BLASTX nr result

ID: Salvia21_contig00015925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00015925
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cu...    64   3e-16
ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, pa...    64   3e-16
ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...    64   5e-16
ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-15
ref|NP_565733.1| DNA repair protein RAD50 [Arabidopsis thaliana]...    64   2e-15

>ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
          Length = 1316

 Score = 64.3 bits (155), Expect(2) = 3e-16
 Identities = 31/34 (91%), Positives = 32/34 (94%)
 Frame = +3

Query: 3    IMEDRKGQENFQLIVITHDERFAQLIGQRQYC*K 104
            IMEDRKGQENFQLIVITHDERFAQLIGQRQ+  K
Sbjct: 1262 IMEDRKGQENFQLIVITHDERFAQLIGQRQHAEK 1295



 Score = 45.4 bits (106), Expect(2) = 3e-16
 Identities = 19/24 (79%), Positives = 23/24 (95%)
 Frame = +1

Query: 97   AEKYYCITKDDYQHSIIDAQEIFD 168
            AEKYY +TKDD+QHSII++QEIFD
Sbjct: 1293 AEKYYRVTKDDHQHSIIESQEIFD 1316


>ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
          Length = 1088

 Score = 64.3 bits (155), Expect(2) = 3e-16
 Identities = 31/34 (91%), Positives = 32/34 (94%)
 Frame = +3

Query: 3    IMEDRKGQENFQLIVITHDERFAQLIGQRQYC*K 104
            IMEDRKGQENFQLIVITHDERFAQLIGQRQ+  K
Sbjct: 1034 IMEDRKGQENFQLIVITHDERFAQLIGQRQHAEK 1067



 Score = 45.4 bits (106), Expect(2) = 3e-16
 Identities = 19/24 (79%), Positives = 23/24 (95%)
 Frame = +1

Query: 97   AEKYYCITKDDYQHSIIDAQEIFD 168
            AEKYY +TKDD+QHSII++QEIFD
Sbjct: 1065 AEKYYRVTKDDHQHSIIESQEIFD 1088


>ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like [Vitis
            vinifera]
          Length = 1316

 Score = 64.3 bits (155), Expect(2) = 5e-16
 Identities = 31/34 (91%), Positives = 32/34 (94%)
 Frame = +3

Query: 3    IMEDRKGQENFQLIVITHDERFAQLIGQRQYC*K 104
            IMEDRKGQENFQLIVITHDERFAQLIGQRQ+  K
Sbjct: 1262 IMEDRKGQENFQLIVITHDERFAQLIGQRQHAEK 1295



 Score = 44.7 bits (104), Expect(2) = 5e-16
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +1

Query: 97   AEKYYCITKDDYQHSIIDAQEIFD 168
            AEKYY + KDD+QHSII+AQEIFD
Sbjct: 1293 AEKYYRVAKDDHQHSIIEAQEIFD 1316


>ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|222847406|gb|EEE84953.1|
            predicted protein [Populus trichocarpa]
          Length = 1316

 Score = 63.9 bits (154), Expect(2) = 1e-15
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +3

Query: 3    IMEDRKGQENFQLIVITHDERFAQLIGQRQY 95
            IMEDRKGQENFQLIVITHDERFAQLIGQRQ+
Sbjct: 1262 IMEDRKGQENFQLIVITHDERFAQLIGQRQH 1292



 Score = 43.5 bits (101), Expect(2) = 1e-15
 Identities = 18/24 (75%), Positives = 22/24 (91%)
 Frame = +1

Query: 97   AEKYYCITKDDYQHSIIDAQEIFD 168
            AE+YY + KDD+QHSII+AQEIFD
Sbjct: 1293 AERYYRVAKDDHQHSIIEAQEIFD 1316


>ref|NP_565733.1| DNA repair protein RAD50 [Arabidopsis thaliana]
            gi|57013013|sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA
            repair protein RAD50; Short=AtRAD50
            gi|7110148|gb|AAF36810.1|AF168748_1 DNA
            repair-recombination protein [Arabidopsis thaliana]
            gi|20197622|gb|AAD15407.2| putative RAD50 DNA repair
            protein [Arabidopsis thaliana] gi|22654997|gb|AAM98090.1|
            At2g31970/F22D22.28 [Arabidopsis thaliana]
            gi|29028758|gb|AAO64758.1| At2g31970/F22D22.28
            [Arabidopsis thaliana] gi|330253520|gb|AEC08614.1| DNA
            repair protein RAD50 [Arabidopsis thaliana]
          Length = 1316

 Score = 63.5 bits (153), Expect(2) = 2e-15
 Identities = 30/34 (88%), Positives = 32/34 (94%)
 Frame = +3

Query: 3    IMEDRKGQENFQLIVITHDERFAQLIGQRQYC*K 104
            IMEDRKGQENFQLIVITHDERFAQ+IGQRQ+  K
Sbjct: 1262 IMEDRKGQENFQLIVITHDERFAQMIGQRQHAEK 1295



 Score = 43.5 bits (101), Expect(2) = 2e-15
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +1

Query: 97   AEKYYCITKDDYQHSIIDAQEIFD 168
            AEKYY + KDD QHSII+AQEIFD
Sbjct: 1293 AEKYYRVAKDDMQHSIIEAQEIFD 1316


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