BLASTX nr result

ID: Salvia21_contig00015443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00015443
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27869.3| unnamed protein product [Vitis vinifera]              212   9e-80
ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec...   212   9e-80
ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation spec...   185   7e-69
ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p...   194   5e-68
ref|XP_002308275.1| predicted protein [Populus trichocarpa] gi|2...   182   9e-68

>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  212 bits (540), Expect(2) = 9e-80
 Identities = 101/140 (72%), Positives = 116/140 (82%)
 Frame = +2

Query: 71  GDESESMNPSSSTALDIYPLSCYYFGSKDSVSLNTETLADRLLRLKANYDAYGMRSCVAA 250
           GD S S   SS+  LDIYPLSCYYFGSKD + L  ETLADR+LR+K+NY  YG R+CV A
Sbjct: 85  GDRSSS-GDSSNHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVA 143

Query: 251 VIVVELFKHPHLLLLQVQNSIYRLPGGRVRRGESDTDCLKRKLSSKLSAGEDGRGPEWEV 430
           VI+VELFKHPHLLLLQV+NS ++LPGGR+R GES+ + LKRKLS KLS  EDG G +WEV
Sbjct: 144 VILVELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEV 203

Query: 431 GECLGMWWRPDFESLLYPYL 490
           GECLGMWWRPDFE+LLYPYL
Sbjct: 204 GECLGMWWRPDFETLLYPYL 223



 Score =  112 bits (279), Expect(2) = 9e-80
 Identities = 55/85 (64%), Positives = 63/85 (74%)
 Frame = +1

Query: 493 PNIKRPKXXXXXXXXXXXXXXXXXXXECTKLYLVKLPPSRRFIVPKNFRLLAIPLCQLHE 672
           PN+K PK                   ECTKL+LVKLPPSR+FIVPKN +LLAIPLCQLHE
Sbjct: 225 PNVKNPK-------------------ECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHE 265

Query: 673 NDETYGPIISGVPQLLSKYSFNFIE 747
           ND+TYGPII+GVPQLLSK+SFN I+
Sbjct: 266 NDKTYGPIIAGVPQLLSKFSFNIID 290


>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Vitis vinifera]
          Length = 284

 Score =  212 bits (540), Expect(2) = 9e-80
 Identities = 101/140 (72%), Positives = 116/140 (82%)
 Frame = +2

Query: 71  GDESESMNPSSSTALDIYPLSCYYFGSKDSVSLNTETLADRLLRLKANYDAYGMRSCVAA 250
           GD S S   SS+  LDIYPLSCYYFGSKD + L  ETLADR+LR+K+NY  YG R+CV A
Sbjct: 78  GDRSSS-GDSSNHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVA 136

Query: 251 VIVVELFKHPHLLLLQVQNSIYRLPGGRVRRGESDTDCLKRKLSSKLSAGEDGRGPEWEV 430
           VI+VELFKHPHLLLLQV+NS ++LPGGR+R GES+ + LKRKLS KLS  EDG G +WEV
Sbjct: 137 VILVELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEV 196

Query: 431 GECLGMWWRPDFESLLYPYL 490
           GECLGMWWRPDFE+LLYPYL
Sbjct: 197 GECLGMWWRPDFETLLYPYL 216



 Score =  112 bits (279), Expect(2) = 9e-80
 Identities = 55/85 (64%), Positives = 63/85 (74%)
 Frame = +1

Query: 493 PNIKRPKXXXXXXXXXXXXXXXXXXXECTKLYLVKLPPSRRFIVPKNFRLLAIPLCQLHE 672
           PN+K PK                   ECTKL+LVKLPPSR+FIVPKN +LLAIPLCQLHE
Sbjct: 218 PNVKNPK-------------------ECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHE 258

Query: 673 NDETYGPIISGVPQLLSKYSFNFIE 747
           ND+TYGPII+GVPQLLSK+SFN I+
Sbjct: 259 NDKTYGPIIAGVPQLLSKFSFNIID 283


>ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449488056|ref|XP_004157928.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 217

 Score =  185 bits (470), Expect(2) = 7e-69
 Identities = 85/147 (57%), Positives = 111/147 (75%)
 Frame = +2

Query: 74  DESESMNPSSSTALDIYPLSCYYFGSKDSVSLNTETLADRLLRLKANYDAYGMRSCVAAV 253
           D+ ++ +    + +DIYPLS YYFGSK+ +    ETL+DR+LR+K+NY A+G+R+CV AV
Sbjct: 11  DDDDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAV 70

Query: 254 IVVELFKHPHLLLLQVQNSIYRLPGGRVRRGESDTDCLKRKLSSKLSAGEDGRGPEWEVG 433
           ++VELFKHPHLLL Q++NSI++LPGGR+R  ESD D L RKL+ KLSA        WEV 
Sbjct: 71  MLVELFKHPHLLLFQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASDASHWEVS 130

