BLASTX nr result

ID: Salvia21_contig00015850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00015850
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tu...   169   3e-40
ref|XP_003602366.1| RNA-binding protein [Medicago truncatula] gi...   164   5e-39
ref|XP_003602365.1| RNA-binding protein [Medicago truncatula] gi...   164   5e-39
ref|XP_003602364.1| RNA-binding protein [Medicago truncatula] gi...   164   5e-39
ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   163   2e-38

>gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
          Length = 269

 Score =  169 bits (427), Expect = 3e-40
 Identities = 77/83 (92%), Positives = 82/83 (98%)
 Frame = -2

Query: 249 RFGVSRHSDYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGLVDYTNYEDM 70
           R G+SRHSDYRVI+RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT+GLVDYTNYEDM
Sbjct: 108 RHGISRHSDYRVIIRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDM 167

Query: 69  KYAMRKLDDSEFRNPWTRTYIRV 1
           KYA+RKLDD+EFRNPWTRTYIRV
Sbjct: 168 KYAIRKLDDTEFRNPWTRTYIRV 190


>ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
           gi|355491414|gb|AES72617.1| RNA-binding protein
           [Medicago truncatula]
          Length = 273

 Score =  164 bits (416), Expect = 5e-39
 Identities = 75/83 (90%), Positives = 82/83 (98%)
 Frame = -2

Query: 249 RFGVSRHSDYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGLVDYTNYEDM 70
           RFGVSRHS++RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT+GLVDYTNY+DM
Sbjct: 114 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDM 173

Query: 69  KYAMRKLDDSEFRNPWTRTYIRV 1
           KYA+RKLDD+EFRNPW R+YIRV
Sbjct: 174 KYAIRKLDDTEFRNPWARSYIRV 196


>ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
           gi|355491413|gb|AES72616.1| RNA-binding protein
           [Medicago truncatula]
          Length = 272

 Score =  164 bits (416), Expect = 5e-39
 Identities = 75/83 (90%), Positives = 82/83 (98%)
 Frame = -2

Query: 249 RFGVSRHSDYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGLVDYTNYEDM 70
           RFGVSRHS++RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT+GLVDYTNY+DM
Sbjct: 114 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDM 173

Query: 69  KYAMRKLDDSEFRNPWTRTYIRV 1
           KYA+RKLDD+EFRNPW R+YIRV
Sbjct: 174 KYAIRKLDDTEFRNPWARSYIRV 196


>ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
           gi|355491412|gb|AES72615.1| RNA-binding protein
           [Medicago truncatula]
          Length = 380

 Score =  164 bits (416), Expect = 5e-39
 Identities = 75/83 (90%), Positives = 82/83 (98%)
 Frame = -2

Query: 249 RFGVSRHSDYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGLVDYTNYEDM 70
           RFGVSRHS++RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT+GLVDYTNY+DM
Sbjct: 221 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDM 280

Query: 69  KYAMRKLDDSEFRNPWTRTYIRV 1
           KYA+RKLDD+EFRNPW R+YIRV
Sbjct: 281 KYAIRKLDDTEFRNPWARSYIRV 303


>ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
          Length = 263

 Score =  163 bits (412), Expect = 2e-38
 Identities = 73/83 (87%), Positives = 81/83 (97%)
 Frame = -2

Query: 249 RFGVSRHSDYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGLVDYTNYEDM 70
           RFG+SRHS++RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT+G+VDYTNY+DM
Sbjct: 113 RFGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDM 172

Query: 69  KYAMRKLDDSEFRNPWTRTYIRV 1
           KYA+RKLDD+EFRNPW R YIRV
Sbjct: 173 KYAIRKLDDTEFRNPWARAYIRV 195


Top