BLASTX nr result

ID: Salvia21_contig00012210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00012210
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17930.3| unnamed protein product [Vitis vinifera]              339   6e-91
ref|XP_002275197.2| PREDICTED: protein OSB2, chloroplastic [Viti...   337   3e-90
ref|XP_002302076.1| predicted protein [Populus trichocarpa] gi|2...   323   4e-86
ref|XP_002306816.1| predicted protein [Populus trichocarpa] gi|2...   321   2e-85
ref|XP_002520978.1| single-stranded DNA-binding protein, ssb, pu...   318   9e-85

>emb|CBI17930.3| unnamed protein product [Vitis vinifera]
          Length = 286

 Score =  339 bits (869), Expect = 6e-91
 Identities = 163/258 (63%), Positives = 197/258 (76%), Gaps = 2/258 (0%)
 Frame = -3

Query: 937 SRIKCSF--DYSGANNNNGIYEYERYAAAGPQYPRPSEIQWKKELCNSVQLIGVVGAPVQ 764
           ++++CS   +Y+  ++N  +            YPRPSE+ WKKELCNSV LIG+VGAPV+
Sbjct: 44  TQLRCSIICNYNNDHHNQAV-----------SYPRPSEVPWKKELCNSVSLIGIVGAPVE 92

Query: 763 IKHLASGKVVGWSRLAVKKSQTDTIWINLTFWDELAHIASQHVEKGQQIHVSGRLVSDTV 584
           IKHL+SGKV+ W+RLAV+KS +DT WINLTFWDELAH+ASQHVEKGQQI+VSGRLVSDTV
Sbjct: 93  IKHLSSGKVLAWTRLAVRKSASDTTWINLTFWDELAHVASQHVEKGQQIYVSGRLVSDTV 152

Query: 583 ENDDGKQQTYYKVVVQHLNFIEKSPSPVPLYNGDSNSATPGKXXXXXXXXXXXSTEELWQ 404
           END+GKQQTYYKVVVQ LNF+E+S S       +SNS   G+           S EELWQ
Sbjct: 153 ENDEGKQQTYYKVVVQQLNFVERSFSSA----DESNSLAAGRKLGSPATNSTGSIEELWQ 208

Query: 403 AFFANPMEWWDNRKNKRSPNYPDFKHKDTGEALWVEGRYNPPWVKSQLAVLDSKMESFNE 224
           AFFANP++WWDNRK K++P YPDFKHKDTGEALWVEGRYNP WVKSQLA+LDS+MESF +
Sbjct: 209 AFFANPVDWWDNRKTKKNPKYPDFKHKDTGEALWVEGRYNPSWVKSQLAILDSRMESFRD 268

Query: 223 QSSSTHVSFMSADSLGSF 170
           Q +  HV+ M+ D    F
Sbjct: 269 QDARMHVNLMAGDDFMPF 286


>ref|XP_002275197.2| PREDICTED: protein OSB2, chloroplastic [Vitis vinifera]
          Length = 292

 Score =  337 bits (863), Expect = 3e-90
 Identities = 163/260 (62%), Positives = 196/260 (75%), Gaps = 4/260 (1%)
 Frame = -3

Query: 937 SRIKCSF--DYSGANNNNGIYEYERYAAAGPQYPRPSEIQWKKELCNSVQLIGVVGAPVQ 764
           ++++CS   +Y+  ++N  +            YPRPSE+ WKKELCNSV LIG+VGAPV+
Sbjct: 44  TQLRCSIICNYNNDHHNQAV-----------SYPRPSEVPWKKELCNSVSLIGIVGAPVE 92

Query: 763 IKHLASGKVVGWSRLAVKKSQTDTIWINLTFWDELAHIASQHVEKGQQIHVSGRLVSDTV 584
           IKHL+SGKV+ W+RLAV+KS +DT WINLTFWDELAH+ASQHVEKGQQI+VSGRLVSDTV
Sbjct: 93  IKHLSSGKVLAWTRLAVRKSASDTTWINLTFWDELAHVASQHVEKGQQIYVSGRLVSDTV 152

