BLASTX nr result

ID: Salvia21_contig00012578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00012578
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16
ref|XP_002511921.1| pentatricopeptide repeat-containing protein,...    85   6e-15
ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi...    82   4e-14
ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13

>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
           gi|297745328|emb|CBI40408.3| unnamed protein product
           [Vitis vinifera]
          Length = 765

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/63 (63%), Positives = 47/63 (74%)
 Frame = +3

Query: 3   TYNALFKGLQQRNWSEKALQFMKQMIEQECVPDYSTMEILTEWLSAAGETEKLKEFVRAY 182
           T+NA+FKGLQ++NW  KA + M +M E  C PDY TMEILTEWLSA GET KLK FV+ Y
Sbjct: 699 TFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGY 758

Query: 183 RAS 191
             S
Sbjct: 759 EVS 761


>ref|XP_002511921.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549101|gb|EEF50590.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 248

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 38/55 (69%), Positives = 46/55 (83%)
 Frame = +3

Query: 3   TYNALFKGLQQRNWSEKALQFMKQMIEQECVPDYSTMEILTEWLSAAGETEKLKE 167
           TYNA+FKGL++R W  +AL+ M +M+EQ C PDY TMEILTEWLSA GETEKLK+
Sbjct: 189 TYNAMFKGLRERKWLNQALELMDRMMEQPCNPDYITMEILTEWLSAVGETEKLKK 243


>ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
           gi|449475521|ref|XP_004154479.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 39/76 (51%), Positives = 51/76 (67%)
 Frame = +3

Query: 3   TYNALFKGLQQRNWSEKALQFMKQMIEQECVPDYSTMEILTEWLSAAGETEKLKEFVRAY 182
           TYN++FK L+ +NW +KA + M +M+EQ C PDY TMEILTEWLSA GE  KLK+F +  
Sbjct: 548 TYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITKLKKFTQGC 607

Query: 183 RASDPTV*SFTVRGES 230
                 V S ++ G S
Sbjct: 608 MNRTEDVSSSSIGGYS 623


>ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|222861600|gb|EEE99142.1|
           predicted protein [Populus trichocarpa]
          Length = 775

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/66 (59%), Positives = 45/66 (68%)
 Frame = +3

Query: 3   TYNALFKGLQQRNWSEKALQFMKQMIEQECVPDYSTMEILTEWLSAAGETEKLKEFVRAY 182
           TYNA+FKGL+     EK  +FM +MIE  C PDY TMEILTEWLSA GE E+LK+FV   
Sbjct: 702 TYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGC 761

Query: 183 RASDPT 200
             S  T
Sbjct: 762 EVSSST 767


>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/63 (55%), Positives = 45/63 (71%)
 Frame = +3

Query: 3   TYNALFKGLQQRNWSEKALQFMKQMIEQECVPDYSTMEILTEWLSAAGETEKLKEFVRAY 182
           TYNA+ KG++ +    KA + M +M+E+ C PDY TME+LTEWLSA GE EKLK FV  Y
Sbjct: 676 TYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGY 735

Query: 183 RAS 191
           + S
Sbjct: 736 QDS 738


Top