BLASTX nr result

ID: Salvia21_contig00013653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00013653
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20486.3| unnamed protein product [Vitis vinifera]              283   4e-74
ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloro...   283   4e-74
sp|Q02764.1|RK24_TOBAC RecName: Full=50S ribosomal protein L24, ...   278   1e-72
ref|XP_002864348.1| 50S ribosomal protein L24, chloroplast [Arab...   266   5e-69
ref|NP_851190.1| 50S ribosomal protein L24 [Arabidopsis thaliana...   265   8e-69

>emb|CBI20486.3| unnamed protein product [Vitis vinifera]
          Length = 236

 Score =  283 bits (724), Expect = 4e-74
 Identities = 136/176 (77%), Positives = 159/176 (90%)
 Frame = -2

Query: 783 STMAALQSSFTSLNLGTSSFLGQRVTPSLHLPLVKSTEQPSSIVAKLKRWERKECKPNSL 604
           + MAALQSSFTSL+L ++SFLGQ  +P L+  L KSTE+P  IV +LKRWERKECKPNSL
Sbjct: 47  AAMAALQSSFTSLSLSSNSFLGQPFSPLLYPSLAKSTEKPCPIVMRLKRWERKECKPNSL 106

Query: 603 PVLHKMHVKLGDTVKVISGKDKGKVGEVSRIITHNSSIVIKDINLKTKHVKSKGEDEPGQ 424
           PVLHKMHVK+GDTVK+ISG++KG+ GE+S+I  HNS++V+KDINLKTKHVK +GEDEPGQ
Sbjct: 107 PVLHKMHVKVGDTVKIISGREKGRTGEISKIFRHNSTVVVKDINLKTKHVKGRGEDEPGQ 166

Query: 423 IIKIEAPIHSSNVMLYSKEKDVVSRVGHKTLDNGKRVRYLIKTGEIIDSAENWKRV 256
           IIKIEAPIHSSNVMLYSKE++V SRVGHK L+NGKRVRYLIKTGEIIDSAENW+RV
Sbjct: 167 IIKIEAPIHSSNVMLYSKEQNVASRVGHKILENGKRVRYLIKTGEIIDSAENWERV 222


>ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloroplastic isoform 1
           [Vitis vinifera] gi|359493940|ref|XP_003634697.1|
           PREDICTED: 50S ribosomal protein L24, chloroplastic
           isoform 2 [Vitis vinifera]
           gi|359493942|ref|XP_003634698.1| PREDICTED: 50S
           ribosomal protein L24, chloroplastic isoform 3 [Vitis
           vinifera] gi|147860928|emb|CAN78749.1| hypothetical
           protein VITISV_002445 [Vitis vinifera]
          Length = 191

 Score =  283 bits (724), Expect = 4e-74
 Identities = 136/176 (77%), Positives = 159/176 (90%)
 Frame = -2

Query: 783 STMAALQSSFTSLNLGTSSFLGQRVTPSLHLPLVKSTEQPSSIVAKLKRWERKECKPNSL 604
           + MAALQSSFTSL+L ++SFLGQ  +P L+  L KSTE+P  IV +LKRWERKECKPNSL
Sbjct: 2   AAMAALQSSFTSLSLSSNSFLGQPFSPLLYPSLAKSTEKPCPIVMRLKRWERKECKPNSL 61

Query: 603 PVLHKMHVKLGDTVKVISGKDKGKVGEVSRIITHNSSIVIKDINLKTKHVKSKGEDEPGQ 424
           PVLHKMHVK+GDTVK+ISG++KG+ GE+S+I  HNS++V+KDINLKTKHVK +GEDEPGQ
Sbjct: 62  PVLHKMHVKVGDTVKIISGREKGRTGEISKIFRHNSTVVVKDINLKTKHVKGRGEDEPGQ 121

Query: 423 IIKIEAPIHSSNVMLYSKEKDVVSRVGHKTLDNGKRVRYLIKTGEIIDSAENWKRV 256
           IIKIEAPIHSSNVMLYSKE++V SRVGHK L+NGKRVRYLIKTGEIIDSAENW+RV
Sbjct: 122 IIKIEAPIHSSNVMLYSKEQNVASRVGHKILENGKRVRYLIKTGEIIDSAENWERV 177


>sp|Q02764.1|RK24_TOBAC RecName: Full=50S ribosomal protein L24, chloroplastic; AltName:
           Full=CL24; Flags: Precursor gi|170273|gb|AAA34086.1|
           ribosomal protein L24 [Nicotiana tabacum]
           gi|170324|gb|AAA34114.1| ribosomal protein L24
           [Nicotiana tabacum]
          Length = 187

 Score =  278 bits (711), Expect = 1e-72
 Identities = 140/174 (80%), Positives = 153/174 (87%), Gaps = 1/174 (0%)
 Frame = -2

Query: 777 MAALQSSFTSLNLGTSSFLGQRVTPSLHLP-LVKSTEQPSSIVAKLKRWERKECKPNSLP 601
           MAALQSSF  L+   +SF GQR +P L LP LVKSTE P  I AKLKRWERKECKPNSLP
Sbjct: 1   MAALQSSFAGLS---TSFFGQRFSPPLSLPPLVKSTEGPCLIQAKLKRWERKECKPNSLP 57

