%), Positives = 108/135 (80%), Gaps = 2/135 (1%)
 Frame = +2

Query: 305 QVIKRAKYKSSVKDPGVPGVIKLSIERFIFMPNDQKSGVKLNVEFKIVKGHKFTKEGSSK 484
           +V+KRA+YK+SVKD GV GV+K++ ++F+FMPND  S  + +VEF+ +KGHKF+K GS+K
Sbjct: 4   EVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNK 63

Query: 485 QALLNLTQD--QGGNYIFEFDTFADRDVCREFVARAIAFYTEGGRAIPERIAPPVTNEQL 658
            ALLNLTQD  +GG YIFEF+ + DR+VCREFV RA+A ++E  +A  E+ A  + +EQL
Sbjct: 64  PALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFDEQL 123

Query: 659 SSIETERRIKLLQEN 703
           S+IE ERRIKLL+E+
Sbjct: 124 STIEMERRIKLLRED 138



 Score = 63.2 bits (152), Expect(2) = 6e-50
 Identities = 30/40 (75%), Positives = 32/40 (80%)
 Frame = +3

Query: 717 SELQTLHKQFVFGGILTDDEFWATRKKLLDQNDSRRPKQR 836
           SELQ LHKQFV  G+LT+ EFWATRKKLLD N SR  KQR
Sbjct: 139 SELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQR 178


>ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Cucumis sativus]
          Length = 729

 Score =  143 bits (361), Expect(2) = 2e-44
 Identities = 73/137 (53%), Positives = 95/137 (69%)
 Frame = +2

Query: 293 MSDKQVIKRAKYKSSVKDPGVPGVIKLSIERFIFMPNDQKSGVKLNVEFKIVKGHKFTKE 472
           M  K V K AKYK+SVKDPG PGV++++  +F+F P+D  S  KL+VEF+ +KGHK TKE
Sbjct: 1   MGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTKE 60

Query: 473 GSSKQALLNLTQDQGGNYIFEFDTFADRDVCREFVARAIAFYTEGGRAIPERIAPPVTNE 652
           GS+K   LNLT+DQGG+YIFEF  F+D  VCRE V  A+A   E  +A  ER      +E
Sbjct: 61  GSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQAPSERPVAAFPHE 120

Query: 653 QLSSIETERRIKLLQEN 703
           QLS +E E R++ LQE+
Sbjct: 121 QLSKLEMELRMRCLQED 137



 Score = 62.4 bits (150), Expect(2) = 2e-44
 Identities = 27/39 (69%), Positives = 34/39 (87%)
 Frame = +3

Query: 717 SELQTLHKQFVFGGILTDDEFWATRKKLLDQNDSRRPKQ 833
           SELQ LHKQFV GG+LT+ EFWA RKKLL+Q++S++ KQ
Sbjct: 138 SELQKLHKQFVIGGVLTESEFWAARKKLLEQDNSKKSKQ 176


>ref|XP_004171236.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-3-like, partial [Cucumis sativus]
          Length = 220

 Score =  144 bits (363), Expect(2) = 4e-44
 Identities = 74/141 (52%), Positives = 97/141 (68%)
 Frame = +2

Query: 281 SDCSMSDKQVIKRAKYKSSVKDPGVPGVIKLSIERFIFMPNDQKSGVKLNVEFKIVKGHK 460
           S+  M  K V K AKYK+SVKDPG PGV++++  +F+F P+D  S  KL+VEF+ +KGHK
Sbjct: 22  SEGRMGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHK 81

Query: 461 FTKEGSSKQALLNLTQDQGGNYIFEFDTFADRDVCREFVARAIAFYTEGGRAIPERIAPP 640
            TKEGS+K   LNLT+DQGG+YIFEF  F+D  VCRE V  A+A   E  +A  ER    
Sbjct: 82  NTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQAPSERPVAA 141

Query: 641 VTNEQLSSIETERRIKLLQEN 703
             +EQLS +E E R++ LQE+
Sbjct: 142 FPHEQLSKLEMELRMRCLQED 162



 Score = 60.8 bits (146), Expect(2) = 4e-44
 Identities = 26/39 (66%), Positives = 34/39 (87%)
 Frame = +3

