BLASTX nr result

ID: Salvia21_contig00015082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00015082
         (2358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525464.1| RNA binding protein, putative [Ricinus commu...   416   e-113
ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti...   249   2e-63
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...   246   3e-62
emb|CBI36672.3| unnamed protein product [Vitis vinifera]              246   3e-62
ref|XP_002325403.1| predicted protein [Populus trichocarpa] gi|2...   233   2e-58

>ref|XP_002525464.1| RNA binding protein, putative [Ricinus communis]
            gi|223535277|gb|EEF36954.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 450

 Score =  416 bits (1068), Expect = e-113
 Identities = 239/439 (54%), Positives = 285/439 (64%), Gaps = 15/439 (3%)
 Frame = -2

Query: 1430 ATLLVWHLPEAIPRDALTRLFSHYGASSVRPFSHGRVKNCAFVDFKDEMSAYQAQKQLHG 1251
            +TLL+ HLPEAIP + L+RLFSHYGA+SVRP + GR+ NCAFVDFK+E  AYQAQ+QL+G
Sbjct: 9    STLLIRHLPEAIPHETLSRLFSHYGATSVRPCAGGRLTNCAFVDFKNEALAYQAQRQLNG 68

Query: 1250 LRFLGKVMSVERAS--KVVEGTKQQDNEREVRKD---ASSMVKDASAPSHHYTGSIS-HA 1089
            LRFLGKV++ E+A+  K  E      +E ++RKD    +S+ KDASA       S S  A
Sbjct: 69   LRFLGKVLAAEKANNNKPNENNVLTQSEAQIRKDHTLPTSVDKDASAMIDTDGRSKSVPA 128

Query: 1088 SEPIAQKLGIEYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMN-------- 933
            SEPIA +LG++YPFPPHLEY YPPPDGNILTNIVNALIAVPRFYTQVLHLMN        
Sbjct: 129  SEPIAPRLGVDYPFPPHLEYTYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPF 188

Query: 932  KMNIPA-PFRKALXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXEVGXXXXX 756
            +M +P  P   +                                         V      
Sbjct: 189  RMALPTPPLPPSAPPPPPPPPPTVAGKPHLADLSSSEAEMESSDEDIDNKTHPVSREIKS 248

Query: 755  XXXXXXXXAIVGPAVDKDVAHEAVGLKEVALVXXXXXXXXXKNPVLQIRITQKQNQPELQ 576
                    AIVGP VDKDV HEAVGLK  +LV         KNPVLQI+I  K +Q E  
Sbjct: 249  RRKRVRQEAIVGPGVDKDVVHEAVGLKPSSLVPKEIPVIKKKNPVLQIKIAPKVSQTEQT 308

Query: 575  EYDSAKELQEPIPESSARETFATLEELNSGKLPPEEILSLPKFKNYTAGDPTPVLYIKNL 396
            +  S KE  E   E    + FAT EEL S KL PEEILSLP+FKNYT G+P  VLYIKNL
Sbjct: 309  DDISMKESDEQDEEGLDHKPFATPEELESNKLAPEEILSLPQFKNYTVGNPASVLYIKNL 368

Query: 395  AKDVVVDDFYFIFGSFFGSVDAAKSNLIVKLMQEGRMKGQAFITFPTVELARNALSAVNG 216
            +KD+V DDF++IFGS FGS+DAAK  L VKLMQEGRM+GQAF+TFP+VELA  AL+ VNG
Sbjct: 369  SKDMVADDFFYIFGSLFGSLDAAKVGLSVKLMQEGRMRGQAFVTFPSVELAHQALNLVNG 428

Query: 215  YVFKGKAVVIQFGRSPAAA 159
            YVFKGK ++IQFGR+P+A+
Sbjct: 429  YVFKGKPMIIQFGRNPSAS 447


>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
           gi|298205172|emb|CBI17231.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score =  249 bits (636), Expect = 2e-63
 Identities = 131/190 (68%), Positives = 146/190 (76%)
 Frame = -2

Query: 728 IVGPAVDKDVAHEAVGLKEVALVXXXXXXXXXKNPVLQIRITQKQNQPELQEYDSAKELQ 549
           IVGP VDKDVAHEAVG+K   LV         KNPVLQI+I  K       E    KE +
Sbjct: 271 IVGPGVDKDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIVPKVITEHKDECSIMKESE 330

Query: 548 EPIPESSARETFATLEELNSGKLPPEEILSLPKFKNYTAGDPTPVLYIKNLAKDVVVDDF 369
           +   E    + +ATLEEL SGKLPPEEILSLP FKNYTAG+P PVLYIKNLAKDVVVDDF
Sbjct: 331 DSEKEDFDLKPYATLEELKSGKLPPEEILSLPMFKNYTAGNPAPVLYIKNLAKDVVVDDF 390

