BLASTX nr result

ID: Salvia21_contig00014577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00014577
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   209   9e-52
ref|XP_003602847.1| Multiple RNA-binding domain-containing prote...   203   5e-50
ref|XP_002306558.1| predicted protein [Populus trichocarpa] gi|2...   201   2e-49
emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]   201   3e-49
ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   201   3e-49

>ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449497014|ref|XP_004160289.1| PREDICTED: 31
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 300

 Score =  209 bits (532), Expect = 9e-52
 Identities = 122/258 (47%), Positives = 159/258 (61%)
 Frame = -1

Query: 917 ATSHTHLPLPNHRLLLSVGSRPRKSNLHLFLNAPLRALPAIQSQITAESEDEVSTTRLLV 738
           +TS +H PL        +  R ++++  +F  A      A+ S    E   E S TRLL 
Sbjct: 55  STSISHSPL--------ISIRAKRTSTFVFQFASTSQDEAVSSPSDTE---EFSQTRLLA 103

Query: 737 QNVPWTSTEDDLRPLFQKXXXXXXGTVVEIEVSFPILFVFPSSFLVSHFVFLKFSMYNKE 558
           QNVPW ST +D+R LF+K      GTV+++E+S                      MYNK 
Sbjct: 104 QNVPWDSTPEDIRSLFEKY-----GTVLDVELS----------------------MYNKI 136

Query: 557 RNRGLAFVTMGSPDEALAAFNSLEASEFEGRVLKLNWAXXXXXXXXXXXXXXKAVHNLFV 378
           RNRGLAFVTMGSP+EALAA N+LE+ EFEGR L+LN+A                  NLFV
Sbjct: 137 RNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFV 196

Query: 377 TFLPFQARSKDLKEFFNAHNANAVSAEIIFRDNPRRSAGYGFVSFNTKAEADAALAAFQG 198
             LPF AR+KDLKEFF++ + N VSA+IIF +NPRRS+GYGFV+F TK +A+AA++ FQG
Sbjct: 197 ANLPFDARAKDLKEFFDSGSGNVVSAQIIFNENPRRSSGYGFVAFKTKKDAEAAISEFQG 256

Query: 197 KEFMGRTLRVAPSKRFLR 144
           K FMGR+LRVA SK+F++
Sbjct: 257 KTFMGRSLRVARSKQFVK 274


>ref|XP_003602847.1| Multiple RNA-binding domain-containing protein [Medicago
           truncatula] gi|355491895|gb|AES73098.1| Multiple
           RNA-binding domain-containing protein [Medicago
           truncatula]
          Length = 290

 Score =  203 bits (517), Expect = 5e-50
 Identities = 112/236 (47%), Positives = 148/236 (62%), Gaps = 3/236 (1%)
 Frame = -1

Query: 824 NAPLRALPAIQSQITAESE-DEVSTTRLLVQNVPWTSTEDDLRPLFQKXXXXXXGTVVEI 648
           N+ LR     + Q+T + + +E+STTRLL QNVPW+ST +D+R LF+K      G V+ +
Sbjct: 64  NSTLRFASTSEQQVTTQEQTEELSTTRLLAQNVPWSSTTEDVRSLFEKY-----GKVLHV 118

Query: 647 EVSFPILFVFPSSFLVSHFVFLKFSMYNKERNRGLAFVTMGSPDEALAAFNSLEASEFEG 468
           E+S                      MYNK RNRGLAFV MGSP+EA  A NSL++ EF+G
Sbjct: 119 ELS----------------------MYNKNRNRGLAFVEMGSPEEASEALNSLQSYEFDG 156

Query: 467 RVLKLNWAXXXXXXXXXXXXXXKAVHNLFVTFLPFQARSKDLKEFFNAHNANAVSAEIIF 288
           R++ + +A                 +NLFV   P++ARSKD+KEFF++     VSAE+IF
Sbjct: 157 RIINIQYAKPKKEKIPPPVERKPITYNLFVANFPYEARSKDVKEFFDSGTGKVVSAEVIF 216

Query: 287 RDNPRRSAGYGFVSFNTKAEADAALAAFQGKEFMGRTLRVAPSKRF--LRQETAAT 126
            +NPRR +GYGFVS+ +K EAD ALA FQGK FMGR LRVAPSKRF  L +E+A +
Sbjct: 217 HENPRRPSGYGFVSYKSKKEADEALAEFQGKNFMGRPLRVAPSKRFVQLAEESAGS 272


>ref|XP_002306558.1| predicted protein [Populus trichocarpa] gi|222856007|gb|EEE93554.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  201 bits (512), Expect = 2e-49
 Identities = 113/213 (53%), Positives = 136/213 (63%), Gaps = 1/213 (0%)
 Frame = -1

Query: 776 ESEDEVSTTRLLVQNVPWTSTEDDLRPLFQKXXXXXXGTVVEIEVSFPILFVFPSSFLVS 597
           E E+E S TRL   NVPW  T +D+R LFQK      GTVV++E+S              
Sbjct: 96  EKEEEFSKTRLFASNVPWNCTAEDIRALFQKF-----GTVVDVELS-------------- 136

Query: 596 HFVFLKFSMYNKERNRGLAFVTMGSPDEALAAFNSLEASEFEGRVLKLNWAXXXXXXXXX 417
                   MY+K RNRGLAFVTMGSP+EA+AA N+LE+ EFEGR LK+N+A         
Sbjct: 137 --------MYSKIRNRGLAFVTMGSPEEAVAALNNLESYEFEGRTLKMNYAKAKKKKPSP 188

