BLASTX nr result

ID: Salvia21_contig00015836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00015836
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37506.3| unnamed protein product [Vitis vinifera]              310   6e-82
ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   300   3e-79
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   275   1e-71
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...   275   1e-71
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr...   246   6e-63

>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  310 bits (793), Expect = 6e-82
 Identities = 153/257 (59%), Positives = 203/257 (78%)
 Frame = -3

Query: 773 MDELSFTDSELDHHVRNALKAAIQGDCNFYNQLVAVIHHKERLVTEEVALLVTCLKAVTG 594
           M+E++F+DSEL +HVR+AL++   GD + Y+QL+ V+HHKERL  +EVALLVT LKA++G
Sbjct: 15  MEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPDEVALLVTSLKALSG 74

Query: 593 AVSCVHIVHHRSLLAAILGMSLWDYGTDVMDXXXXXXXXXASSNGDYVDLCLEMLVMNFM 414
           AVSC+ +VHH+SLL++I GMSLW+YG DVMD         A+S+G+Y+D  L+MLV NFM
Sbjct: 75  AVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGNYLDCSLDMLVSNFM 134

Query: 413 PPPAASYFVELLKQPRGLAKKIQVLDRVHSTLKDISNLVPLTPLRLEKIVRDRMPPIYAK 234
           PP +    ++ LKQPRGLA+K QVL RVHSTLKDI++LVPL P RL  IV  RMP ++ K
Sbjct: 135 PPYS---LLDFLKQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPIVIQRMPNVFTK 191

Query: 233 EPFIVMYAENILRLESGTMGELVGSTGLVALMDKLIELDVEISWEDILQDDFHKGMFDIE 54
           EP I++Y EN+LRLE G + ELVG+  LVALMD+L++LDVEI+WE++LQDD  KG+F++E
Sbjct: 192 EPLIMIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQDDCSKGIFEME 251

Query: 53  LEDLESPADPIEQDGDE 3
           LED+E PAD +E DG E
Sbjct: 252 LEDMEEPADDVENDGGE 268


>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Vitis vinifera]
          Length = 636

 Score =  300 bits (769), Expect = 3e-79
 Identities = 153/266 (57%), Positives = 202/266 (75%), Gaps = 9/266 (3%)
 Frame = -3

Query: 773 MDELSFTDSELDHHVRNALKAAIQGDCNFYNQLVAVIHHKERLVTEEVALLVTCLKAVTG 594
           M+E++F+DSEL +HVR+AL++   GD + Y+QL+ V+HHKERL  +EVALLVT LKA++G
Sbjct: 15  MEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPDEVALLVTSLKALSG 74

Query: 593 AVSCVHIVHHRSLLAAILGMSLWDYGTDVMDXXXXXXXXXASSNGDYVDLCLEMLVMNFM 414
           AVSC+ +VHH+SLL++I GMSLW+YG DVMD         A+S+G+Y+D  L+MLV NFM
Sbjct: 75  AVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGNYLDCSLDMLVSNFM 134

Query: 413 PPPAASYFVELLKQPRGLAKKIQVLDRVHSTLKDISNLVPLTPLRLEKIVRDRMPPIYAK 234
           PP +    ++ LKQPRGLA+K QVL RVHSTLKDI++LVPL P RL  IV  RMP ++ K
Sbjct: 135 PPYS---LLDFLKQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPIVIQRMPNVFTK 191

Query: 233 EPF---------IVMYAENILRLESGTMGELVGSTGLVALMDKLIELDVEISWEDILQDD 81
           EP          I +Y EN+LRLE G + ELVG+  LVALMD+L++LDVEI+WE++LQDD
Sbjct: 192 EPVSSICSTLFRIQIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQDD 251

Query: 80  FHKGMFDIELEDLESPADPIEQDGDE 3
             KG+F++ELED+E PAD +E DG E
Sbjct: 252 CSKGIFEMELEDMEEPADDVENDGGE 277


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Cucumis sativus]
          Length = 625

 Score =  275 bits (704), Expect = 1e-71
 Identities = 140/257 (54%), Positives = 184/257 (71%)
 Frame = -3

Query: 773 MDELSFTDSELDHHVRNALKAAIQGDCNFYNQLVAVIHHKERLVTEEVALLVTCLKAVTG 594
           M++++ TD++L   +R  L +   GD + YNQLV VIHH++RL  +EVALLVTCLKA++G
Sbjct: 15  MEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSG 74

Query: 593 AVSCVHIVHHRSLLAAILGMSLWDYGTDVMDXXXXXXXXXASSNGDYVDLCLEMLVMNFM 414
           AVSC+ I+ H SLLAAI  MSLWDYG++VMD         A SNG YVD CL+MLV NFM
Sbjct: 75  AVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGKYVDSCLDMLVNNFM 134

Query: 413 PPPAASYFVELLKQPRGLAKKIQVLDRVHSTLKDISNLVPLTPLRLEKIVRDRMPPIYAK 234
           PP +   +++LLK+P GL +K +VL RVH+ LKDIS+LVPL PLRLE+ V  +M  ++  
Sbjct: 135 PPNS---YMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFN 191

Query: 233 EPFIVMYAENILRLESGTMGELVGSTGLVALMDKLIELDVEISWEDILQDDFHKGMFDIE 54
           E    +Y EN+LRLE G + E VG   L AL+DKL++LDVEI W+DILQDDF KG+F++E
Sbjct: 192 ESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEME 251

Query: 53  LEDLESPADPIEQDGDE 3
           LED +   D I +D  E
Sbjct: 252 LEDDDDTTDDINEDSSE 268


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Cucumis sativus]
          Length = 626

 Score =  275 bits (704), Expect = 1e-71
 Identities = 140/257 (54%), Positives = 184/257 (71%)
 Frame = -3

Query: 773 MDELSFTDSELDHHVRNALKAAIQGDCNFYNQLVAVIHHKERLVTEEVALLVTCLKAVTG 594
           M++++ TD++L   +R  L +   GD + YNQLV VIHH++RL  +EVALLVTCLKA++G
Sbjct: 15  MEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSG 74

Query: 593 AVSCVHIVHHRSLLAAILGMSLWDYGTDVMDXXXXXXXXXASSNGDYVDLCLEMLVMNFM 414
           AVSC+ I+ H SLLAAI  MSLWDYG++VMD         A SNG YVD CL+MLV NFM
Sbjct: 75  AVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGKYVDSCLDMLVNNFM 134

Query: 413 PPPAASYFVELLKQPRGLAKKIQVLDRVHSTLKDISNLVPLTPLRLEKIVRDRMPPIYAK 234
           PP +   +++LLK+P GL +K +VL RVH+ LKDIS+LVPL PLRLE+ V  +M  ++  
Sbjct: 135 PPNS---YMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFN 191

Query: 233 EPFIVMYAENILRLESGTMGELVGSTGLVALMDKLIELDVEISWEDILQDDFHKGMFDIE 54
           E    +Y EN+LRLE G + E VG   L AL+DKL++LDVEI W+DILQDDF KG+F++E
Sbjct: 192 ESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEME 251

Query: 53  LEDLESPADPIEQDGDE 3
           LED +   D I +D  E
Sbjct: 252 LEDDDDTTDDINEDSSE 268


>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Glycine max]
          Length = 628

 Score =  246 bits (629), Expect = 6e-63
 Identities = 132/252 (52%), Positives = 174/252 (69%)
 Frame = -3

Query: 773 MDELSFTDSELDHHVRNALKAAIQGDCNFYNQLVAVIHHKERLVTEEVALLVTCLKAVTG 594
           M+   F+DS+L HH R  L A   GD   Y++LV  +H K+ L  +EVA+LVT LKA++G
Sbjct: 15  MENNDFSDSQLVHHFRGVLVAVTTGDRENYDELVGYLHPKKHLNPDEVAILVTTLKALSG 74

Query: 593 AVSCVHIVHHRSLLAAILGMSLWDYGTDVMDXXXXXXXXXASSNGDYVDLCLEMLVMNFM 414
           AVS +  VHH SLL A+  MSLW+ G D+MD         A SNG Y+D CLEMLV NF+
Sbjct: 75  AVSYIDSVHHESLLFAVSRMSLWNCGIDIMDALLELIISLAVSNGKYIDWCLEMLVKNFV 134

Query: 413 PPPAASYFVELLKQPRGLAKKIQVLDRVHSTLKDISNLVPLTPLRLEKIVRDRMPPIYAK 234
           PP    Y ++ L+Q  G+ +K +VL RVH+ LK+I++LVPL PLRL  IV  +MP +++K
Sbjct: 135 PP---FYLLDSLRQENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQKMPSVFSK 191

Query: 233 EPFIVMYAENILRLESGTMGELVGSTGLVALMDKLIELDVEISWEDILQDDFHKGMFDIE 54
           E  IVMY EN+LRLESG +GE VGST L AL+D+L+ELDVEI W+ ILQ+D  KG+F++E
Sbjct: 192 ETEIVMYVENMLRLESGALGETVGSTMLPALVDRLLELDVEIGWDGILQED-AKGIFEME 250

Query: 53  LEDLESPADPIE 18
           LED+    D  E
Sbjct: 251 LEDVTEFTDEDE 262


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