Query: 368 YFIFGSFFGSVDAAKSNLIVKLMQEGRMKGQAFITFPTVELARNALSAVNGYVFKGKAVV 189
           YFIFGS FGSVDAAKS L VKLMQEGRM+GQAF+TFP+VELA +AL+ VNGYVFKGK ++
Sbjct: 391 YFIFGSLFGSVDAAKSGLSVKLMQEGRMRGQAFVTFPSVELAHHALNLVNGYVFKGKPMI 450

Query: 188 IQFGRSPAAA 159
           IQFGR+PAAA
Sbjct: 451 IQFGRNPAAA 460



 Score =  236 bits (603), Expect = 2e-59
 Identities = 132/206 (64%), Positives = 152/206 (73%), Gaps = 6/206 (2%)
 Frame = -2

Query: 1496 PIMAPMTQQLMWNXXXXXXXSAATLLVWHLPEAIPRDALTRLFSHYGASSVRPFSHGRVK 1317
            P++ P TQ            SAATLL+ HLPEAIP+D L+RLFS YGASSVRP + GR++
Sbjct: 5    PMLGPRTQSF------EAEKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPCTSGRLR 58

Query: 1316 NCAFVDFKDEMSAYQAQKQLHGLRFLGKVMSVERASKVVEGTKQQDNEREVRKDAS---S 1146
            NCAFVDFK EM A QA +QL+GLRFLGKV+ VERA+K  E  KQ+ +E    KD +   S
Sbjct: 59   NCAFVDFKSEMLASQALRQLNGLRFLGKVLLVERANKPTEDDKQK-SEALFGKDLTKPVS 117

Query: 1145 MVKDASAPSHHYTGSISH---ASEPIAQKLGIEYPFPPHLEYAYPPPDGNILTNIVNALI 975
            ++KD +       G  S    ASEPIA +LGI+YPFPPHLEYAYPPPDGNILTNIVNALI
Sbjct: 118  LIKDFTMARDLDEGLKSSSLPASEPIAARLGIDYPFPPHLEYAYPPPDGNILTNIVNALI 177

Query: 974  AVPRFYTQVLHLMNKMNIPAPFRKAL 897
            AVPRFY QVLHLMNKMNIPAPFR AL
Sbjct: 178  AVPRFYVQVLHLMNKMNIPAPFRMAL 203


>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
           vinifera]
          Length = 463

 Score =  246 bits (627), Expect = 3e-62
 Identities = 129/190 (67%), Positives = 144/190 (75%)
 Frame = -2

Query: 728 IVGPAVDKDVAHEAVGLKEVALVXXXXXXXXXKNPVLQIRITQKQNQPELQEYDSAKELQ 549
           I GP VDKDVAHEAVG+K   LV         KNPVLQI+I  K       E    KE +
Sbjct: 271 IAGPGVDKDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIAPKVITEHKDECSIMKESE 330

Query: 548 EPIPESSARETFATLEELNSGKLPPEEILSLPKFKNYTAGDPTPVLYIKNLAKDVVVDDF 369
           +   E    + +ATLEEL SGKLPPEEILSLP FKNY AG+P PVLYIKNLAKDVVVDDF
Sbjct: 331 DSEKEDFDLKHYATLEELKSGKLPPEEILSLPMFKNYAAGNPAPVLYIKNLAKDVVVDDF 390

Query: 368 YFIFGSFFGSVDAAKSNLIVKLMQEGRMKGQAFITFPTVELARNALSAVNGYVFKGKAVV 189
           YFIFGS FGSVDAAKS L VKLMQEGRM+GQAF+TFP+VELA +AL+ VNGYVFKGK ++
Sbjct: 391 YFIFGSLFGSVDAAKSGLSVKLMQEGRMRGQAFVTFPSVELAHHALNVVNGYVFKGKPMI 450

Query: 188 IQFGRSPAAA 159
           IQFGR+PAAA
Sbjct: 451 IQFGRNPAAA 460



 Score =  226 bits (575), Expect = 3e-56
 Identities = 127/206 (61%), Positives = 147/206 (71%), Gaps = 6/206 (2%)
 Frame = -2

Query: 1496 PIMAPMTQQLMWNXXXXXXXSAATLLVWHLPEAIPRDALTRLFSHYGASSVRPFSHGRVK 1317
            P++ P TQ            SAATLL+ HLPEAIP+D L+RLFS YGASSVRP + GR++
Sbjct: 5    PMLGPRTQSF------EAEKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPSTSGRLR 58

Query: 1316 NCAFVDFKDEMSAYQAQKQLHGLRFLGKVMSVERASKVVEGTKQQDNE---REVRKDASS 1146
            NCAFVDFK EM A QA +QL+GLRFLGKV+ VERA+K  E  KQ+      +++ K A S
Sbjct: 59   NCAFVDFKSEMLASQALRQLNGLRFLGKVLLVERANKPTEDDKQKSEALFGKDLTKPA-S 117