Query: 416 XXXXXKA-VHNLFVTFLPFQARSKDLKEFFNAHNANAVSAEIIFRDNPRRSAGYGFVSFN 240
                     NLFV  LPF+A+SKDLKEFF A  AN VSAEIIF DNPRR +GYGFV+F 
Sbjct: 189 PPPPKPGPTFNLFVANLPFEAKSKDLKEFFIAEGANVVSAEIIFHDNPRRPSGYGFVAFK 248

Query: 239 TKAEADAALAAFQGKEFMGRTLRVAPSKRFLRQ 141
           TK EAD A++ F  KEFMGR LRVA S++F++Q
Sbjct: 249 TKKEADYAISTFSDKEFMGRQLRVARSRQFVKQ 281


>emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
          Length = 294

 Score =  201 bits (511), Expect = 3e-49
 Identities = 126/299 (42%), Positives = 171/299 (57%), Gaps = 23/299 (7%)
 Frame = -1

Query: 947 AAFRILYFPPATSH-THLPL--PNHRLLLSVGS-----------RPRKSNL-HLFLNAPL 813
           A  R L FP  TS  T  PL  P H +L    S             R+ NL H+  +A  
Sbjct: 2   ALLRHLCFPSTTSFLTXQPLQKPLHSILSFSSSFSPLSHALPLRXTRRINLFHVSASAQT 61

Query: 812 RALPAIQSQITA-------ESEDEVSTTRLLVQNVPWTSTEDDLRPLFQKXXXXXXGTVV 654
           ++ P               + E+E S TRL+ QN+PWT T  D+R LF+K      GTV+
Sbjct: 62  QSPPPASPSTAVTVDTPQNDEEEEFSRTRLIAQNIPWTCTAQDIRSLFEKY-----GTVL 116

Query: 653 EIEVSFPILFVFPSSFLVSHFVFLKFSMYNKERNRGLAFVTMGSPDEALAAFNSLEASEF 474
           ++E+S                      M+NK RNRGLAF++MGSP+EALAA ++LE+ E 
Sbjct: 117 DVELS----------------------MHNKTRNRGLAFISMGSPEEALAALSNLESYEL 154

Query: 473 EGRVLKLNWAXXXXXXXXXXXXXXKAV-HNLFVTFLPFQARSKDLKEFFNAHNANAVSAE 297
           EGR +K+N+A                  +NLF+  LP+QAR+KDL+EFF++ N N VSAE
Sbjct: 155 EGRAIKVNYANPQKKKPSSPIQHKPVTPYNLFIANLPYQARAKDLREFFSSGNCNVVSAE 214

Query: 296 IIFRDNPRRSAGYGFVSFNTKAEADAALAAFQGKEFMGRTLRVAPSKRFLRQETAATIQ 120
           +IF +NPRRS+GYGFVSF +K EAD AL++FQG+ FMGR LRVA S+RF+++E   + Q
Sbjct: 215 VIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVARSRRFVKRENKMSDQ 273


>ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|302142004|emb|CBI19207.3| unnamed protein product
           [Vitis vinifera]
          Length = 294

 Score =  201 bits (510), Expect = 3e-49
 Identities = 126/299 (42%), Positives = 171/299 (57%), Gaps = 23/299 (7%)
 Frame = -1

Query: 947 AAFRILYFPPATSH-THLPL--PNHRLLLSVGS-----------RPRKSNL-HLFLNAPL 813
           A  R L FP  TS  T  PL  P H +L    S             R+ NL H+  +A  
Sbjct: 2   ALLRHLCFPSTTSFLTPQPLQKPLHSILSFSSSFSPLSHALPLRTTRRINLFHVSASAQT 61

Query: 812 RALPAIQSQITA-------ESEDEVSTTRLLVQNVPWTSTEDDLRPLFQKXXXXXXGTVV 654
           ++ P               + E+E S TRL+ QN+PWT T  D+R LF+K      GTV+
Sbjct: 62  QSPPPASPSTAVTVDTPQNDEEEEFSRTRLIAQNIPWTCTAQDIRSLFEKY-----GTVL 116

Query: 653 EIEVSFPILFVFPSSFLVSHFVFLKFSMYNKERNRGLAFVTMGSPDEALAAFNSLEASEF 474
           ++E+S                      M+NK RNRGLAF++MGSP+EALAA ++LE+ E 
Sbjct: 117 DVELS----------------------MHNKTRNRGLAFISMGSPEEALAALSNLESYEL 154

Query: 473 EGRVLKLNWAXXXXXXXXXXXXXXKAV-HNLFVTFLPFQARSKDLKEFFNAHNANAVSAE 297
           EGR +K+N+A                  +NLF+  LP+QAR+KDL+EFF++ N N VSAE
Sbjct: 155 EGRAIKVNYANPQKKKPSSPIQHKPVTPYNLFIANLPYQARAKDLREFFSSGNCNVVSAE 214

Query: 296 IIFRDNPRRSAGYGFVSFNTKAEADAALAAFQGKEFMGRTLRVAPSKRFLRQETAATIQ 120
           +IF +NPRRS+GYGFVSF +K EAD AL++FQG+ FMGR LRVA S+RF+++E   + Q
Sbjct: 215 VIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVARSRRFVKRENKMSDQ 273


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