BLASTX nr result

ID: Salvia21_contig00015756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00015756
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   162   3e-38
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   162   4e-38
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   159   5e-37
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     159   5e-37
emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group] gi...   158   6e-37

>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  162 bits (411), Expect = 3e-38
 Identities = 77/98 (78%), Positives = 87/98 (88%)
 Frame = -1

Query: 620  FIFTLNGGAICWKSSKQETVADSTTEAEYIVASDAAKEVVWIRNFIQELGVVRSAVDSVP 441
            F+F LNGGA+ WKSSKQETVADSTTEAEYI AS+AAKE VWIRNFI ELG+V SA   + 
Sbjct: 760  FVFILNGGAVSWKSSKQETVADSTTEAEYIAASEAAKEGVWIRNFITELGMVPSASSPMD 819

Query: 440  IYCDNNGAIAQAKEPRSHQRSKHIMRRYHLIREIIGRG 327
            +YCDNNGAIAQAKEPRSHQ+SKHI+RRYHLIRE++ RG
Sbjct: 820  LYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRG 857


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  162 bits (410), Expect = 4e-38
 Identities = 77/98 (78%), Positives = 87/98 (88%)
 Frame = -1

Query: 620  FIFTLNGGAICWKSSKQETVADSTTEAEYIVASDAAKEVVWIRNFIQELGVVRSAVDSVP 441
            F+F LNGGA+ WKSSKQETVADSTT+AEYI AS+AAKE VWIRNFI ELGVV SA   + 
Sbjct: 1176 FVFILNGGAVSWKSSKQETVADSTTKAEYIAASEAAKEGVWIRNFIAELGVVPSASSPMD 1235

Query: 440  IYCDNNGAIAQAKEPRSHQRSKHIMRRYHLIREIIGRG 327
            +YCDNNGAIAQAKEPRSHQ+SKHI+RRYHLIRE++ RG
Sbjct: 1236 LYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRG 1273


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  159 bits (401), Expect = 5e-37
 Identities = 72/98 (73%), Positives = 87/98 (88%)
 Frame = -1

Query: 620  FIFTLNGGAICWKSSKQETVADSTTEAEYIVASDAAKEVVWIRNFIQELGVVRSAVDSVP 441
            F+F LNGGA+ WKSSKQ+TVADSTTEAEYI AS+AAKE VWI+ F+ +LGV+ SA   + 
Sbjct: 1129 FVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSASSPMD 1188

Query: 440  IYCDNNGAIAQAKEPRSHQRSKHIMRRYHLIREIIGRG 327
            +YCDN+GAIAQAKEPRSHQ+SKHI+RRYHLIRE++GRG
Sbjct: 1189 LYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREMVGRG 1226


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  159 bits (401), Expect = 5e-37
 Identities = 72/98 (73%), Positives = 87/98 (88%)
 Frame = -1

Query: 620  FIFTLNGGAICWKSSKQETVADSTTEAEYIVASDAAKEVVWIRNFIQELGVVRSAVDSVP 441
            F+F LNGGA+ WKSSKQ+TVADSTTEAEYI AS+AAKE VWI+ F+ +LGV+ SA   + 
Sbjct: 1042 FVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSASSPMD 1101

Query: 440  IYCDNNGAIAQAKEPRSHQRSKHIMRRYHLIREIIGRG 327
            +YCDN+GAIAQAKEPRSHQ+SKHI+RRYHLIRE++GRG
Sbjct: 1102 LYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREMVGRG 1139


>emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group]
           gi|38347202|emb|CAD40526.2| OSJNBa0023J03.14 [Oryza
           sativa Japonica Group] gi|116308930|emb|CAH66059.1|
           OSIGBa0125J07.8 [Oryza sativa Indica Group]
           gi|116309043|emb|CAH66155.1| OSIGBa0113B06.1 [Oryza
           sativa Indica Group]
          Length = 704

 Score =  158 bits (400), Expect = 6e-37
 Identities = 73/98 (74%), Positives = 86/98 (87%)
 Frame = -1

Query: 620 FIFTLNGGAICWKSSKQETVADSTTEAEYIVASDAAKEVVWIRNFIQELGVVRSAVDSVP 441
           F+F LNGGA+ WKSSKQ TVADSTTEAEYI AS+AAKEVVWI+ F+ +LGV+ S    + 
Sbjct: 567 FVFCLNGGAVSWKSSKQNTVADSTTEAEYIAASEAAKEVVWIKKFVSQLGVMTSTSRPMD 626

Query: 440 IYCDNNGAIAQAKEPRSHQRSKHIMRRYHLIREIIGRG 327
           +YCDN+GAIAQAKEPRSHQ+SKHI+RRYHLIREI+GRG
Sbjct: 627 LYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREIVGRG 664


Top