Query: 1145 MVKD---ASAPSHHYTGSISHASEPIAQKLGIEYPFPPHLEYAYPPPDGNILTNIVNALI 975
            ++KD   A         S   ASEPIA +LGI+YPFPPHLEY    PDGNILTNIVNALI
Sbjct: 118  LIKDFTMARDLGEGLKSSSLPASEPIAARLGIDYPFPPHLEYVXSHPDGNILTNIVNALI 177

Query: 974  AVPRFYTQVLHLMNKMNIPAPFRKAL 897
            AVPRFY QVLHLMNKMNIPAPFR AL
Sbjct: 178  AVPRFYVQVLHLMNKMNIPAPFRMAL 203


>emb|CBI36672.3| unnamed protein product [Vitis vinifera]
          Length = 263

 Score =  246 bits (627), Expect = 3e-62
 Identities = 129/190 (67%), Positives = 144/190 (75%)
 Frame = -2

Query: 728 IVGPAVDKDVAHEAVGLKEVALVXXXXXXXXXKNPVLQIRITQKQNQPELQEYDSAKELQ 549
           I GP VDKDVAHEAVG+K   LV         KNPVLQI+I  K       E    KE +
Sbjct: 71  IAGPGVDKDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIAPKVITEHKDECSIMKESE 130

Query: 548 EPIPESSARETFATLEELNSGKLPPEEILSLPKFKNYTAGDPTPVLYIKNLAKDVVVDDF 369
           +   E    + +ATLEEL SGKLPPEEILSLP FKNY AG+P PVLYIKNLAKDVVVDDF
Sbjct: 131 DSEKEDFDLKHYATLEELKSGKLPPEEILSLPMFKNYAAGNPAPVLYIKNLAKDVVVDDF 190

Query: 368 YFIFGSFFGSVDAAKSNLIVKLMQEGRMKGQAFITFPTVELARNALSAVNGYVFKGKAVV 189
           YFIFGS FGSVDAAKS L VKLMQEGRM+GQAF+TFP+VELA +AL+ VNGYVFKGK ++
Sbjct: 191 YFIFGSLFGSVDAAKSGLSVKLMQEGRMRGQAFVTFPSVELAHHALNVVNGYVFKGKPMI 250

Query: 188 IQFGRSPAAA 159
           IQFGR+PAAA
Sbjct: 251 IQFGRNPAAA 260


>ref|XP_002325403.1| predicted protein [Populus trichocarpa] gi|222862278|gb|EEE99784.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score =  233 bits (594), Expect = 2e-58
 Identities = 121/177 (68%), Positives = 139/177 (78%), Gaps = 3/177 (1%)
 Frame = -2

Query: 1427 TLLVWHLPEAIPRDALTRLFSHYGASSVRPFSHGRVKNCAFVDFKDEMSAYQAQKQLHGL 1248
            TLL+ HLPEAIP   L+RLFSHYGA SVRP + GR+KNCAFVDFK E  AYQA  QL+GL
Sbjct: 37   TLLIKHLPEAIPFKTLSRLFSHYGAVSVRPCNSGRLKNCAFVDFKSESLAYQAHTQLNGL 96

Query: 1247 RFLGKVMSVERASKVVEGTKQQDNEREVRKDASSMVKDASAPSHHYTGSISH---ASEPI 1077
             FLGKV+SVERASK+ E  + +++        +S+++DAS P     GS      ASEPI
Sbjct: 97   SFLGKVLSVERASKLSEAQQGKESV-----PPTSLIEDASVPRDVGDGSKFRSFPASEPI 151

Query: 1076 AQKLGIEYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFR 906
            A +LG++YPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFR
Sbjct: 152  APRLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFR 208



 Score =  168 bits (426), Expect = 5e-39
 Identities = 95/166 (57%), Positives = 105/166 (63%)
 Frame = -2

Query: 728 IVGPAVDKDVAHEAVGLKEVALVXXXXXXXXXKNPVLQIRITQKQNQPELQEYDSAKELQ 549
           IVGPA DKD+ HEAVGLK   LV         KNPVLQ   TQ                 
Sbjct: 280 IVGPAADKDIVHEAVGLKPAFLVPKEIPVIKKKNPVLQNLRTQ----------------- 322

Query: 548 EPIPESSARETFATLEELNSGKLPPEEILSLPKFKNYTAGDPTPVLYIKNLAKDVVVDDF 369
                     T    EE+ S +L PEEILSLPKFKNYT G P PVLYIKNL K+VV DDF
Sbjct: 323 ----------TKRVAEEIESKRLAPEEILSLPKFKNYTVGKPAPVLYIKNLDKEVVFDDF 372

Query: 368 YFIFGSFFGSVDAAKSNLIVKLMQEGRMKGQAFITFPTVELARNAL 231
           ++IFGS FGS+DAAKS L VKLMQEGRM+GQAF+TFP+VELA  AL
Sbjct: 373 FYIFGSLFGSIDAAKSGLSVKLMQEGRMRGQAFVTFPSVELAHQAL 418


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