Query: 583 ENDDGKQQTYYKVVVQHLNFIEKSPSPVPLYN--GDSNSATPGKXXXXXXXXXXXSTEEL 410
           END+GKQQTYYKVVVQ LNF+E+S S     N     NS   G+           S EEL
Sbjct: 153 ENDEGKQQTYYKVVVQQLNFVERSFSSADESNSLAAGNSTFSGRKLGSPATNSTGSIEEL 212

Query: 409 WQAFFANPMEWWDNRKNKRSPNYPDFKHKDTGEALWVEGRYNPPWVKSQLAVLDSKMESF 230
           WQAFFANP++WWDNRK K++P YPDFKHKDTGEALWVEGRYNP WVKSQLA+LDS+MESF
Sbjct: 213 WQAFFANPVDWWDNRKTKKNPKYPDFKHKDTGEALWVEGRYNPSWVKSQLAILDSRMESF 272

Query: 229 NEQSSSTHVSFMSADSLGSF 170
            +Q +  HV+ M+ D    F
Sbjct: 273 RDQDARMHVNLMAGDDFMPF 292


>ref|XP_002302076.1| predicted protein [Populus trichocarpa] gi|222843802|gb|EEE81349.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score =  323 bits (828), Expect = 4e-86
 Identities = 158/249 (63%), Positives = 185/249 (74%)
 Frame = -3

Query: 931 IKCSFDYSGANNNNGIYEYERYAAAGPQYPRPSEIQWKKELCNSVQLIGVVGAPVQIKHL 752
           +KCS D+   + +  +            + +P+EIQW KELCNSV LIG+VG PV+IKHL
Sbjct: 50  LKCSIDFRDNHYSQTV-----------THAKPAEIQWNKELCNSVHLIGIVGIPVEIKHL 98

Query: 751 ASGKVVGWSRLAVKKSQTDTIWINLTFWDELAHIASQHVEKGQQIHVSGRLVSDTVENDD 572
            SGKVV W+RLAVKKS TDT WINLTFWDELA + SQHVEKGQQI+VSGRL+SD+VENDD
Sbjct: 99  PSGKVVAWTRLAVKKSATDTSWINLTFWDELAQVVSQHVEKGQQIYVSGRLISDSVENDD 158

Query: 571 GKQQTYYKVVVQHLNFIEKSPSPVPLYNGDSNSATPGKXXXXXXXXXXXSTEELWQAFFA 392
           GK QTYYKVVVQ LNFIE+S SP  LY+   N+   G+           STEE WQAFFA
Sbjct: 159 GKLQTYYKVVVQQLNFIERS-SPTGLYDRGFNNMEAGRKFGNNTANDMGSTEERWQAFFA 217

Query: 391 NPMEWWDNRKNKRSPNYPDFKHKDTGEALWVEGRYNPPWVKSQLAVLDSKMESFNEQSSS 212
           +P+EWWDNRK+KR+P YPDFKHKDTGEALWVEGRYNP WVKSQLA+LD +M S  +Q S 
Sbjct: 218 SPLEWWDNRKDKRNPKYPDFKHKDTGEALWVEGRYNPSWVKSQLAILDERMGSLRDQDSK 277

Query: 211 THVSFMSAD 185
             +S MS D
Sbjct: 278 LRLSSMSGD 286


>ref|XP_002306816.1| predicted protein [Populus trichocarpa] gi|222856265|gb|EEE93812.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score =  321 bits (822), Expect = 2e-85
 Identities = 156/249 (62%), Positives = 182/249 (73%)
 Frame = -3

Query: 931 IKCSFDYSGANNNNGIYEYERYAAAGPQYPRPSEIQWKKELCNSVQLIGVVGAPVQIKHL 752
           +KCS DY     +  +            + +P+EIQW KELCNSV LIG+VG PV+IKHL
Sbjct: 50  LKCSADYRDNQYSQAV-----------THAKPAEIQWNKELCNSVHLIGIVGTPVEIKHL 98