Query: 717 SELQTLHKQFVFGGILTDDEFWATRKKLLDQNDSRRPKQ 833
           SELQ LHKQFV GG+LT+ EFWA RKKLL++++S++ KQ
Sbjct: 163 SELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQ 201


>ref|XP_002310512.1| predicted protein [Populus trichocarpa] gi|222853415|gb|EEE90962.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score =  128 bits (321), Expect(2) = 2e-38
 Identities = 67/137 (48%), Positives = 91/137 (66%)
 Frame = +2

Query: 293 MSDKQVIKRAKYKSSVKDPGVPGVIKLSIERFIFMPNDQKSGVKLNVEFKIVKGHKFTKE 472
           M+  QV KR K+KSSVKDPG PG + L++ER +F PN   S  KLN+EF+ VK HK+TKE
Sbjct: 1   MASGQVSKRVKFKSSVKDPGTPGRLYLTLERLMFKPNSPNSATKLNMEFRFVKNHKYTKE 60

Query: 473 GSSKQALLNLTQDQGGNYIFEFDTFADRDVCREFVARAIAFYTEGGRAIPERIAPPVTNE 652
           GS+K  +LNLT  QG +YIFEF+++ D  VC+E V +A++   E  + I     P   +E
Sbjct: 61  GSNKAPMLNLTSSQGVSYIFEFESYDDLHVCKECVGKALSKTGETPKPIDTSEVP---SE 117

Query: 653 QLSSIETERRIKLLQEN 703
           Q S+ E   R+ +LQEN
Sbjct: 118 QPSTEELLLRMNMLQEN 134



 Score = 57.8 bits (138), Expect(2) = 2e-38
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +3

Query: 717 SELQTLHKQFVFGGILTDDEFWATRKKLLDQNDSRRPKQR 836
           SELQ LHK+FV  GILT+ EFWATRKKLL  N S++ KQR
Sbjct: 135 SELQNLHKRFVSDGILTEAEFWATRKKLLGGNFSKKSKQR 174


>ref|XP_002443866.1| hypothetical protein SORBIDRAFT_07g003540 [Sorghum bicolor]
           gi|241940216|gb|EES13361.1| hypothetical protein
           SORBIDRAFT_07g003540 [Sorghum bicolor]
          Length = 600

 Score =  129 bits (323), Expect(2) = 3e-38
 Identities = 63/133 (47%), Positives = 89/133 (66%), Gaps = 5/133 (3%)
 Frame = +2

Query: 320 AKYKSSVKDPGVPGVIKLSIERFIFMPNDQKSGVKLNVEFKIVKGHKFTKEGSSKQALLN 499
           AKYK+++KDPG PG+++++ +RF F PND +S +K NV+F+ +KGHKF K   +K ALLN
Sbjct: 8   AKYKTTIKDPGTPGILRMNDDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEGNKAALLN 67

Query: 500 LT-QDQGGNYIFEFDTFADRDVCREFVARAIAFY----TEGGRAIPERIAPPVTNEQLSS 664
           L+ +D+ G YIFEFD   +RD+CR+FVAR +  +           PE        EQLS 
Sbjct: 68  LSKEDKAGGYIFEFDNVGNRDLCRDFVARVLGKHQGTVPPRPTVAPENSVASAALEQLSV 127

Query: 665 IETERRIKLLQEN 703
            E ERR+KLL+E+
Sbjct: 128 AEVERRVKLLRED 140



 Score = 56.6 bits (135), Expect(2) = 3e-38
 Identities = 26/40 (65%), Positives = 30/40 (75%)
 Frame = +3

Query: 717 SELQTLHKQFVFGGILTDDEFWATRKKLLDQNDSRRPKQR 836
           SELQ LHK+FV G IL + EFWATRK LLD   ++R KQR
Sbjct: 141 SELQKLHKKFVLGNILQESEFWATRKNLLDDEANKRSKQR 180