BLASTX nr result
ID: Salvia21_contig00015925
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Salvia21_contig00015925 (235 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cu... 64 3e-16 ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, pa... 64 3e-16 ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p... 64 5e-16 ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-15 ref|NP_565733.1| DNA repair protein RAD50 [Arabidopsis thaliana]... 64 2e-15 >ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus] Length = 1316 Score = 64.3 bits (155), Expect(2) = 3e-16 Identities = 31/34 (91%), Positives = 32/34 (94%) Frame = +3 Query: 3 IMEDRKGQENFQLIVITHDERFAQLIGQRQYC*K 104 IMEDRKGQENFQLIVITHDERFAQLIGQRQ+ K Sbjct: 1262 IMEDRKGQENFQLIVITHDERFAQLIGQRQHAEK 1295 Score = 45.4 bits (106), Expect(2) = 3e-16 Identities = 19/24 (79%), Positives = 23/24 (95%) Frame = +1 Query: 97 AEKYYCITKDDYQHSIIDAQEIFD 168 AEKYY +TKDD+QHSII++QEIFD Sbjct: 1293 AEKYYRVTKDDHQHSIIESQEIFD 1316 >ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus] Length = 1088 Score = 64.3 bits (155), Expect(2) = 3e-16 Identities = 31/34 (91%), Positives = 32/34 (94%) Frame = +3 Query: 3 IMEDRKGQENFQLIVITHDERFAQLIGQRQYC*K 104 IMEDRKGQENFQLIVITHDERFAQLIGQRQ+ K Sbjct: 1034 IMEDRKGQENFQLIVITHDERFAQLIGQRQHAEK 1067 Score = 45.4 bits (106), Expect(2) = 3e-16 Identities = 19/24 (79%), Positives = 23/24 (95%) Frame = +1 Query: 97 AEKYYCITKDDYQHSIIDAQEIFD 168 AEKYY +TKDD+QHSII++QEIFD Sbjct: 1065 AEKYYRVTKDDHQHSIIESQEIFD 1088 >ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like [Vitis vinifera] Length = 1316 Score = 64.3 bits (155), Expect(2) = 5e-16 Identities = 31/34 (91%), Positives = 32/34 (94%) Frame = +3 Query: 3 IMEDRKGQENFQLIVITHDERFAQLIGQRQYC*K 104 IMEDRKGQENFQLIVITHDERFAQLIGQRQ+ K Sbjct: 1262 IMEDRKGQENFQLIVITHDERFAQLIGQRQHAEK 1295 Score = 44.7 bits (104), Expect(2) = 5e-16 Identities = 19/24 (79%), Positives = 22/24 (91%) Frame = +1 Query: 97 AEKYYCITKDDYQHSIIDAQEIFD 168 AEKYY + KDD+QHSII+AQEIFD Sbjct: 1293 AEKYYRVAKDDHQHSIIEAQEIFD 1316 >ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|222847406|gb|EEE84953.1| predicted protein [Populus trichocarpa] Length = 1316 Score = 63.9 bits (154), Expect(2) = 1e-15 Identities = 30/31 (96%), Positives = 31/31 (100%) Frame = +3 Query: 3 IMEDRKGQENFQLIVITHDERFAQLIGQRQY 95 IMEDRKGQENFQLIVITHDERFAQLIGQRQ+ Sbjct: 1262 IMEDRKGQENFQLIVITHDERFAQLIGQRQH 1292 Score = 43.5 bits (101), Expect(2) = 1e-15 Identities = 18/24 (75%), Positives = 22/24 (91%) Frame = +1 Query: 97 AEKYYCITKDDYQHSIIDAQEIFD 168 AE+YY + KDD+QHSII+AQEIFD Sbjct: 1293 AERYYRVAKDDHQHSIIEAQEIFD 1316 >ref|NP_565733.1| DNA repair protein RAD50 [Arabidopsis thaliana] gi|57013013|sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA repair protein RAD50; Short=AtRAD50 gi|7110148|gb|AAF36810.1|AF168748_1 DNA repair-recombination protein [Arabidopsis thaliana] gi|20197622|gb|AAD15407.2| putative RAD50 DNA repair protein [Arabidopsis thaliana] gi|22654997|gb|AAM98090.1| At2g31970/F22D22.28 [Arabidopsis thaliana] gi|29028758|gb|AAO64758.1| At2g31970/F22D22.28 [Arabidopsis thaliana] gi|330253520|gb|AEC08614.1| DNA repair protein RAD50 [Arabidopsis thaliana] Length = 1316 Score = 63.5 bits (153), Expect(2) = 2e-15 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = +3 Query: 3 IMEDRKGQENFQLIVITHDERFAQLIGQRQYC*K 104 IMEDRKGQENFQLIVITHDERFAQ+IGQRQ+ K Sbjct: 1262 IMEDRKGQENFQLIVITHDERFAQMIGQRQHAEK 1295 Score = 43.5 bits (101), Expect(2) = 2e-15 Identities = 19/24 (79%), Positives = 21/24 (87%) Frame = +1 Query: 97 AEKYYCITKDDYQHSIIDAQEIFD 168 AEKYY + KDD QHSII+AQEIFD Sbjct: 1293 AEKYYRVAKDDMQHSIIEAQEIFD 1316