Query: 751 ASGKVVGWSRLAVKKSQTDTIWINLTFWDELAHIASQHVEKGQQIHVSGRLVSDTVENDD 572
            SGKVV W+RLAVKKS  DT WINLTFWD+LA ++SQHVEKG QI+VSGRL++D+VEND+
Sbjct: 99  PSGKVVAWTRLAVKKSANDTSWINLTFWDDLAQVSSQHVEKGHQIYVSGRLITDSVENDE 158

Query: 571 GKQQTYYKVVVQHLNFIEKSPSPVPLYNGDSNSATPGKXXXXXXXXXXXSTEELWQAFFA 392
           GK QTYYKVVVQ LNFIE+S S   LY+ D N+   G            S EE WQAFFA
Sbjct: 159 GKLQTYYKVVVQQLNFIERSSSR-GLYDSDFNNTAAGSKFGNNTANDMGSMEERWQAFFA 217

Query: 391 NPMEWWDNRKNKRSPNYPDFKHKDTGEALWVEGRYNPPWVKSQLAVLDSKMESFNEQSSS 212
           NP+EWWDNRK+KR+P YPDFKHKDTGEALWVEGRYNPPWVKSQLA+LD +M S  +Q S 
Sbjct: 218 NPLEWWDNRKDKRNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLAILDGQMGSLQDQDSR 277

Query: 211 THVSFMSAD 185
            H S MS D
Sbjct: 278 LHESSMSGD 286


>ref|XP_002520978.1| single-stranded DNA-binding protein, ssb, putative [Ricinus
           communis] gi|223539815|gb|EEF41395.1| single-stranded
           DNA-binding protein, ssb, putative [Ricinus communis]
          Length = 285

 Score =  318 bits (816), Expect = 9e-85
 Identities = 159/256 (62%), Positives = 184/256 (71%), Gaps = 2/256 (0%)
 Frame = -3

Query: 931 IKCSFDYSGANNNNGIYEYERYAAAGPQYPRPSEIQWKKELCNSVQLIGVVGAPVQIKHL 752
           +KCSFDY+ A                 QY +P+EI WKK+LCNSV LIG VGAPV+IKHL
Sbjct: 47  LKCSFDYNQA----------------AQYAKPTEIPWKKDLCNSVNLIGNVGAPVEIKHL 90

Query: 751 ASGKVVGWSRLAVKKSQTDTIWINLTFWDELAHIASQHVEKGQQIHVSGRLVSDTVENDD 572
            SGKVV W+RLAVK+S  +T WINLTFWD+LA IA QHVEKG QI+V+GRLVSD VEN++
Sbjct: 91  PSGKVVAWTRLAVKRSAAETTWINLTFWDDLAQIAFQHVEKGHQIYVAGRLVSDVVENEE 150

Query: 571 GKQQTYYKVVVQHLNFIEKSPSPVPLYNGDSNS--ATPGKXXXXXXXXXXXSTEELWQAF 398
           GKQQTYYKVVVQ LNFIE+S    P    DS+     PG+           +T ELWQAF
Sbjct: 151 GKQQTYYKVVVQQLNFIERSSYSAPSSYRDSDGMIPIPGRKFGNNAASGLNAT-ELWQAF 209

Query: 397 FANPMEWWDNRKNKRSPNYPDFKHKDTGEALWVEGRYNPPWVKSQLAVLDSKMESFNEQS 218
           FANP++WWDNRKNKR+P YPDFKHKDTGEALWVEGRYNPPWVKSQLAVLD +M S  +Q 
Sbjct: 210 FANPLDWWDNRKNKRNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLAVLDERMGSLRDQD 269

Query: 217 SSTHVSFMSADSLGSF 170
              HVS ++ D    F
Sbjct: 270 DRMHVSSIAGDDFMPF 285


Top