Query: 434 ECLGMWWRPDFESLLYPYLHQT*RGLK 514
           ECLGMWWRPDFE+LL+PYL    +G K
Sbjct: 131 ECLGMWWRPDFETLLFPYLSTNVKGAK 157



 Score =  102 bits (255), Expect(2) = 7e-69
 Identities = 44/58 (75%), Positives = 54/58 (93%)
 Frame = +1

Query: 571 ECTKLYLVKLPPSRRFIVPKNFRLLAIPLCQLHENDETYGPIISGVPQLLSKYSFNFI 744
           ECTKL+LVKLP SR+F+VPKN +L+A+PLCQ+HEN +TYGPIISG+PQLLSK+SFN I
Sbjct: 158 ECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPIISGIPQLLSKFSFNII 215


>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 214

 Score =  194 bits (492), Expect(2) = 5e-68
 Identities = 95/150 (63%), Positives = 113/150 (75%)
 Frame = +2

Query: 41  MGDHSIVEEKGDESESMNPSSSTALDIYPLSCYYFGSKDSVSLNTETLADRLLRLKANYD 220
           MGDH +V        S +      LDIYPLS YYFGSKD +    ETL DR+ R+K+NY 
Sbjct: 1   MGDHEVVVNNNHHEASRD--QGFVLDIYPLSRYYFGSKDPLPFRDETLVDRVQRMKSNYL 58

Query: 221 AYGMRSCVAAVIVVELFKHPHLLLLQVQNSIYRLPGGRVRRGESDTDCLKRKLSSKLSAG 400
           A+G+R+CV AVI+VELFKHPHLLLLQ++NSI++LPGGR+R GESD   LKRKLS KLS  
Sbjct: 59  AHGLRTCVEAVILVELFKHPHLLLLQIKNSIFKLPGGRIRPGESDIGGLKRKLSRKLSNN 118

Query: 401 EDGRGPEWEVGECLGMWWRPDFESLLYPYL 490
           +D    +WEVGECLGMWWRPDFE+LLYPYL
Sbjct: 119 QD--QTDWEVGECLGMWWRPDFETLLYPYL 146



 Score = 91.3 bits (225), Expect(2) = 5e-68
 Identities = 47/84 (55%), Positives = 56/84 (66%)
 Frame = +1

Query: 493 PNIKRPKXXXXXXXXXXXXXXXXXXXECTKLYLVKLPPSRRFIVPKNFRLLAIPLCQLHE 672
           PN+K PK                   ECTKL+LV+LP S +FIVPKN +LLA+PL Q+H+
Sbjct: 148 PNLKTPK-------------------ECTKLFLVRLPTSCKFIVPKNLKLLAVPLSQIHD 188

Query: 673 NDETYGPIISGVPQLLSKYSFNFI 744
           N +TYG IISGVPQLLSKYSF  I
Sbjct: 189 NHKTYGGIISGVPQLLSKYSFRII 212


>ref|XP_002308275.1| predicted protein [Populus trichocarpa] gi|222854251|gb|EEE91798.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  182 bits (461), Expect(2) = 9e-68
 Identities = 88/150 (58%), Positives = 110/150 (73%)
 Frame = +2

Query: 41  MGDHSIVEEKGDESESMNPSSSTALDIYPLSCYYFGSKDSVSLNTETLADRLLRLKANYD 220
           MGDHS+           N   ST ++IYPL  YYFGSKD ++   ET+ADR+ R+K+N+ 
Sbjct: 1   MGDHSVTVTDN------NNHQSTVIEIYPLGSYYFGSKDPIAFRDETIADRVQRMKSNFS 54

Query: 221 AYGMRSCVAAVIVVELFKHPHLLLLQVQNSIYRLPGGRVRRGESDTDCLKRKLSSKLSAG 400
           A G+R+ V AV++VELFKHPHLLLLQV+N+ ++LPGGR+R GESD D L+RKLS  LS  
Sbjct: 55  ARGLRTSVQAVMLVELFKHPHLLLLQVRNAFFKLPGGRLRPGESDIDGLQRKLSRMLSVN 114

Query: 401 EDGRGPEWEVGECLGMWWRPDFESLLYPYL 490
           ED     WEVG+CLGMWWR DFE+LLYPYL
Sbjct: 115 ED-ETDHWEVGDCLGMWWRSDFETLLYPYL 143



 Score =  102 bits (254), Expect(2) = 9e-68
 Identities = 45/56 (80%), Positives = 53/56 (94%)
 Frame = +1

Query: 571 ECTKLYLVKLPPSRRFIVPKNFRLLAIPLCQLHENDETYGPIISGVPQLLSKYSFN 738
           ECTKLY+VKLP SR+FIVPKN +LLA+PLCQ+HEN +TYGP+ISGVPQLLSK+SFN
Sbjct: 152 ECTKLYVVKLPASRKFIVPKNLKLLAVPLCQVHENHKTYGPVISGVPQLLSKFSFN 207


Top