Query: 600 VLHKMHVKLGDTVKVISGKDKGKVGEVSRIITHNSSIVIKDINLKTKHVKSKGEDEPGQI 421
           VLHKMHVKLGDTVK+ISG DKGKVGE++ II HNS +V+KD+NLKTKHVKS+ EDEPGQI
Sbjct: 58  VLHKMHVKLGDTVKIISGHDKGKVGEITEIIKHNSKVVVKDVNLKTKHVKSRSEDEPGQI 117

Query: 420 IKIEAPIHSSNVMLYSKEKDVVSRVGHKTLDNGKRVRYLIKTGEIIDSAENWKR 259
           +KIEAPIHSSNVMLYSKE+ V SRVGHKTLDNGKRVRYLIKTGEIIDSAENWK+
Sbjct: 118 VKIEAPIHSSNVMLYSKEQKVASRVGHKTLDNGKRVRYLIKTGEIIDSAENWKK 171


>ref|XP_002864348.1| 50S ribosomal protein L24, chloroplast [Arabidopsis lyrata subsp.
           lyrata] gi|297310183|gb|EFH40607.1| 50S ribosomal
           protein L24, chloroplast [Arabidopsis lyrata subsp.
           lyrata]
          Length = 198

 Score =  266 bits (680), Expect = 5e-69
 Identities = 131/180 (72%), Positives = 158/180 (87%), Gaps = 4/180 (2%)
 Frame = -2

Query: 783 STMAALQSSFTSLNLGT-SSFLGQRVTPSLHLPL---VKSTEQPSSIVAKLKRWERKECK 616
           +TM+ALQSSFTSL+L + SSFLGQR+   + L +   VK  E P  ++AKLKRWERKECK
Sbjct: 2   ATMSALQSSFTSLSLSSNSSFLGQRLISPISLSVASPVKPAENPCLVLAKLKRWERKECK 61

Query: 615 PNSLPVLHKMHVKLGDTVKVISGKDKGKVGEVSRIITHNSSIVIKDINLKTKHVKSKGED 436
           PNSLP+LHKMHVK GDTVKVISG+DKGK+GEV++I THNS+IVIKD+NLKTKH+KS+ E 
Sbjct: 62  PNSLPILHKMHVKFGDTVKVISGRDKGKIGEVTKIFTHNSTIVIKDVNLKTKHMKSREEG 121

Query: 435 EPGQIIKIEAPIHSSNVMLYSKEKDVVSRVGHKTLDNGKRVRYLIKTGEIIDSAENWKRV 256
           EPGQI+KIEAPIHSSNVMLYSKEKDVVSRVGHK L++G++VRYLIKTGE+ID+ E WK++
Sbjct: 122 EPGQIVKIEAPIHSSNVMLYSKEKDVVSRVGHKVLEDGQKVRYLIKTGELIDTIEKWKQL 181


>ref|NP_851190.1| 50S ribosomal protein L24 [Arabidopsis thaliana]
           gi|27735245|sp|P92959.2|RK24_ARATH RecName: Full=50S
           ribosomal protein L24, chloroplastic; AltName:
           Full=CL24; Flags: Precursor gi|9758952|dbj|BAB09339.1|
           50S ribosomal protein L24, chloroplast precursor
           [Arabidopsis thaliana] gi|21555440|gb|AAM63859.1| 50S
           ribosomal protein L24, chloroplast precursor
           [Arabidopsis thaliana] gi|25082791|gb|AAN72001.1| 50S
           ribosomal protein L24, chloroplast precursor
           [Arabidopsis thaliana] gi|30102926|gb|AAP21381.1|
           At5g54600 [Arabidopsis thaliana]
           gi|332009133|gb|AED96516.1| 50S ribosomal protein L24
           [Arabidopsis thaliana]
          Length = 198

 Score =  265 bits (678), Expect = 8e-69
 Identities = 131/178 (73%), Positives = 156/178 (87%), Gaps = 4/178 (2%)
 Frame = -2

Query: 783 STMAALQSSFTSLNLG-TSSFLGQRVTPSLHLPL---VKSTEQPSSIVAKLKRWERKECK 616
           +TM+ALQSSFTSL+L  +SSFLGQR+   + L +   VK  E P  ++AKLKRWERKECK
Sbjct: 2   ATMSALQSSFTSLSLSPSSSFLGQRLISPISLSVTSPVKPAENPCLVLAKLKRWERKECK 61

Query: 615 PNSLPVLHKMHVKLGDTVKVISGKDKGKVGEVSRIITHNSSIVIKDINLKTKHVKSKGED 436
           PNSLP+LHKMHVK GDTVKVISG+DKGK+GEV++I THNS+IVIKD+NLKTKH+KS+ E 
Sbjct: 62  PNSLPILHKMHVKFGDTVKVISGRDKGKIGEVTKIFTHNSTIVIKDVNLKTKHMKSREEG 121

Query: 435 EPGQIIKIEAPIHSSNVMLYSKEKDVVSRVGHKTLDNGKRVRYLIKTGEIIDSAENWK 262
           EPGQI+KIEAPIHSSNVMLYSKEKDVVSRVGHK L++G++VRYLIKTGE+ID+ E WK
Sbjct: 122 EPGQIVKIEAPIHSSNVMLYSKEKDVVSRVGHKVLEDGQKVRYLIKTGELIDTIEKWK 179


Top