BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00013735
         (958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringsp...   276   7e-72
ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot viru...   218   1e-55

>gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score =  276 bits (705), Expect = 7e-72
 Identities = 153/277 (55%), Positives = 187/277 (67%), Gaps = 11/277 (3%)
 Frame = -2

Query: 921 LPKRVRVCSKSTGRFFTVGRHDLHLLPSGKRAWVPLRNPTSAGGSSRKERPQRAVTKQPV 742
           LPKRVRV SK +GR FTVGRHDLH+LPSGKRAWVP+R P +AGG+ R+ERP     K   
Sbjct: 14  LPKRVRVVSKRSGRIFTVGRHDLHVLPSGKRAWVPVRAPIAAGGNFRRERPLVVSHKTQQ 73

Query: 741 VRPIRAP--VKVENRFSPLCVEE----SLVAPTKSKITYADVVRAK--VSPAKAKRGVVT 586
           VRPIR P  VK  NRF+PL V+E    ++ AP   K +YAD +R+   V P+  ++GVVT
Sbjct: 74  VRPIRMPAAVKTSNRFAPLSVKEGVTAAVAAPINPKKSYADALRSSAFVKPS-VRKGVVT 132

Query: 585 LIETSRDFKLFED---LPEPVAIPGQTPQEAASLSREFAKRALVFSGRRLMPVGLPEDHS 415
           L+ET +DF LF D     + V  PGQT  EA +L REF KR L FSGRRL   GLP    
Sbjct: 133 LVETEKDFALFGDEFTQNQVVPCPGQTLPEAEALQREFHKRTLAFSGRRLSVSGLPS--G 190

Query: 414 TDPFASPLPRGPVPARRVVHVEPFTWDNMSYGQCSRTLALYKQLTSCFGSKMFQATLYKE 235
           +DPFASP P  P    +V HV+P +W+ MS+GQCSR L LYKQL SCFG KMF ++LY  
Sbjct: 191 SDPFASPSPVRPALTPKVAHVDPVSWEGMSFGQCSRALTLYKQLCSCFGVKMFSSSLYGM 250

Query: 234 AVKKVCKLTDAVPVSIPEFMGRLGQVDFGAAPAHVYV 124
           AV+KV +L +  PV+IPE   RLGQVD  A   H++V
Sbjct: 251 AVRKVLRLREDFPVAIPENFARLGQVDRDARAVHLFV 287


>ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           gi|478364|pir||JQ2018 hypothetical 36.5K protein -
           strawberry latent ringspot virus
           gi|312511|emb|CAA49480.1| 36 kDa protein [Strawberry
           latent ringspot virus satellite RNA]
          Length = 331

 Score =  218 bits (556), Expect(2) = 1e-55
 Identities = 133/249 (53%), Positives = 158/249 (63%), Gaps = 12/249 (4%)
 Frame = -2

Query: 921 LPKRVRVCSKSTGRFFTVGRHDLHLLPSGKRAWVPLRNPTSAGGSSRKERPQRAVTKQPV 742
           LPKRVRV SK   R FTVGRHDLH+LPSGKRAWVP+R P +AGGS R+ERP     K   
Sbjct: 14  LPKRVRVISKRRARIFTVGRHDLHVLPSGKRAWVPVRAPIAAGGSFRRERPPVVSHKTQQ 73

Query: 741 VRPIRAP--VKVENRFSPLCVEE---SLVAP-TKSKITYADVVR--AKVSPAKAKRGVVT 586
           VRPIR P  VK  NRF+ L V+E     VAP    K +YAD +R  A V P+ A++GVVT
Sbjct: 74  VRPIRTPTAVKTSNRFASLSVKEEAPEAVAPFNPKKKSYADALRSSAFVKPS-ARKGVVT 132

Query: 585 LIETSRDFKLFED---LPEPVAIPGQTPQEAASLSREFAKRALVFSGRRLMPVGLPEDHS 415
           L+ET +DF LF D     + V  PGQT  EA SL REF KRA  FSG+RL   GLPE   
Sbjct: 133 LVETEKDFALFCDEFTQNQVVPCPGQTLSEAESLQREFHKRAFAFSGKRLSVSGLPE--- 189

Query: 414 TDPFASPLPR-GPVPARRVVHVEPFTWDNMSYGQCSRTLALYKQLTSCFGSKMFQATLYK 238
             P  S L R       +  HV+P +W+ MS+GQCSR L LY+QL  CFG KMF ++LY 
Sbjct: 190 -GPIPSLLLRQSACNCPKGCHVDPVSWEGMSFGQCSRALTLYRQLCGCFGMKMFSSSLYG 248

Query: 237 EAVKKVCKL 211
            AV++   L
Sbjct: 249 MAVRRFSAL 257



 Score = 25.4 bits (54), Expect(2) = 1e-55
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 134 TSTYSFCYFSSWVCAFL-GTWALFKESKVV 48
           TS YS+   S +V     GTWA FK+S ++
Sbjct: 283 TSLYSYTSSSRFVPMIRSGTWAFFKDSLII 312